iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114319

UUCD1 version

UUC-SoB-01714

Ensembl Protein ID

Sb09g025110.1

UniProt Accession

A0A1B6P9A4; A0A1B6P9A4_SORBI

Genbank Protein ID

KXG22316.1; KXG22317.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768; CM000768

Gene Name

SORBI_009G192300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g025110	Sb09g025110.1	Sb09g025110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-77	262.0	23	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelw.kskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           GlkNlgNtCY+NSvLQcL+++p+l+ ++l  +++  +++  p+ +k++  + l+  ++ l+  +     sp ++++++  +ae+f+  +q+Da+Ef
   Q: 23   GLKNLGNTCYLNSVLQCLASTPPLATFCLAsRHSILCKKVFPNRDKECAFCVLELQIARLLrADAGALDSPAKVIRCMPLFAEHFRWGRQEDAHEF 118
           9***************************997777778888888888988888888888888567777789************************** PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcL 191
           l++++d+ +++  +     ++++   +  ++ +  e+   +    ++ ++F+g l sq+kcl c+ +s+++++ +d+sl++pg++     s+ d+L
   Q: 119  LRYVVDACHTAGLR----IRKRL--PAAGASGNCGEDGRAQAACLVMRETFGGALLSQVKCLVCKGESNKTDEIMDISLDLPGSS-----SVADAL 203
           **********9833....22222..222233444555566666677889************************************.....9***** PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           + f+++e leg+nky+ce+ckk++ a+k++ + + P+vL+++LkRf    e+ +  kin+++ef++ L ls  + +++++q+ +  Y+L++ +vHs
   Q: 204  ARFFQPEILEGANKYSCERCKKLTSARKQMFMLRAPKVLVIQLKRF----EGINGGKINRNIEFKEILGLSDCMYNKNKNQDPQPVYNLFGCIVHS 295
           **********************************************....667789****************99999999999************* PP
   S: 288  G.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfY 335
           G s++sGHY+ayvk++ g+W++++Ds+V+ ++ ++vl+   ++ Y+lfY
   Q: 296  GlSPESGHYYAYVKDSIGQWFCCNDSHVSLSSSQNVLS---EKVYILFY 341
           **************************************...******** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAPTAEPSSP PPQRRPRTGP PPGLKNLGNT CYLNSVLQCL ASTPPLATFC LASRHSILCK 60
KVFPNRDKEC AFCVLELQIA RLLRADAGAL DSPAKVIRCM PLFAEHFRWG RQEDAHEFLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGCTCAAT CCGCGGGCCC ATCGCAATTC GCAACCCGAA CCAACTCTTC ACTCCCTTCT 60
CTACCGAGCT CCGAGTTCCG ACCCCGAGGC GAGGGGGAAA AACCAGACTC CTCGCTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001017	Aegilops tauschii	60.35	0.00e+00	657.00
IUUC-Atr-002832	Amborella trichopoda	52.20	1.00e-114	406.00
IUUC-Aly-005983	Arabidopsis lyrata	41.06	1.00e-117	416.00
IUUC-Ath-006707	Arabidopsis thaliana	41.27	2.00e-116	412.00
IUUC-Bdi-014044	Brachypodium distachyon	65.29	0.00e+00	752.00
IUUC-Bol-016356	Brassica oleracea	39.91	8.00e-110	390.00
IUUC-Bra-018096	Brassica rapa	39.77	4.00e-110	391.00
IUUC-Gma-043410	Glycine max	40.87	1.00e-118	419.00
IUUC-Hvu-047673	Hordeum vulgare	59.08	5.00e-152	530.00
IUUC-Lpe-050888	Leersia perrieri	60.45	0.00e+00	739.00
IUUC-Mtr-058396	Medicago truncatula	40.67	1.00e-117	416.00
IUUC-Mac-065596	Musa acuminata	50.46	1.00e-154	539.00
IUUC-Oba-075223	Oryza barthii	63.40	0.00e+00	748.00
IUUC-Obr-076589	Oryza brachyantha	61.84	0.00e+00	709.00
IUUC-Ogl-077769	Oryza glaberrima	63.40	0.00e+00	748.00
IUUC-Ogu-078416	Oryza glumaepatula	62.07	0.00e+00	688.00
IUUC-Oin-079451	Oryza indica	63.40	0.00e+00	753.00
IUUC-Olo-080569	Oryza longistaminata	63.55	0.00e+00	757.00
IUUC-Ome-081320	Oryza meridionalis	62.56	0.00e+00	693.00
IUUC-Oni-082823	Oryza nivara	61.91	0.00e+00	687.00
IUUC-Opu-083432	Oryza punctata	58.85	0.00e+00	666.00
IUUC-Oru-084652	Oryza rufipogon	57.21	3.00e-176	610.00
IUUC-Osa-085846	Oryza sativa	63.40	0.00e+00	747.00
IUUC-Ppa-095241	Physcomitrella patens	52.29	2.00e-98	352.00
IUUC-Pop-098875	Populus trichocarpa	59.13	2.00e-115	408.00
IUUC-Ppe-101980	Prunus persica	57.60	3.00e-110	391.00
IUUC-Smo-108788	Selaginella moellendorffii	50.93	3.00e-90	323.00
IUUC-Sit-109696	Setaria italica	76.22	0.00e+00	903.00
IUUC-Sly-111085	Solanum lycopersicum	42.79	2.00e-112	398.00
IUUC-Stu-111972	Solanum tuberosum	45.16	1.00e-111	396.00
IUUC-Tca-121693	Theobroma cacao	48.52	3.00e-111	395.00
IUUC-Tae-125372	Triticum aestivum	64.81	0.00e+00	783.00
IUUC-Tur-126469	Triticum urartu	62.04	0.00e+00	702.00
IUUC-Vvi-131135	Vitis vinifera	42.07	2.00e-120	425.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence