iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080767

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN541690.1_FG003	KN541690.1_FGT003	KN541690.1_FGP003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	2.50e-06	28.2	16	58

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 94   peegpdaglldrlpeeilveilklldkeellraarvcrrwq.e 135
           p   +    +++lp ++lv i++ l+ +++ +   vcr w+  
   Q: 16   PSSSTSGVDWSQLPADLLVCIFGVLEVPDIFSSGVVCRAWHaS 58
           55556667899*****************************944 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MEEAAVTGEL LEQEAPSSST SGVDWSQLPA DLLVCIFGVL EVPDIFSSGV VCRAWHASFL 60
EARRLGICSS YPGPCLVFSS SDRDPSVATL HSLTTGKDYY VTMPDPPFRT RYIVGSSHGW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGG CTGCTGTTAC AGGGGAATTG TTGGAGCAAG AAGCTCCATC TTCTTCAACC 60
TCCGGTGTCG ATTGGTCCCA GCTTCCGGCG GACTTGCTCG TCTGCATCTT CGGCGTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003453	Anas platyrhynchos	35.90	1.00e-04	40.00
IUUC-Bra-016778	Brassica rapa	28.57	1.00e-09	56.60
IUUC-Cne-026948	Cryptococcus neoformans	41.94	1.40e-01	29.60
IUUC-Ete-032234	Echinops telfairi	34.55	5.00e-05	41.20
IUUC-Opr-071046	Ochotona princeps	37.84	6.00e-04	38.10
IUUC-Oba-075957	Oryza barthii	35.69	4.00e-31	128.00
IUUC-Ogl-077596	Oryza glaberrima	31.58	2.00e-04	36.60
IUUC-Ogu-078332	Oryza glumaepatula	36.66	6.00e-68	252.00
IUUC-Oin-079470	Oryza indica	31.58	2.00e-04	36.60
IUUC-Oni-082392	Oryza nivara	36.52	2.00e-79	289.00
IUUC-Opu-083705	Oryza punctata	31.42	2.00e-63	236.00
IUUC-Oru-084450	Oryza rufipogon	32.29	4.00e-67	249.00
IUUC-Pfo-097279	Poecilia formosa	40.00	8.00e-05	40.80
IUUC-Sit-110207	Setaria italica	27.16	2.00e-16	79.30
IUUC-Tae-123134	Triticum aestivum	30.59	5.00e-54	205.00
IUUC-Tur-126472	Triticum urartu	34.70	9.00e-61	227.00
IUUC-Vvi-131582	Vitis vinifera	31.08	3.00e-03	36.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence