iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111877

Ensembl Protein ID

Solyc01g102760.2.1

UniProt Accession

C9EID2; C9EID2_SOLLC

Genbank Protein ID

ACV91879.1

Protein Name

Putative alfin-like transcription factor

Genbank Nucleotide ID

GQ848314

Gene Name

fin1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g102760.2	Solyc01g102760.2.1	Solyc01g102760.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-08	35.9	193	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrsk 54
           + C  Cg+++++++  ++C++C++wfH +C+k++   + +  +++ Cp+C+sk
   Q: 193  TLCGACGDNYATDEFWICCDICERWFHGKCVKIT-PAKAEHIKQYKCPSCSSK 244
           579***********99******************.888888888******975 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MENTVPRTVE EVFNDFKGRR AGLIKALTTD VEKFYQSCDP EKENLCLYGL PNETWEVNLP 60
VEEVPPELPE PALGINFARD GMQEKDWLSL VAVHSDSWLL SVAFYFGARF GFGKSERKRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCACCCCA CTTTCCTCTT TCTTCATGCT CTTCTCTCTC TCTCTCTATA TATCCGTTTC 60
TTACAATTTC TCTACTTGCT TCTCACAATT TCTCATGAAA ATTTGAGCTT TTCTCTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

sly:100316896

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015206	Brassica oleracea	74.49	1.00e-86	311.00
IUUC-Bra-016659	Brassica rapa	74.90	4.00e-87	313.00
IUUC-Tca-121742	Theobroma cacao	78.35	4.00e-90	323.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence