iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014110

Ensembl Protein ID

BRADI4G13950.1

UniProt Accession

I1IKG4; I1IKG4_BRADI

Genbank Protein ID

KQJ87857.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100839035; BRADI_4g13950

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G13950	BRADI4G13950.1	BRADI4G13950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-06	26.4	155	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDl 30
           ++f  +  +l++G+ Dg ++v+ +
   Q: 155  VSFsGEgSILATGGEDGHLRVFKW 178
           5565334689***********986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAPRGGGQTY GFPIYCASWL PLAHILKPSP SAEDSADADA ASSSSSPPPM VALGGGGGEG 60
RSGVPNALVV AALDPAAATP ALSPEPVFRL GTEDQVPYRM TVHPRGDGVL CAFPKGCRLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCCC GCGGCGGCGG CCAGACCTAC GGCTTCCCCA TCTACTGCGC CTCCTGGCTG 60
CCCCTCGCGC ACATCCTCAA GCCCTCCCCC TCCGCCGAGG ACTCCGCGGA CGCGGACGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

bdi:100839035

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	28.64	1.00e-16	80.50
IUUC-Aly-005479	Arabidopsis lyrata	46.58	6.00e-74	270.00
IUUC-Ath-007466	Arabidopsis thaliana	46.46	1.00e-70	259.00
IUUC-Bta-012386	Bos taurus	30.88	5.00e-19	87.80
IUUC-Bra-016660	Brassica rapa	44.29	8.00e-72	263.00
IUUC-Cja-018998	Callithrix jacchus	27.03	7.00e-21	94.40
IUUC-Cfa-020666	Canis familiaris	29.90	8.00e-20	90.50
IUUC-Cpo-022030	Cavia porcellus	27.84	7.00e-21	94.40
IUUC-Csa-023521	Chlorocebus sabaeus	31.00	2.00e-18	86.30
IUUC-Cin-025431	Ciona intestinalis	28.25	3.00e-17	82.00
IUUC-Dre-027832	Danio rerio	24.14	6.00e-15	74.30
IUUC-Dno-028989	Dasypus novemcinctus	26.64	6.00e-19	87.80
IUUC-Dme-031901	Drosophila melanogaster	28.24	6.00e-19	87.80
IUUC-Ete-032290	Echinops telfairi	31.37	4.00e-17	82.00
IUUC-Eca-033917	Equus caballus	30.39	2.00e-19	89.00
IUUC-Fca-036323	Felis catus	30.39	1.00e-19	90.10
IUUC-Gmo-038693	Gadus morhua	26.61	1.00e-15	77.00
IUUC-Gga-040702	Gallus gallus	28.22	2.00e-19	89.40
IUUC-Gac-042635	Gasterosteus aculeatus	27.34	3.00e-14	72.00
IUUC-Gma-043946	Glycine max	43.87	6.00e-73	266.00
IUUC-Ggo-044648	Gorilla gorilla	30.65	2.00e-19	89.70
IUUC-Hsa-046003	Homo sapiens	30.65	1.00e-19	89.70
IUUC-Itr-048613	Ictidomys tridecemlineatus	30.39	2.00e-18	86.30
IUUC-Lch-049473	Latimeria chalumnae	28.06	9.00e-21	94.00
IUUC-Lpe-051586	Leersia perrieri	77.78	2.00e-160	557.00
IUUC-Loc-052177	Lepisosteus oculatus	28.57	3.00e-23	102.00
IUUC-Laf-054366	Loxodonta africana	29.90	8.00e-19	87.40
IUUC-Mcc-055775	Macaca mulatta	31.16	8.00e-20	90.50
IUUC-Meu-056562	Macropus eugenii	25.59	1.00e-10	60.50
IUUC-Mtr-058661	Medicago truncatula	46.18	1.00e-77	282.00
IUUC-Mla-058865	Melampsora laricipopulina	26.54	4.00e-09	55.10
IUUC-Mvi-060443	Microbotryum violaceum	33.04	4.00e-11	62.40
IUUC-Mmr-061126	Microcebus murinus	30.65	7.00e-20	90.90
IUUC-Mdo-062928	Monodelphis domestica	27.27	2.00e-15	76.30
IUUC-Mmu-064083	Mus musculus	28.19	2.00e-19	89.40
IUUC-Mac-064955	Musa acuminata	56.32	6.00e-112	396.00
IUUC-Mpu-066857	Mustela putorius furo	26.79	6.00e-20	90.90
IUUC-Mlu-067891	Myotis lucifugus	27.18	2.00e-18	85.90
IUUC-Nle-070030	Nomascus leucogenys	30.81	6.00e-19	87.80
IUUC-Opr-070864	Ochotona princeps	28.43	1.00e-17	83.60
IUUC-Ont-072204	Oreochromis niloticus	27.39	1.00e-15	76.60
IUUC-Oan-073643	Ornithorhynchus anatinus	27.52	4.00e-15	74.30
IUUC-Ocu-074217	Oryctolagus cuniculus	28.92	3.00e-17	82.40
IUUC-Oba-075587	Oryza barthii	73.26	2.00e-148	517.00
IUUC-Obr-076826	Oryza brachyantha	79.35	1.00e-168	585.00
IUUC-Ogl-077927	Oryza glaberrima	80.85	3.00e-144	503.00
IUUC-Ogu-078241	Oryza glumaepatula	77.44	1.00e-154	538.00
IUUC-Oin-080217	Oryza indica	74.06	1.00e-153	535.00
IUUC-Olo-081060	Oryza longistaminata	83.39	7.00e-126	442.00
IUUC-Ome-082007	Oryza meridionalis	75.69	9.00e-162	561.00
IUUC-Oni-082827	Oryza nivara	74.06	1.00e-153	535.00
IUUC-Opu-083159	Oryza punctata	77.39	1.00e-164	571.00
IUUC-Oru-085039	Oryza rufipogon	74.06	1.00e-153	535.00
IUUC-Osa-086258	Oryza sativa	74.06	1.00e-153	535.00
IUUC-Ola-087223	Oryzias latipes	26.09	2.00e-15	76.30
IUUC-Oga-088417	Otolemur garnettii	27.94	3.00e-17	82.00
IUUC-Oar-090435	Ovis aries	30.88	3.00e-19	88.60
IUUC-Ptr-090869	Pan troglodytes	30.65	1.00e-13	70.10
IUUC-Pan-092527	Papio anubis	31.00	2.00e-18	86.30
IUUC-Pma-094156	Petromyzon marinus	28.19	6.00e-18	84.30
IUUC-Ppa-095904	Physcomitrella patens	39.50	8.00e-48	183.00
IUUC-Pfo-097488	Poecilia formosa	25.88	2.00e-14	72.40
IUUC-Pab-097720	Pongo abelii	30.65	2.00e-19	89.70
IUUC-Pop-099618	Populus trichocarpa	47.14	1.00e-83	302.00
IUUC-Pca-100288	Procavia capensis	28.65	2.00e-15	75.90
IUUC-Ppe-101864	Prunus persica	46.27	2.00e-72	265.00
IUUC-Pva-103192	Pteropus vampyrus	30.80	1.00e-20	93.60
IUUC-Ptt-103883	Puccinia triticina	31.87	1.00e-09	56.60
IUUC-Rno-106123	Rattus norvegicus	28.92	2.00e-19	89.40
IUUC-Sha-107169	Sarcophilus harrisii	26.83	1.00e-15	77.00
IUUC-Smo-109265	Selaginella moellendorffii	42.66	1.00e-55	209.00
IUUC-Sly-111551	Solanum lycopersicum	49.45	1.00e-74	272.00
IUUC-Stu-112264	Solanum tuberosum	49.45	7.00e-74	270.00
IUUC-Sar-113218	Sorex araneus	28.49	3.00e-13	67.80
IUUC-Sre-115183	Sporisorium reilianum	35.16	3.00e-10	59.30
IUUC-Ssc-115282	Sus scrofa	27.69	5.00e-19	88.20
IUUC-Tru-117866	Takifugu rubripes	28.26	7.00e-17	80.90
IUUC-Tca-121083	Theobroma cacao	46.88	3.00e-91	327.00
IUUC-Tae-124218	Triticum aestivum	86.05	3.00e-155	540.00
IUUC-Ttr-128585	Tursiops truncatus	30.88	2.00e-19	89.40
IUUC-Uma-129598	Ustilago maydis	34.07	4.00e-10	58.50
IUUC-Vvi-131024	Vitis vinifera	47.53	2.00e-88	318.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence