iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111131

Ensembl Protein ID

Solyc02g087200.1.1

UniProt Accession

K4BBM7; K4BBM7_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g087200.1	Solyc02g087200.1.1	Solyc02g087200.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-15	57.9	22	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           +p ef+CpIs+ lM dPv+++sG+t++r +++ + + + +    +++  + ++++Pnl+l+++i ++c +
   Q: 22   IPIEFVCPISGSLMADPVIVSSGHTFERHCVHACKSLSFTPVLPDGSVPDFSTVIPNLALKSTILNFCRS 91
           89********************************87777744445555566777**************86 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGTSKQRWRI SFHKSPSKQP PIPIEFVCPI SGSLMADPVI VSSGHTFERH CVHACKSLSF 60
TPVLPDGSVP DFSTVIPNLA LKSTILNFCR SSFLDPPKPI NFLTAENLVF TLKATRKPQD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTACTA GCAAGCAAAG ATGGAGAATT TCATTTCACA AGTCTCCATC AAAACAACCT 60
CCTATTCCTA TAGAATTTGT CTGTCCTATT TCTGGTTCTC TCATGGCTGA CCCTGTAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101243948

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	45.29	2.00e-65	243.00
IUUC-Aly-005518	Arabidopsis lyrata	55.60	5.00e-136	477.00
IUUC-Ath-006703	Arabidopsis thaliana	57.64	2.00e-145	508.00
IUUC-Bdi-014649	Brachypodium distachyon	37.76	2.00e-74	272.00
IUUC-Bol-015923	Brassica oleracea	56.88	4.00e-128	451.00
IUUC-Bra-016715	Brassica rapa	55.32	4.00e-116	410.00
IUUC-Gma-043729	Glycine max	55.98	2.00e-136	478.00
IUUC-Hvu-047842	Hordeum vulgare	38.36	2.00e-19	89.40
IUUC-Lpe-050893	Leersia perrieri	38.83	1.00e-61	229.00
IUUC-Mac-064560	Musa acuminata	38.82	7.00e-69	253.00
IUUC-Oba-075532	Oryza barthii	43.77	1.00e-38	154.00
IUUC-Ogl-077033	Oryza glaberrima	35.38	2.00e-51	196.00
IUUC-Ogu-078801	Oryza glumaepatula	43.42	1.00e-38	153.00
IUUC-Oin-079760	Oryza indica	37.06	8.00e-48	184.00
IUUC-Ome-081313	Oryza meridionalis	33.99	5.00e-52	197.00
IUUC-Oni-082747	Oryza nivara	34.56	1.00e-52	199.00
IUUC-Opu-084021	Oryza punctata	36.70	5.00e-56	211.00
IUUC-Oru-084445	Oryza rufipogon	34.58	1.00e-51	197.00
IUUC-Osa-085410	Oryza sativa	34.56	1.00e-52	199.00
IUUC-Ppa-095595	Physcomitrella patens	42.41	1.00e-50	194.00
IUUC-Pop-098866	Populus trichocarpa	56.12	3.00e-133	468.00
IUUC-Ppe-101810	Prunus persica	59.87	2.00e-143	501.00
IUUC-Smo-109005	Selaginella moellendorffii	32.99	2.00e-49	189.00
IUUC-Sit-109782	Setaria italica	35.59	1.00e-58	220.00
IUUC-Stu-112864	Solanum tuberosum	94.86	0.00e+00	860.00
IUUC-Sar-113307	Sorex araneus	33.71	6.00e-07	48.90
IUUC-Sbi-114055	Sorghum bicolor	49.38	1.00e-36	147.00
IUUC-Tca-121304	Theobroma cacao	58.40	4.00e-147	513.00
IUUC-Tae-124240	Triticum aestivum	38.22	7.00e-78	283.00
IUUC-Vvi-131041	Vitis vinifera	59.92	4.00e-149	520.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence