iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091228

UUCD1 version

UUC-PaT-00852

Ensembl Protein ID

ENSPTRP00000038869.3

UniProt Accession

H2QZE1; H2QZE1_PANTR

Genbank Protein ID

JAA00810.1; JAA00811.1; JAA15032.1; JAA15033.1; JAA30631.1; JAA30632.1; JAA36071.1; JAA36072.1

Protein Name

SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1

Genbank Nucleotide ID

AACZ03030134; GABC01010527; GABF01007113; GABF01007112; GABD01002469; GABD01002468; GABE01008668; GABE01008667

Gene Name

SMARCAD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000023126.4	ENSPTRT00000050553.3	ENSPTRP00000038869.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	44.84	9.00e-125	442.00	IUUC-Sce-106399

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MNLFNLDRFR FEKRNKIEEA PEATPQPSQP GPSSPISLSA EEENAEGEVS RANTPDSDIT 60
EKTEDSSVPE TPDNERKASI SYFKNQRGIQ YIDLSSDSED VVSPNCSNTV QEKTFNKDTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTCAACTT CCGGGCGGAT GCCCGCCAGC ACGGCCTCCG CCGCTCCCCT TCTTTGGCCC 60
CTTTGTGTCC CCGCAGTGTC GAGGCGCGGG CCCTGGCAGG TCCTTTCTCG AGGCAGGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003892--CUE
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51140--CUE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0000792--C:heterochromatin
GO:0043596--C:nuclear replication fork
GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0051304--P:chromosome separation
GO:0000729--P:DNA double-strand break processing
GO:0070932--P:histone H3 deacetylation
GO:0070933--P:histone H4 deacetylation
GO:0000018--P:regulation of DNA recombination

KEGG

ptr:461384

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000567	Aegilops tauschii	38.11	1.00e-99	357.00
IUUC-Aml-002063	Ailuropoda melanoleuca	96.11	0.00e+00	1917.00
IUUC-Atr-003078	Amborella trichopoda	35.75	7.00e-105	375.00
IUUC-Apl-003860	Anas platyrhynchos	71.75	0.00e+00	1379.00
IUUC-Aca-004485	Anolis carolinensis	69.31	0.00e+00	1387.00
IUUC-Aly-006561	Arabidopsis lyrata	38.97	3.00e-105	376.00
IUUC-Ath-006832	Arabidopsis thaliana	39.32	1.00e-106	380.00
IUUC-Ago-007758	Ashbya gossypii	45.86	1.00e-134	474.00
IUUC-Acl-008226	Aspergillus clavatus	44.71	1.00e-133	471.00
IUUC-Afl-008556	Aspergillus flavus	45.79	4.00e-131	462.00
IUUC-Afu-008799	Aspergillus fumigatus	44.53	3.00e-133	469.00
IUUC-Ani-009127	Aspergillus nidulans	45.76	2.00e-131	463.00
IUUC-Ang-009676	Aspergillus niger	44.19	5.00e-132	465.00
IUUC-Aor-010184	Aspergillus oryzae	45.08	3.00e-132	466.00
IUUC-Ate-010559	Aspergillus terreus	37.46	2.00e-130	460.00
IUUC-Ame-011933	Astyanax mexicanus	59.97	0.00e+00	883.00
IUUC-Bta-012963	Bos taurus	94.46	0.00e+00	1879.00
IUUC-Bci-013670	Botrytis cinerea	41.44	1.00e-118	421.00
IUUC-Bdi-014286	Brachypodium distachyon	37.48	8.00e-102	365.00
IUUC-Bol-016519	Brassica oleracea	39.40	1.00e-106	380.00
IUUC-Bra-017239	Brassica rapa	39.40	2.00e-106	379.00
IUUC-Cel-018253	Caenorhabditis elegans	43.31	2.00e-139	489.00
IUUC-Cja-019465	Callithrix jacchus	97.37	0.00e+00	1937.00
IUUC-Cfa-020637	Canis familiaris	94.55	0.00e+00	1914.00
IUUC-Cpo-021822	Cavia porcellus	95.54	0.00e+00	1806.00
IUUC-Csa-023315	Chlorocebus sabaeus	99.88	0.00e+00	1685.00
IUUC-Cin-025444	Ciona intestinalis	49.92	6.00e-176	610.00
IUUC-Cgl-026383	Colletotrichum gloeosporioides	40.22	3.00e-105	376.00
IUUC-Cne-027090	Cryptococcus neoformans	36.08	1.00e-113	404.00
IUUC-Dre-028385	Danio rerio	58.67	0.00e+00	868.00
IUUC-Dno-028932	Dasypus novemcinctus	96.39	0.00e+00	1958.00
IUUC-Dse-031394	Dothistroma septosporum	36.75	4.00e-104	372.00
IUUC-Dme-031640	Drosophila melanogaster	45.54	6.00e-157	548.00
IUUC-Eca-033276	Equus caballus	97.08	0.00e+00	1975.00
IUUC-Fca-035936	Felis catus	93.97	0.00e+00	1890.00
IUUC-Fal-037636	Ficedula albicollis	67.05	0.00e+00	1328.00
IUUC-Fso-038229	Fusarium solani	35.40	1.00e-110	394.00
IUUC-Gmo-039654	Gadus morhua	57.83	0.00e+00	897.00
IUUC-Ggr-039922	Gaeumannomyces graminis	33.57	8.00e-94	338.00
IUUC-Gga-040646	Gallus gallus	67.17	0.00e+00	1385.00
IUUC-Gac-042320	Gasterosteus aculeatus	66.36	0.00e+00	806.00
IUUC-Gma-042832	Glycine max	39.06	4.00e-106	379.00
IUUC-Ggo-044875	Gorilla gorilla	90.53	0.00e+00	1828.00
IUUC-Hsa-046992	Homo sapiens	99.71	0.00e+00	1985.00
IUUC-Hvu-047408	Hordeum vulgare	38.03	3.00e-102	366.00
IUUC-Itr-047881	Ictidomys tridecemlineatus	98.73	0.00e+00	1115.00
IUUC-Kpa-049212	Komagataella pastoris	43.03	2.00e-127	450.00
IUUC-Lpe-050987	Leersia perrieri	35.19	1.00e-100	360.00
IUUC-Loc-052272	Lepisosteus oculatus	52.76	0.00e+00	1011.00
IUUC-Lma-053118	Leptosphaeria maculans	42.56	2.00e-122	434.00
IUUC-Laf-053436	Loxodonta africana	94.64	0.00e+00	1880.00
IUUC-Mcc-055209	Macaca mulatta	99.55	0.00e+00	1741.00
IUUC-Mor-056994	Magnaporthe oryzae	34.65	4.00e-95	343.00
IUUC-Mpo-057305	Magnaporthe poae	34.00	3.00e-99	356.00
IUUC-Mtr-058432	Medicago truncatula	39.60	6.00e-105	375.00
IUUC-Mla-058972	Melampsora laricipopulina	38.85	2.00e-122	433.00
IUUC-Mga-059572	Meleagris gallopavo	65.09	0.00e+00	1238.00
IUUC-Mvi-060209	Microbotryum violaceum	40.38	4.00e-141	496.00
IUUC-Mmr-061416	Microcebus murinus	93.96	0.00e+00	1138.00
IUUC-Mdo-062869	Monodelphis domestica	81.56	0.00e+00	1644.00
IUUC-Mmu-064272	Mus musculus	90.85	0.00e+00	1687.00
IUUC-Mac-064963	Musa acuminata	34.57	1.00e-94	340.00
IUUC-Mpu-065755	Mustela putorius furo	95.91	0.00e+00	1950.00
IUUC-Mlu-067604	Myotis lucifugus	93.48	0.00e+00	1877.00
IUUC-Nfi-068310	Neosartorya fischeri	44.34	1.00e-132	468.00
IUUC-Ncr-068841	Neurospora crassa	33.93	4.00e-109	389.00
IUUC-Nle-069227	Nomascus leucogenys	99.81	0.00e+00	1988.00
IUUC-Opr-071088	Ochotona princeps	87.53	0.00e+00	1358.00
IUUC-Ont-072291	Oreochromis niloticus	66.30	0.00e+00	827.00
IUUC-Oan-073460	Ornithorhynchus anatinus	84.78	0.00e+00	1376.00
IUUC-Ocu-074811	Oryctolagus cuniculus	95.81	0.00e+00	1891.00
IUUC-Oba-075463	Oryza barthii	38.08	2.00e-100	359.00
IUUC-Obr-076342	Oryza brachyantha	38.08	6.00e-103	368.00
IUUC-Ogu-078837	Oryza glumaepatula	38.08	1.00e-100	361.00
IUUC-Oin-079623	Oryza indica	38.08	7.00e-101	361.00
IUUC-Ome-081105	Oryza meridionalis	38.08	5.00e-101	362.00
IUUC-Oni-082598	Oryza nivara	38.08	1.00e-100	361.00
IUUC-Opu-084040	Oryza punctata	38.08	1.00e-100	361.00
IUUC-Oru-084219	Oryza rufipogon	38.08	5.00e-101	362.00
IUUC-Osa-085461	Oryza sativa	38.08	7.00e-101	361.00
IUUC-Ola-087307	Oryzias latipes	56.58	0.00e+00	874.00
IUUC-Olu-087812	Ostreococcus lucimarinus	39.29	3.00e-100	358.00
IUUC-Oga-089064	Otolemur garnettii	95.43	0.00e+00	1924.00
IUUC-Oar-090054	Ovis aries	97.08	0.00e+00	1912.00
IUUC-Pan-092769	Papio anubis	99.16	0.00e+00	1848.00
IUUC-Psi-093202	Pelodiscus sinensis	71.93	0.00e+00	1409.00
IUUC-Pma-094725	Petromyzon marinus	46.54	0.00e+00	879.00
IUUC-Pno-095130	Phaeosphaeria nodorum	41.75	4.00e-111	396.00
IUUC-Ppa-095559	Physcomitrella patens	40.59	5.00e-109	389.00
IUUC-Pfo-096546	Poecilia formosa	66.61	0.00e+00	835.00
IUUC-Pab-097698	Pongo abelii	99.22	0.00e+00	1974.00
IUUC-Pop-099986	Populus trichocarpa	39.54	1.00e-106	380.00
IUUC-Ppe-101649	Prunus persica	39.78	5.00e-104	372.00
IUUC-Pva-102138	Pteropus vampyrus	93.97	0.00e+00	1877.00
IUUC-Pgr-103272	Puccinia graminis	35.21	3.00e-121	429.00
IUUC-Ptt-103880	Puccinia triticina	35.96	5.00e-129	455.00
IUUC-Pte-104260	Pyrenophora teres	43.02	9.00e-119	421.00
IUUC-Pyt-104532	Pyrenophora triticirepentis	34.29	1.00e-79	291.00
IUUC-Rno-105903	Rattus norvegicus	93.18	0.00e+00	1740.00
IUUC-Sce-106399	Saccharomyces cerevisiae	44.84	1.00e-126	447.00
IUUC-Sha-106783	Sarcophilus harrisii	80.06	0.00e+00	1571.00
IUUC-Sja-107887	Schizosaccharomyces japonicus	41.16	4.00e-143	502.00
IUUC-Spo-108154	Schizosaccharomyces pombe	42.46	4.00e-148	519.00
IUUC-Smo-108759	Selaginella moellendorffii	39.93	2.00e-105	376.00
IUUC-Sit-110023	Setaria italica	37.15	2.00e-100	360.00
IUUC-Sly-111423	Solanum lycopersicum	39.10	1.00e-105	377.00
IUUC-Sbi-114688	Sorghum bicolor	37.36	6.00e-102	365.00
IUUC-Sre-114983	Sporisorium reilianum	35.75	7.00e-110	392.00
IUUC-Ssc-116030	Sus scrofa	94.66	0.00e+00	1921.00
IUUC-Tgu-117451	Taeniopygia guttata	77.93	0.00e+00	1201.00
IUUC-Tru-118600	Takifugu rubripes	66.30	0.00e+00	795.00
IUUC-Tsy-119130	Tarsius syrichta	87.35	0.00e+00	1611.00
IUUC-Tni-119758	Tetraodon nigroviridis	56.91	0.00e+00	878.00
IUUC-Tca-121797	Theobroma cacao	39.63	6.00e-107	381.00
IUUC-Tre-121883	Trichoderma reesei	40.19	9.00e-102	365.00
IUUC-Tvi-122333	Trichoderma virens	40.15	7.00e-110	391.00
IUUC-Tae-122848	Triticum aestivum	38.11	6.00e-100	358.00
IUUC-Tur-126594	Triticum urartu	38.11	1.00e-99	357.00
IUUC-Tme-127106	Tuber melanosporum	42.15	2.00e-123	437.00
IUUC-Tbe-127911	Tupaia belangeri	97.82	0.00e+00	999.00
IUUC-Ttr-128597	Tursiops truncatus	96.03	0.00e+00	1860.00
IUUC-Uma-129321	Ustilago maydis	36.32	8.00e-111	395.00
IUUC-Vpa-130686	Vicugna pacos	89.02	0.00e+00	1689.00
IUUC-Vvi-131046	Vitis vinifera	39.38	2.00e-106	380.00
IUUC-Xtr-132740	Xenopus tropicalis	65.30	0.00e+00	1144.00
IUUC-Xma-134260	Xiphophorus maculatus	56.12	0.00e+00	886.00
IUUC-Yli-134634	Yarrowia lipolytica	40.54	6.00e-138	484.00
IUUC-Zma-135493	Zea mays	36.86	3.00e-101	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence