iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058339

Ensembl Protein ID

KEH38924

UniProt Accession

A0A072VA81; A0A072VA81_MEDTR

Genbank Protein ID

KEH38924.1

Protein Name

DNA-binding and zinc-finger protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g084620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g084620	KEH38924	KEH38924
MTR_2g084620	KEH38925	KEH38925

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.40e-09	36.8	1263	1312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC++C+++++++ + + Ce C++w+H++ l+l+ e++  +   + C +Cr+
   Q: 1263 VCHLCHKPYRSDLMYIGCESCTRWYHAEALELE-ESKIFSMLGFKCCRCRK 1312
           8*********999********************.888888878******85 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MKLPRKSKST EPPPPPMAPP SGDPPSEPPK RRGRPRKQRR KEKETVTVEL KKPIVLIGRY 60
VLKEFSERVD QIGKVLSYKI GLYRVDYENG DFEDLDSSAI RRILIEDCDF DDDLIRRKNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAAACCCT AACAATTTTC ACTGAACCTC CGCAATTAGA AACCCTAACT CTCTTCATCT 60
TCAATGAAGC TTCCGCGAAA ATCCAAATCA ACCGAACCAC CACCACCACC GATGGCGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_2g084620

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	34.88	1.00e-117	417.00
IUUC-Atr-002497	Amborella trichopoda	35.98	3.00e-109	390.00
IUUC-Aly-006239	Arabidopsis lyrata	42.63	0.00e+00	975.00
IUUC-Ath-007124	Arabidopsis thaliana	43.71	0.00e+00	1004.00
IUUC-Bol-016146	Brassica oleracea	42.09	0.00e+00	1026.00
IUUC-Bra-017694	Brassica rapa	42.50	0.00e+00	1016.00
IUUC-Gma-043978	Glycine max	63.20	0.00e+00	1652.00
IUUC-Mac-065252	Musa acuminata	42.76	3.00e-147	516.00
IUUC-Oba-075125	Oryza barthii	35.36	4.00e-115	409.00
IUUC-Obr-076575	Oryza brachyantha	35.40	3.00e-106	380.00
IUUC-Ogl-077936	Oryza glaberrima	35.32	2.00e-115	410.00
IUUC-Ogu-078676	Oryza glumaepatula	35.81	2.00e-116	414.00
IUUC-Sbi-114633	Sorghum bicolor	35.23	7.00e-105	375.00
IUUC-Tca-121553	Theobroma cacao	46.94	0.00e+00	665.00
IUUC-Tae-125366	Triticum aestivum	29.98	2.00e-104	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence