iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003157

Ensembl Protein ID

ERM99593

UniProt Accession

W1NW90; W1NW90_AMBTC

Genbank Protein ID

ERM99593.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI394998

Gene Name

AMTR_s00088p00141580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00088p00141580	ERM99593	ERM99593

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.00e-21	76.3	23	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
            p+eflCpIs+ +M dPv+++sG+t++r++Ie + ++ g    +t+++l+ + l+Pnl+l+  i++wc+e
   Q: 23   WPSEFLCPISMAPMADPVIVSSGQTFERRCIEAY-KEMGA-MAMTSTQLDVSALIPNLALKTAISNWCDE 90
           599******************************9.55555.8**************************97 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MGSRKARWTI SLRFRPLKFG RQWPSEFLCP ISMAPMADPV IVSSGQTFER RCIEAYKEMG 60
AMAMTSTQLD VSALIPNLAL KTAISNWCDE WGLKKPSTPD PKTSKELVQA FVALQRSPKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTAGCA GGAAAGCAAG GTGGACGATC TCTCTGAGGT TTCGGCCATT GAAGTTTGGG 60
CGACAATGGC CATCGGAGTT CCTGTGCCCT ATCTCCATGG CTCCAATGGC TGACCCAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18427628

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005518	Arabidopsis lyrata	44.11	1.00e-63	236.00
IUUC-Ath-006703	Arabidopsis thaliana	44.38	7.00e-69	253.00
IUUC-Bdi-014649	Brachypodium distachyon	41.48	2.00e-49	189.00
IUUC-Bol-015923	Brassica oleracea	43.72	3.00e-62	231.00
IUUC-Bra-016715	Brassica rapa	41.58	4.00e-59	221.00
IUUC-Gma-043729	Glycine max	45.67	4.00e-76	277.00
IUUC-Lpe-050893	Leersia perrieri	42.48	3.00e-44	171.00
IUUC-Mtr-057660	Medicago truncatula	46.83	3.00e-61	228.00
IUUC-Mac-064560	Musa acuminata	44.22	1.00e-49	189.00
IUUC-Oba-075532	Oryza barthii	39.61	2.00e-39	156.00
IUUC-Ogl-077033	Oryza glaberrima	43.29	1.00e-40	159.00
IUUC-Ogu-078087	Oryza glumaepatula	43.29	1.00e-40	159.00
IUUC-Oin-079818	Oryza indica	40.93	1.00e-37	149.00
IUUC-Ome-081313	Oryza meridionalis	43.29	1.00e-40	159.00
IUUC-Oni-082747	Oryza nivara	43.29	2.00e-40	159.00
IUUC-Opu-084021	Oryza punctata	43.96	1.00e-43	169.00
IUUC-Oru-084445	Oryza rufipogon	43.29	3.00e-40	159.00
IUUC-Osa-085410	Oryza sativa	43.29	7.00e-41	160.00
IUUC-Ppa-095595	Physcomitrella patens	32.38	2.00e-60	226.00
IUUC-Pop-099467	Populus trichocarpa	45.54	2.00e-73	268.00
IUUC-Ppe-101245	Prunus persica	47.51	2.00e-74	272.00
IUUC-Smo-109005	Selaginella moellendorffii	36.63	3.00e-41	162.00
IUUC-Sit-110079	Setaria italica	43.21	2.00e-45	176.00
IUUC-Sly-111131	Solanum lycopersicum	46.90	6.00e-65	240.00
IUUC-Stu-112864	Solanum tuberosum	48.19	6.00e-62	230.00
IUUC-Sbi-114055	Sorghum bicolor	41.30	3.00e-37	148.00
IUUC-Tca-121304	Theobroma cacao	47.51	3.00e-74	271.00
IUUC-Tae-123306	Triticum aestivum	45.12	5.00e-52	197.00
IUUC-Vvi-131041	Vitis vinifera	49.73	2.00e-70	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence