iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121272

Ensembl Protein ID

EOY13117

UniProt Accession

A0A061F8U4; A0A061F8U4_THECC

Genbank Protein ID

EOY13117.1

Protein Name

RING/U-box superfamily protein, putative isoform 1

Genbank Nucleotide ID

CM001885

Gene Name

TCM_031645

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_031645	EOY13118	EOY13118
TCM_031645	EOY13117	EOY13117

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	58.09	6.00e-77	284.00	IUUC-Ath-007424
E3 activity/RING/RING	27.59	7.00e-06	48.90	IUUC-Hsa-046704
E3 activity/RING/RING	28.12	5.00e-04	39.70	IUUC-Sce-106198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASTSASLSD GVSGRIRRAS PNLFSENQAL VTDIRKALNL MKEIAVDLER DNQSEMVKQL 60
EEAVAELVEA HENCLHHSSA IQSVGEAYEP GTELTDFKKL LDSEFEKVKA SSSSSPQNHP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCCCTCCA AATCAATGGT CCAAAAAATC AAAAACCAGT ACTTTCGGCG AAAAAACCCG 60
TAATAAAACC CGACCCGACC AAATACCTAA ATGGCGTCGA CGTCGGCATC TCTCTCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11789--zf-Nse

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0060250--P:germ-line stem-cell niche homeostasis
GO:0032876--P:negative regulation of DNA endoreduplication
GO:0008284--P:positive regulation of cell proliferation
GO:0080038--P:positive regulation of cytokinin-activated signaling pathway
GO:0045931--P:positive regulation of mitotic cell cycle
GO:0010082--P:regulation of root meristem growth

KEGG

tcc:TCM_031645

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	49.48	4.00e-55	206.00
IUUC-Atr-002438	Amborella trichopoda	52.55	1.00e-68	252.00
IUUC-Aca-004433	Anolis carolinensis	26.20	4.00e-09	53.90
IUUC-Aly-006133	Arabidopsis lyrata	57.79	4.00e-83	300.00
IUUC-Ath-007424	Arabidopsis thaliana	58.44	2.00e-84	304.00
IUUC-Acl-008011	Aspergillus clavatus	34.43	3.00e-03	35.80
IUUC-Afu-008893	Aspergillus fumigatus	31.65	3.00e-03	35.80
IUUC-Ang-009587	Aspergillus niger	30.68	5.00e-03	35.40
IUUC-Ate-010326	Aspergillus terreus	33.75	1.00e-03	38.10
IUUC-Ame-010902	Astyanax mexicanus	26.06	2.00e-10	58.20
IUUC-Bgr-012088	Blumeria graminis	30.85	8.00e-06	43.90
IUUC-Bta-013397	Bos taurus	35.29	1.00e-03	35.00
IUUC-Bci-013738	Botrytis cinerea	29.87	9.00e-05	40.80
IUUC-Bdi-014403	Brachypodium distachyon	46.15	7.00e-58	216.00
IUUC-Bol-015454	Brassica oleracea	58.19	3.00e-83	300.00
IUUC-Bra-017093	Brassica rapa	49.09	6.00e-68	249.00
IUUC-Cel-018588	Caenorhabditis elegans	28.17	6.00e-04	36.60
IUUC-Cja-019246	Callithrix jacchus	34.85	5.00e-05	40.40
IUUC-Cpo-021670	Cavia porcellus	22.41	1.00e-03	36.20
IUUC-Csa-023982	Chlorocebus sabaeus	35.71	1.00e-05	42.40
IUUC-Cin-025127	Ciona intestinalis	23.50	2.00e-06	45.10
IUUC-Cgl-026430	Colletotrichum gloeosporioides	31.88	6.00e-05	40.80
IUUC-Cne-026806	Cryptococcus neoformans	25.76	1.00e-07	49.70
IUUC-Cme-027175	Cyanidioschyzon merolae	29.58	5.00e-05	41.20
IUUC-Dre-028325	Danio rerio	25.65	8.00e-08	49.70
IUUC-Dno-029735	Dasypus novemcinctus	24.87	3.00e-07	47.80
IUUC-Dse-031273	Dothistroma septosporum	40.54	6.00e-11	61.20
IUUC-Dme-031933	Drosophila melanogaster	27.64	9.00e-07	46.20
IUUC-Ete-032838	Echinops telfairi	37.93	2.00e-04	37.70
IUUC-Eca-034371	Equus caballus	26.63	4.00e-08	50.80
IUUC-Eeu-035258	Erinaceus europaeus	33.33	6.00e-04	36.60
IUUC-Fal-037038	Ficedula albicollis	24.54	3.00e-09	54.70
IUUC-Fox-037843	Fusarium oxysporum	31.82	2.00e-07	49.30
IUUC-Fso-038272	Fusarium solani	34.33	6.00e-07	47.80
IUUC-Ggr-040059	Gaeumannomyces graminis	40.35	1.00e-06	47.00
IUUC-Gga-040737	Gallus gallus	25.60	2.00e-03	35.40
IUUC-Gac-042591	Gasterosteus aculeatus	22.12	4.00e-07	47.40
IUUC-Gma-043177	Glycine max	51.95	5.00e-70	256.00
IUUC-Ggo-045206	Gorilla gorilla	33.33	8.00e-06	43.10
IUUC-Hsa-046704	Homo sapiens	33.33	7.00e-06	43.10
IUUC-Hvu-047252	Hordeum vulgare	52.45	1.00e-61	228.00
IUUC-Itr-048972	Ictidomys tridecemlineatus	35.29	8.00e-04	35.00
IUUC-Lpe-051150	Leersia perrieri	48.26	8.00e-68	249.00
IUUC-Loc-052687	Lepisosteus oculatus	25.58	1.00e-08	52.80
IUUC-Lma-053255	Leptosphaeria maculans	33.85	5.00e-05	42.00
IUUC-Laf-054270	Loxodonta africana	25.29	1.00e-05	42.40
IUUC-Mcc-054757	Macaca mulatta	35.71	1.00e-05	42.40
IUUC-Mor-057028	Magnaporthe oryzae	30.67	2.00e-06	46.20
IUUC-Mpo-057462	Magnaporthe poae	44.23	1.00e-07	50.10
IUUC-Mtr-058011	Medicago truncatula	48.19	1.00e-70	258.00
IUUC-Mla-059014	Melampsora laricipopulina	25.36	6.00e-05	40.80
IUUC-Mvi-060511	Microbotryum violaceum	31.63	6.00e-06	44.30
IUUC-Mmr-061584	Microcebus murinus	35.29	2.00e-03	35.00
IUUC-Mdo-061863	Monodelphis domestica	25.33	3.00e-07	47.80
IUUC-Mmu-064413	Mus musculus	25.14	1.00e-05	42.40
IUUC-Mac-065639	Musa acuminata	51.08	2.00e-65	241.00
IUUC-Mlu-068198	Myotis lucifugus	25.93	4.00e-07	47.40
IUUC-Nfi-068508	Neosartorya fischeri	34.62	5.00e-04	38.50
IUUC-Ncr-068773	Neurospora crassa	34.94	1.00e-09	56.60
IUUC-Nle-070109	Nomascus leucogenys	33.33	2.00e-05	42.40
IUUC-Ont-071575	Oreochromis niloticus	23.66	4.00e-08	50.80
IUUC-Oba-075725	Oryza barthii	53.30	1.00e-58	218.00
IUUC-Obr-076506	Oryza brachyantha	60.00	3.00e-62	230.00
IUUC-Ogl-077564	Oryza glaberrima	54.44	2.00e-50	190.00
IUUC-Ogu-079018	Oryza glumaepatula	53.30	2.00e-58	218.00
IUUC-Oin-079792	Oryza indica	54.40	7.00e-61	225.00
IUUC-Olo-080864	Oryza longistaminata	43.14	2.00e-19	87.00
IUUC-Ome-081426	Oryza meridionalis	54.92	5.00e-61	226.00
IUUC-Oni-082286	Oryza nivara	53.81	3.00e-59	220.00
IUUC-Opu-083586	Oryza punctata	53.37	5.00e-59	219.00
IUUC-Oru-085158	Oryza rufipogon	53.81	3.00e-59	220.00
IUUC-Osa-085872	Oryza sativa	48.57	7.00e-14	68.20
IUUC-Olu-087903	Ostreococcus lucimarinus	44.00	1.00e-05	42.70
IUUC-Oga-087925	Otolemur garnettii	35.29	2.00e-03	35.40
IUUC-Oar-090138	Ovis aries	35.29	2.00e-03	35.00
IUUC-Ptr-091582	Pan troglodytes	33.33	7.00e-06	43.10
IUUC-Pan-092890	Papio anubis	35.71	1.00e-05	42.40
IUUC-Psi-093714	Pelodiscus sinensis	26.39	4.00e-08	50.80
IUUC-Pma-094198	Petromyzon marinus	33.08	1.00e-10	58.20
IUUC-Pno-094931	Phaeosphaeria nodorum	32.93	2.00e-07	49.70
IUUC-Ppa-095570	Physcomitrella patens	37.70	2.00e-48	184.00
IUUC-Pab-098005	Pongo abelii	33.33	8.00e-06	43.10
IUUC-Pop-099559	Populus trichocarpa	58.54	1.00e-85	308.00
IUUC-Ppe-101873	Prunus persica	63.45	2.00e-90	324.00
IUUC-Pva-102951	Pteropus vampyrus	27.27	1.00e-07	49.30
IUUC-Pte-104390	Pyrenophora teres	26.25	2.00e-07	49.30
IUUC-Pyt-104633	Pyrenophora triticirepentis	32.43	2.00e-06	46.20
IUUC-Rno-105346	Rattus norvegicus	25.71	7.00e-06	43.10
IUUC-Sce-106198	Saccharomyces cerevisiae	28.12	7.00e-05	40.00
IUUC-Sha-107586	Sarcophilus harrisii	30.77	1.00e-03	35.40
IUUC-Sja-107983	Schizosaccharomyces japonicus	31.75	3.00e-09	54.70
IUUC-Spo-108327	Schizosaccharomyces pombe	27.46	7.00e-09	53.50
IUUC-Ssl-108555	Sclerotinia sclerotiorum	33.75	2.00e-06	46.20
IUUC-Smo-109438	Selaginella moellendorffii	37.67	7.00e-38	149.00
IUUC-Sit-109919	Setaria italica	53.64	6.00e-71	259.00
IUUC-Sly-111667	Solanum lycopersicum	55.19	2.00e-81	294.00
IUUC-Stu-112211	Solanum tuberosum	57.50	1.00e-84	305.00
IUUC-Sbi-113916	Sorghum bicolor	55.07	6.00e-71	259.00
IUUC-Sre-115187	Sporisorium reilianum	24.08	6.00e-11	60.80
IUUC-Tgu-116472	Taeniopygia guttata	24.87	2.00e-06	45.10
IUUC-Tru-117771	Takifugu rubripes	32.67	2.00e-05	42.00
IUUC-Tni-119821	Tetraodon nigroviridis	25.45	5.00e-11	60.10
IUUC-Tre-122049	Trichoderma reesei	38.46	5.00e-07	47.80
IUUC-Tvi-122642	Trichoderma virens	38.98	8.00e-08	50.40
IUUC-Tae-122969	Triticum aestivum	49.55	9.00e-63	232.00
IUUC-Tur-126346	Triticum urartu	50.52	5.00e-55	206.00
IUUC-Tme-126988	Tuber melanosporum	27.94	7.00e-11	60.50
IUUC-Tbe-127676	Tupaia belangeri	35.09	2.00e-04	38.10
IUUC-Ttr-128602	Tursiops truncatus	30.21	1.00e-05	42.70
IUUC-Uma-129520	Ustilago maydis	27.94	3.00e-08	52.00
IUUC-Vpa-130510	Vicugna pacos	25.93	2.00e-05	42.00
IUUC-Vvi-131486	Vitis vinifera	66.02	7.00e-83	299.00
IUUC-Yli-134676	Yarrowia lipolytica	31.17	2.00e-07	48.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence