iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098335

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01346476

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000004204.2	ENSPPYT00000004980.2	ENSPPYP00000004790.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-38	129.2	53	85
UBD/Beta-Prp	2.10e-51	174.9	46	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH ++++++++ +d +llvs+s Dg++ vWD  
   Q: 53   GHLAKIYAMHWaTDsKLLVSASQDGKLIVWDSY 85
           899*********888***************965 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            + r+l gh a+++a+ +  d+k+lv++s+D+ + vwd  t   vh++   ++ v+++++ psg++++ G+ d++  +++l++++   +
   Q: 46   RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVK 134
           55689*****************************************************************************9987777 PP
   S: 132  ...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
               ls h+g  +c ++ + +n +v++s D+t+ lWd++tg+  + + g ht++  sl+++++ + ++sg++d + klwd+++g+c +t
   Q: 135  vsrELSAHTGYLSCCRFLD-DNNIVTSSGDTTCALWDIETGQQKTVFVG-HTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQT 221
           778***************9.566899**********************9.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           ++gh++ ++ + f+p +e + +gs+D s r++dlr ++ l +++++
   Q: 222  FTGHESDINAICFFPSGEAICTGSDDASCRLFDLRADQELICFSHE 267
           ***************************************9999984 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MGEMEQLRQE AEQLKKQIAD ARKACADVTL AELVSGLEVV GRIQMRTRRT LRGHLAKIYA 60
MHWATDSKLL VSASQDGKLI VWDSYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCCAGAGC TACCCCTCGA CCTGTCAGCC ATGGGGGAGA TGGAGCAACT GCGTCAGGAA 60
GCGGAGCAGC TCAAGAAGCA GATTGCAGTA ACTCCAGAGC CCTCCCACTG GGGCCCCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030425--C:dendrite
GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

KEGG

pon:100453483

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	49.63	1.00e-75	276.00
IUUC-Aml-002370	Ailuropoda melanoleuca	96.47	0.00e+00	683.00
IUUC-Atr-002610	Amborella trichopoda	49.03	5.00e-86	311.00
IUUC-Apl-004079	Anas platyrhynchos	93.24	0.00e+00	672.00
IUUC-Aca-004539	Anolis carolinensis	90.00	0.00e+00	651.00
IUUC-Aly-006025	Arabidopsis lyrata	50.00	2.00e-83	302.00
IUUC-Ath-006617	Arabidopsis thaliana	50.65	4.00e-83	301.00
IUUC-Ate-010520	Aspergillus terreus	60.19	5.00e-109	387.00
IUUC-Bgr-012079	Blumeria graminis	65.38	6.00e-132	463.00
IUUC-Bta-012810	Bos taurus	96.76	0.00e+00	684.00
IUUC-Bci-013621	Botrytis cinerea	66.67	9.00e-132	462.00
IUUC-Bdi-014785	Brachypodium distachyon	49.68	6.00e-87	313.00
IUUC-Bol-015759	Brassica oleracea	50.80	4.00e-81	296.00
IUUC-Bra-016695	Brassica rapa	51.28	3.00e-81	295.00
IUUC-Cja-019894	Callithrix jacchus	98.53	0.00e+00	696.00
IUUC-Cfa-020140	Canis familiaris	96.18	0.00e+00	682.00
IUUC-Cpo-021908	Cavia porcellus	96.18	0.00e+00	683.00
IUUC-Csa-023321	Chlorocebus sabaeus	99.41	0.00e+00	700.00
IUUC-Dno-029783	Dasypus novemcinctus	95.18	7.00e-180	622.00
IUUC-Dse-031388	Dothistroma septosporum	66.37	2.00e-137	481.00
IUUC-Ete-032435	Echinops telfairi	89.12	4.00e-177	613.00
IUUC-Eca-034169	Equus caballus	96.47	0.00e+00	683.00
IUUC-Eeu-034631	Erinaceus europaeus	90.26	5.00e-163	566.00
IUUC-Fca-035392	Felis catus	96.18	0.00e+00	685.00
IUUC-Fal-036902	Ficedula albicollis	91.18	0.00e+00	662.00
IUUC-Gga-040655	Gallus gallus	91.79	0.00e+00	656.00
IUUC-Ggo-045346	Gorilla gorilla	99.41	0.00e+00	700.00
IUUC-Hsa-046203	Homo sapiens	99.41	0.00e+00	700.00
IUUC-Hvu-047596	Hordeum vulgare	49.68	8.00e-86	310.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	95.59	0.00e+00	679.00
IUUC-Lpe-051040	Leersia perrieri	49.36	2.00e-87	316.00
IUUC-Loc-052327	Lepisosteus oculatus	88.24	0.00e+00	642.00
IUUC-Laf-053616	Loxodonta africana	95.88	0.00e+00	681.00
IUUC-Mcc-055798	Macaca mulatta	99.41	0.00e+00	700.00
IUUC-Mga-059516	Meleagris gallopavo	93.24	0.00e+00	671.00
IUUC-Mmr-061701	Microcebus murinus	96.76	0.00e+00	686.00
IUUC-Mdo-061879	Monodelphis domestica	93.82	0.00e+00	669.00
IUUC-Mmu-063132	Mus musculus	96.47	0.00e+00	683.00
IUUC-Mac-064871	Musa acuminata	49.04	6.00e-84	304.00
IUUC-Mpu-066365	Mustela putorius furo	96.18	0.00e+00	685.00
IUUC-Mlu-067628	Myotis lucifugus	96.18	0.00e+00	682.00
IUUC-Ncr-068650	Neurospora crassa	64.62	5.00e-128	450.00
IUUC-Nle-069015	Nomascus leucogenys	97.94	0.00e+00	684.00
IUUC-Opr-070261	Ochotona princeps	97.06	0.00e+00	686.00
IUUC-Ocu-074255	Oryctolagus cuniculus	97.06	0.00e+00	686.00
IUUC-Oba-075818	Oryza barthii	47.69	2.00e-84	306.00
IUUC-Obr-076229	Oryza brachyantha	49.04	5.00e-84	305.00
IUUC-Ogl-077730	Oryza glaberrima	49.68	6.00e-88	317.00
IUUC-Ogu-078583	Oryza glumaepatula	49.23	2.00e-69	254.00
IUUC-Oin-079661	Oryza indica	49.04	5.00e-84	304.00
IUUC-Olo-080225	Oryza longistaminata	49.23	2.00e-69	254.00
IUUC-Oni-082161	Oryza nivara	49.36	2.00e-87	315.00
IUUC-Opu-084072	Oryza punctata	49.68	6.00e-88	317.00
IUUC-Oru-084316	Oryza rufipogon	49.04	5.00e-84	304.00
IUUC-Osa-085380	Oryza sativa	49.04	5.00e-84	304.00
IUUC-Oga-088685	Otolemur garnettii	97.06	0.00e+00	685.00
IUUC-Oar-089373	Ovis aries	93.84	0.00e+00	648.00
IUUC-Ptr-090627	Pan troglodytes	96.76	0.00e+00	681.00
IUUC-Pan-092347	Papio anubis	99.41	0.00e+00	699.00
IUUC-Psi-092965	Pelodiscus sinensis	93.24	0.00e+00	672.00
IUUC-Ppa-095726	Physcomitrella patens	45.05	4.00e-75	275.00
IUUC-Pop-099370	Populus trichocarpa	49.35	5.00e-87	314.00
IUUC-Ppe-102016	Prunus persica	47.74	3.00e-84	305.00
IUUC-Pva-102666	Pteropus vampyrus	97.06	0.00e+00	687.00
IUUC-Rno-105834	Rattus norvegicus	95.88	0.00e+00	647.00
IUUC-Sha-107128	Sarcophilus harrisii	93.82	0.00e+00	667.00
IUUC-Spo-108352	Schizosaccharomyces pombe	43.67	2.00e-69	255.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	66.86	2.00e-131	461.00
IUUC-Smo-109652	Selaginella moellendorffii	43.89	3.00e-74	271.00
IUUC-Sit-110441	Setaria italica	49.36	3.00e-87	315.00
IUUC-Sly-111784	Solanum lycopersicum	49.35	2.00e-84	305.00
IUUC-Stu-112400	Solanum tuberosum	49.35	2.00e-84	305.00
IUUC-Sbi-114038	Sorghum bicolor	48.72	5.00e-86	311.00
IUUC-Ssc-115886	Sus scrofa	96.76	0.00e+00	684.00
IUUC-Tgu-116461	Taeniopygia guttata	91.76	0.00e+00	665.00
IUUC-Tca-121224	Theobroma cacao	49.68	1.00e-86	313.00
IUUC-Tae-124407	Triticum aestivum	50.00	3.00e-86	311.00
IUUC-Tur-126755	Triticum urartu	49.52	1.00e-86	315.00
IUUC-Tbe-127694	Tupaia belangeri	80.59	8.00e-148	516.00
IUUC-Vvi-131162	Vitis vinifera	49.68	2.00e-86	312.00
IUUC-Xtr-132928	Xenopus tropicalis	88.82	9.00e-180	622.00
IUUC-Zma-135893	Zea mays	48.72	6.00e-86	310.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence