iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126080

Ensembl Protein ID

TRIUR3_14217-P1

UniProt Accession

M8A408; M8A408_TRIUA

Genbank Protein ID

EMS55159.1

Protein Name

Vegetative incompatibility protein HET-E-1

Genbank Nucleotide ID

KD174295

Gene Name

TRIUR3_14217

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_14217	TRIUR3_14217-T1	TRIUR3_14217-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-29	99.9	538	574
UBD/Beta-Prp	6.00e-49	167.5	435	680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           H ++vt+++  s+ +++++s+Dgt+k+WD+rt++++ 
   Q: 538  HDAPVTSVRMlSGERVLTASHDGTVKMWDVRTDTCVA 574
           999******98889********************985 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgk............ilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdl 123
            +r l gh+a++ta+ +  +++            ++++gs+D t+kvwd+s   ++   tl+gh+++v+++s+++   k+vsG++d+ + vwd 
   Q: 435  NMRILRGHTAAITALHCVTRKEvwdlvgdredagFFISGSTDCTVKVWDPSlrGSELRATLRGHTRTVRAISSDR--GKIVSGGDDQSVIVWDK 526
           4677777777744444444444444444444457**************766669*********************..***************** PP
   S: 124  etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
           +  + le  l+ hd+ v++v++ + g  + ++s D+tv++Wd++t++++ t     +++v ++++d++   l+++++d    +wd+++++ + +
   Q: 527  QAFKLLE-ELKDHDAPVTSVRMLS-GERVLTASHDGTVKMWDVRTDTCVATVGR-CQSAVLCMEYDDSTGILAAAGRDVVAHVWDIRSSKQMFK 617
           ******9.**************99.99*************************66.99************************************* PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlg 283
           l+ght++++s+r++  +e +++gs+D + r+W l+ g++  +l+ h+  v +v + s++d+ +++g
   Q: 618  LQGHTKWIRSMRMT--GETIITGSDDWTARVWSLTRGTCDAVLACHAGPVLCVEY-SPSDKGIITG 680
           **************..**************************************9.9999999987 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MGPEEEAAPQ IMQFIETQGF LDYLERCNNA EEFTNNLLDK LQDATGRGQS PLAIFPSHVA 60
DPEIITIADS EIEGSEPGNR HCYKSFPANA RTEEQEEKRK SILALVGGAS KQVPSSPAVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCCTG AAGAAGAAGC AGCACCGTGA GTATAGAAGG GGATCGGCAA GGGGGTCTGC 60
GGCCCCCGCC ATTGTTGCTG CTCCTCGCAT GGTGGCAGCC GCCATTGTGC TGTTCCTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	70.37	0.00e+00	1083.00
IUUC-Aly-005508	Arabidopsis lyrata	68.94	0.00e+00	1049.00
IUUC-Ath-007614	Arabidopsis thaliana	68.60	0.00e+00	1063.00
IUUC-Bdi-014863	Brachypodium distachyon	94.54	0.00e+00	1505.00
IUUC-Bol-015997	Brassica oleracea	68.22	0.00e+00	1052.00
IUUC-Bra-017065	Brassica rapa	68.22	0.00e+00	1052.00
IUUC-Cre-022837	Chlamydomonas reinhardtii	30.23	3.00e-24	105.00
IUUC-Gma-042682	Glycine max	69.88	0.00e+00	1101.00
IUUC-Hvu-047377	Hordeum vulgare	94.29	7.00e-175	605.00
IUUC-Lpe-051109	Leersia perrieri	91.13	0.00e+00	1374.00
IUUC-Mtr-058651	Medicago truncatula	69.23	0.00e+00	1088.00
IUUC-Mac-065420	Musa acuminata	75.88	0.00e+00	1237.00
IUUC-Oba-075961	Oryza barthii	88.40	0.00e+00	1381.00
IUUC-Obr-076806	Oryza brachyantha	90.10	0.00e+00	1439.00
IUUC-Ogu-078716	Oryza glumaepatula	88.53	0.00e+00	1384.00
IUUC-Oin-079809	Oryza indica	82.24	0.00e+00	1268.00
IUUC-Olo-080386	Oryza longistaminata	85.19	0.00e+00	1380.00
IUUC-Ome-081107	Oryza meridionalis	88.79	0.00e+00	1411.00
IUUC-Oni-082213	Oryza nivara	85.30	0.00e+00	1333.00
IUUC-Opu-083850	Oryza punctata	89.59	0.00e+00	1300.00
IUUC-Oru-084982	Oryza rufipogon	89.99	0.00e+00	1343.00
IUUC-Osa-086141	Oryza sativa	90.11	0.00e+00	1439.00
IUUC-Ppa-095259	Physcomitrella patens	49.75	0.00e+00	749.00
IUUC-Pop-099233	Populus trichocarpa	72.43	0.00e+00	1141.00
IUUC-Ppe-101883	Prunus persica	68.82	0.00e+00	809.00
IUUC-Smo-109523	Selaginella moellendorffii	55.83	0.00e+00	806.00
IUUC-Sit-109736	Setaria italica	88.96	0.00e+00	1431.00
IUUC-Sly-111483	Solanum lycopersicum	71.05	0.00e+00	1092.00
IUUC-Sbi-113820	Sorghum bicolor	89.59	0.00e+00	1441.00
IUUC-Sre-114916	Sporisorium reilianum	26.55	6.00e-19	89.00
IUUC-Tca-121657	Theobroma cacao	72.65	0.00e+00	1134.00
IUUC-Tae-124598	Triticum aestivum	96.00	0.00e+00	1540.00
IUUC-Vvi-131550	Vitis vinifera	70.91	0.00e+00	1119.00
IUUC-Yli-134429	Yarrowia lipolytica	32.39	5.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence