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Tag Content
iUUCD ID IUUC-Ola-086540
Ensembl Protein ID ENSORLP00000007072.2
UniProt Accession H2LM02; H2LM02_ORYLA
Genbank Protein ID ENSORLP00000007072
Protein Name Uncharacterized protein
Genbank Nucleotide ID BAAF04001252
Gene Name rad23b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000005624.2 ENSORLT00000007073.2 ENSORLP00000007072.2
ENSORLG00000005624.2 ENSORLT00000007068.1 ENSORLP00000007067.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/UBA 2.20e-19 69.2 185 222
ULD/UDP/UBQ/UBQ_PIM 6.40e-25 87.2 1 76
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA
   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLldg 41
             ++++++ MG++re+++ aLra++nn+++AveyLl+g
   Q: 185  DTMVNEMMLMGYEREQVVAALRASYNNPDRAVEYLLSG 222
           679*********************************87 PP
   

   ULD/UDP/UBQ/UBQ_PIM
   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m +t+ktl++++f+++++e++tv+ lKe+i++e+g   + ++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k
   Q: 1    MLITLKTLQQQTFKIDIDEEETVKTLKERIEQEKGkesFSVAGQKLIYAGKILSDDTALKEYKIDEKNFVVVMVTK 76
           789********************************99999*********************************997 PP
   
Organism Oryzias latipes
Protein Sequence
(Fasta)
MLITLKTLQQ QTFKIDIDEE ETVKTLKERI EQEKGKESFS VAGQKLIYAG KILSDDTALK 60
EYKIDEKNFV VVMVTKVGEL QTAGELQACL EPLYPSPKTA APSPKSSSAS SSAPSSAPSS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ola-086540|UBD,UBA;ULD,UBQ_PIM|Oryzias latipes
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAAAAATCAT GGCGGCTGAC AGTTTGTAAT GAGCCAACGG AAAAAAGCGA TTTCTTTCAA 60
GTTAGATTTA CAGATTTTTT TAAAATTGGA GCCAGAAGTA AACCGACCTA CAACATGCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ola-086540|UBD,UBA;ULD,UBQ_PIM|Oryzias latipes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd
PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2
Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding
PRINTS

PR01839--RAD23PROTEIN
SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ
Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000770 Aegilops tauschii 35.25 5.00e-31 128.00
IUUC-Aml-001195 Ailuropoda melanoleuca 65.59 9.00e-63 233.00
IUUC-Atr-003116 Amborella trichopoda 34.81 1.00e-27 117.00
IUUC-Apl-003371 Anas platyrhynchos 63.01 1.00e-64 239.00
IUUC-Aca-004599 Anolis carolinensis 67.20 1.00e-62 233.00
IUUC-Aly-006159 Arabidopsis lyrata 36.86 9.00e-38 150.00
IUUC-Ath-006674 Arabidopsis thaliana 36.74 3.00e-37 149.00
IUUC-Acl-008212 Aspergillus clavatus 32.72 6.00e-25 108.00
IUUC-Afl-008605 Aspergillus flavus 40.25 6.00e-18 85.10
IUUC-Afu-008877 Aspergillus fumigatus 39.73 6.00e-17 81.60
IUUC-Ani-009460 Aspergillus nidulans 38.61 1.00e-31 130.00
IUUC-Aor-010032 Aspergillus oryzae 40.25 5.00e-18 85.10
IUUC-Ate-010458 Aspergillus terreus 35.71 4.00e-25 108.00
IUUC-Ame-011107 Astyanax mexicanus 61.74 2.00e-31 129.00
IUUC-Bgr-012056 Blumeria graminis 34.94 5.00e-20 91.70
IUUC-Bta-012922 Bos taurus 64.37 6.00e-65 241.00
IUUC-Bci-013933 Botrytis cinerea 42.47 1.00e-17 84.00
IUUC-Bdi-014355 Brachypodium distachyon 35.66 5.00e-34 138.00
IUUC-Bol-015272 Brassica oleracea 36.95 2.00e-37 149.00
IUUC-Bra-016970 Brassica rapa 35.63 5.00e-37 148.00
IUUC-Cel-018364 Caenorhabditis elegans 39.84 7.00e-17 80.90
IUUC-Cja-018772 Callithrix jacchus 61.94 2.00e-63 236.00
IUUC-Cfa-020683 Canis familiaris 62.20 2.00e-62 232.00
IUUC-Cpo-022145 Cavia porcellus 59.92 6.00e-62 231.00
IUUC-Cre-022810 Chlamydomonas reinhardtii 35.09 2.00e-26 112.00
IUUC-Csa-023714 Chlorocebus sabaeus 63.31 1.00e-63 236.00
IUUC-Cho-024814 Choloepus hoffmanni 59.32 2.00e-55 209.00
IUUC-Cin-025741 Ciona intestinalis 37.19 5.00e-34 138.00
IUUC-Cne-027056 Cryptococcus neoformans 44.59 5.00e-13 68.60
IUUC-Cme-027260 Cyanidioschyzon merolae 27.46 3.00e-18 86.30
IUUC-Dre-028369 Danio rerio 59.84 2.00e-71 262.00
IUUC-Dno-029543 Dasypus novemcinctus 62.90 5.00e-64 238.00
IUUC-Dor-030358 Dipodomys ordii 59.50 2.00e-61 229.00
IUUC-Dme-032027 Drosophila melanogaster 44.00 2.00e-43 169.00
IUUC-Ete-032583 Echinops telfairi 59.52 2.00e-44 173.00
IUUC-Eca-034243 Equus caballus 63.97 9.00e-65 240.00
IUUC-Eeu-034721 Erinaceus europaeus 61.36 2.00e-46 179.00
IUUC-Fca-035679 Felis catus 64.78 3.00e-65 242.00
IUUC-Fal-037148 Ficedula albicollis 62.20 3.00e-64 238.00
IUUC-Gmo-038751 Gadus morhua 62.98 8.00e-68 249.00
IUUC-Ggr-040116 Gaeumannomyces graminis 41.61 1.00e-15 77.00
IUUC-Gga-040544 Gallus gallus 61.79 3.00e-64 238.00
IUUC-Gac-042239 Gasterosteus aculeatus 77.64 4.00e-84 304.00
IUUC-Gma-044045 Glycine max 38.11 4.00e-36 145.00
IUUC-Ggo-045125 Gorilla gorilla 63.31 2.00e-63 236.00
IUUC-Hsa-046519 Homo sapiens 63.31 2.00e-63 236.00
IUUC-Hvu-047832 Hordeum vulgare 33.46 2.00e-31 129.00
IUUC-Itr-048295 Ictidomys tridecemlineatus 62.35 2.00e-61 229.00
IUUC-Kpa-049314 Komagataella pastoris 33.47 2.00e-26 112.00
IUUC-Lch-050553 Latimeria chalumnae 63.82 4.00e-56 211.00
IUUC-Lpe-051168 Leersia perrieri 36.59 1.00e-36 146.00
IUUC-Loc-051748 Lepisosteus oculatus 59.92 3.00e-64 238.00
IUUC-Laf-054293 Loxodonta africana 63.31 2.00e-63 235.00
IUUC-Mcc-055600 Macaca mulatta 63.31 3.00e-63 234.00
IUUC-Meu-056459 Macropus eugenii 58.80 3.00e-64 238.00
IUUC-Mpo-057609 Magnaporthe poae 40.97 3.00e-15 75.50
IUUC-Mtr-058239 Medicago truncatula 29.40 2.00e-40 159.00
IUUC-Mla-058961 Melampsora laricipopulina 40.14 3.00e-20 92.40
IUUC-Mvi-060220 Microbotryum violaceum 42.76 5.00e-19 89.00
IUUC-Mmr-061159 Microcebus murinus 63.71 1.00e-63 236.00
IUUC-Mdo-061967 Monodelphis domestica 62.50 1.00e-62 233.00
IUUC-Mmu-063258 Mus musculus 64.06 7.00e-65 240.00
IUUC-Mac-065180 Musa acuminata 36.82 1.00e-35 143.00
IUUC-Mpu-066389 Mustela putorius furo 62.20 2.00e-62 233.00
IUUC-Mlu-067999 Myotis lucifugus 64.78 6.00e-64 237.00
IUUC-Nfi-068390 Neosartorya fischeri 39.73 6.00e-17 81.60
IUUC-Ncr-068685 Neurospora crassa 38.93 1.00e-18 87.00
IUUC-Nle-069655 Nomascus leucogenys 63.31 1.00e-63 236.00
IUUC-Ont-072484 Oreochromis niloticus 66.43 5.00e-123 434.00
IUUC-Oan-073572 Ornithorhynchus anatinus 58.00 6.00e-59 221.00
IUUC-Ocu-074831 Oryctolagus cuniculus 61.94 2.00e-61 229.00
IUUC-Oba-074972 Oryza barthii 36.18 2.00e-36 145.00
IUUC-Obr-076909 Oryza brachyantha 37.35 6.00e-36 144.00
IUUC-Ogu-078883 Oryza glumaepatula 32.85 3.00e-32 132.00
IUUC-Olo-080559 Oryza longistaminata 35.36 1.00e-36 146.00
IUUC-Ome-081866 Oryza meridionalis 32.85 3.00e-32 132.00
IUUC-Oni-082812 Oryza nivara 36.99 3.00e-37 148.00
IUUC-Opu-083963 Oryza punctata 36.59 6.00e-37 147.00
IUUC-Oru-084942 Oryza rufipogon 36.99 6.00e-37 147.00
IUUC-Olu-087843 Ostreococcus lucimarinus 38.40 5.00e-37 148.00
IUUC-Oga-088023 Otolemur garnettii 63.14 6.00e-64 237.00
IUUC-Oar-089964 Ovis aries 63.56 2.00e-64 239.00
IUUC-Ptr-091165 Pan troglodytes 63.31 3.00e-63 235.00
IUUC-Pan-092009 Papio anubis 62.55 4.00e-62 231.00
IUUC-Psi-093477 Pelodiscus sinensis 63.10 4.00e-55 208.00
IUUC-Ppa-095654 Physcomitrella patens 35.25 8.00e-34 137.00
IUUC-Pfo-097385 Poecilia formosa 64.07 9.00e-115 406.00
IUUC-Pab-097868 Pongo abelii 63.31 5.00e-63 234.00
IUUC-Pop-100054 Populus trichocarpa 37.45 9.00e-35 140.00
IUUC-Ppe-101830 Prunus persica 36.54 2.00e-34 140.00
IUUC-Pva-102137 Pteropus vampyrus 63.97 3.00e-65 241.00
IUUC-Pgr-103618 Puccinia graminis 58.18 4.00e-15 75.50
IUUC-Ptt-103717 Puccinia triticina 42.18 2.00e-22 99.80
IUUC-Pte-104303 Pyrenophora teres 42.95 1.00e-17 84.00
IUUC-Pyt-104580 Pyrenophora triticirepentis 42.95 2.00e-17 83.60
IUUC-Rno-104844 Rattus norvegicus 64.45 3.00e-65 242.00
IUUC-Sha-107073 Sarcophilus harrisii 62.50 1.00e-62 233.00
IUUC-Sja-107851 Schizosaccharomyces japonicus 35.47 1.00e-35 144.00
IUUC-Spo-108298 Schizosaccharomyces pombe 35.88 1.00e-34 140.00
IUUC-Ssl-108382 Sclerotinia sclerotiorum 38.71 2.00e-15 76.30
IUUC-Smo-109129 Selaginella moellendorffii 34.56 1.00e-28 120.00
IUUC-Sit-109813 Setaria italica 34.87 8.00e-36 144.00
IUUC-Sly-111480 Solanum lycopersicum 37.16 7.00e-41 160.00
IUUC-Stu-112054 Solanum tuberosum 36.50 5.00e-37 148.00
IUUC-Sar-112925 Sorex araneus 64.83 3.00e-60 225.00
IUUC-Sbi-114459 Sorghum bicolor 34.10 7.00e-35 140.00
IUUC-Ssc-116329 Sus scrofa 63.97 4.00e-65 241.00
IUUC-Tgu-116918 Taeniopygia guttata 62.20 4.00e-64 238.00
IUUC-Tru-118651 Takifugu rubripes 68.42 3.00e-82 298.00
IUUC-Tsy-118836 Tarsius syrichta 70.27 9.00e-39 154.00
IUUC-Tni-120486 Tetraodon nigroviridis 59.76 1.00e-65 243.00
IUUC-Tca-121661 Theobroma cacao 36.36 3.00e-33 135.00
IUUC-Tre-121911 Trichoderma reesei 37.26 2.00e-27 116.00
IUUC-Tvi-122617 Trichoderma virens 34.70 5.00e-26 111.00
IUUC-Tae-125346 Triticum aestivum 34.72 1.00e-35 143.00
IUUC-Tur-126610 Triticum urartu 35.25 1.00e-31 130.00
IUUC-Tme-127092 Tuber melanosporum 41.40 2.00e-18 86.70
IUUC-Tbe-127493 Tupaia belangeri 71.33 3.00e-40 159.00
IUUC-Ttr-128464 Tursiops truncatus 64.37 7.00e-65 241.00
IUUC-Vda-129946 Verticillium dahliae 42.28 2.00e-17 83.60
IUUC-Vpa-130357 Vicugna pacos 56.94 2.00e-38 152.00
IUUC-Vvi-131039 Vitis vinifera 33.58 3.00e-37 149.00
IUUC-Xtr-132679 Xenopus tropicalis 66.67 3.00e-51 195.00
IUUC-Xma-133503 Xiphophorus maculatus 72.58 7.00e-82 297.00
IUUC-Yli-134615 Yarrowia lipolytica 37.89 3.00e-36 145.00
Created Date 25-Jun-2017

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