iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005645

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348720

Gene Name

CHR4; ARALYDRAFT_917093

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_800493.1	scaffold_800493.1	scaffold_800493.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.30e-09	36.2	78	120

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +C+ gg+    l++C+ C + +H aCl+++  +  pn + wiCpkC+
   Q: 78   CVICDLGGD----LLCCDSCPRTYHTACLNPP-LKRIPNGK-WICPKCS 120
           *********....*******************.*******7.******7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKDSGSEMIN RDWVMKQKRR KLPSILDLLD QKVDSSVAFD SSEYTSSAKP TKHRLKTDLT 60
PERNSSKRKG NDGNYFECVI CDLGGDLLCC DSCPRTYHTA CLNPPLKRIP NGKWICPKCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATGAAAAC AGAAGTAGAA GATGAAAGAT TCAGGAAGTG AAATGATTAA TAGAGATTGG 60
GTCATGAAGC AGAAACGAAG AAAACTTCCG TCTATACTGG ATTTATTAGA CCAAAAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009057--Homeobox-like
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_917093

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	38.45	7.00e-140	491.00
IUUC-Apl-003406	Anas platyrhynchos	38.86	9.00e-140	491.00
IUUC-Aca-004671	Anolis carolinensis	42.19	9.00e-143	501.00
IUUC-Ath-007406	Arabidopsis thaliana	90.24	0.00e+00	3720.00
IUUC-Ame-011352	Astyanax mexicanus	39.84	2.00e-146	514.00
IUUC-Bta-012868	Bos taurus	45.38	4.00e-143	502.00
IUUC-Bol-016073	Brassica oleracea	77.09	0.00e+00	3175.00
IUUC-Bra-016724	Brassica rapa	79.09	0.00e+00	3211.00
IUUC-Cel-018683	Caenorhabditis elegans	41.21	2.00e-134	473.00
IUUC-Cja-019018	Callithrix jacchus	45.09	6.00e-143	502.00
IUUC-Cfa-021055	Canis familiaris	45.38	8.00e-143	501.00
IUUC-Cpo-021523	Cavia porcellus	45.23	9.00e-143	501.00
IUUC-Csa-023084	Chlorocebus sabaeus	38.88	1.00e-142	501.00
IUUC-Cho-024361	Choloepus hoffmanni	44.54	4.00e-120	426.00
IUUC-Csv-025847	Ciona savignyi	36.54	4.00e-135	476.00
IUUC-Dre-028043	Danio rerio	39.98	5.00e-143	502.00
IUUC-Dno-029923	Dasypus novemcinctus	41.89	3.00e-139	489.00
IUUC-Dor-030167	Dipodomys ordii	38.99	4.00e-142	499.00
IUUC-Dme-032150	Drosophila melanogaster	40.11	1.00e-135	478.00
IUUC-Ete-032757	Echinops telfairi	43.70	1.00e-118	421.00
IUUC-Eca-034372	Equus caballus	38.45	1.00e-140	494.00
IUUC-Eeu-034634	Erinaceus europaeus	48.52	2.00e-90	327.00
IUUC-Fca-036048	Felis catus	38.72	2.00e-140	493.00
IUUC-Fal-037282	Ficedula albicollis	41.62	1.00e-139	491.00
IUUC-Gmo-038957	Gadus morhua	41.01	3.00e-139	489.00
IUUC-Gga-040607	Gallus gallus	38.61	2.00e-142	499.00
IUUC-Gac-041375	Gasterosteus aculeatus	41.90	8.00e-150	525.00
IUUC-Gma-043999	Glycine max	46.29	4.00e-167	582.00
IUUC-Ggo-044514	Gorilla gorilla	38.99	9.00e-143	501.00
IUUC-Hsa-046181	Homo sapiens	38.99	7.00e-143	501.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	45.09	4.00e-142	499.00
IUUC-Lch-050343	Latimeria chalumnae	38.23	1.00e-145	511.00
IUUC-Loc-052383	Lepisosteus oculatus	38.10	7.00e-134	472.00
IUUC-Laf-053749	Loxodonta africana	39.01	2.00e-142	500.00
IUUC-Mcc-055856	Macaca mulatta	38.99	5.00e-143	502.00
IUUC-Meu-056292	Macropus eugenii	33.88	2.00e-48	188.00
IUUC-Mga-059630	Meleagris gallopavo	39.12	1.00e-142	501.00
IUUC-Mmr-060986	Microcebus murinus	38.90	2.00e-141	497.00
IUUC-Mdo-062971	Monodelphis domestica	44.80	1.00e-139	491.00
IUUC-Mmu-063644	Mus musculus	38.92	1.00e-142	501.00
IUUC-Mpu-065809	Mustela putorius furo	45.38	8.00e-143	501.00
IUUC-Mlu-067355	Myotis lucifugus	45.09	1.00e-142	501.00
IUUC-Nle-069824	Nomascus leucogenys	39.47	2.00e-144	507.00
IUUC-Opr-070960	Ochotona princeps	43.99	4.00e-135	476.00
IUUC-Ont-072418	Oreochromis niloticus	44.28	2.00e-142	500.00
IUUC-Oan-072885	Ornithorhynchus anatinus	47.90	8.00e-103	368.00
IUUC-Ocu-074438	Oryctolagus cuniculus	45.23	2.00e-142	500.00
IUUC-Ola-086880	Oryzias latipes	44.33	2.00e-142	500.00
IUUC-Oga-088775	Otolemur garnettii	38.78	3.00e-141	496.00
IUUC-Oar-089784	Ovis aries	45.38	6.00e-143	502.00
IUUC-Ptr-090586	Pan troglodytes	38.88	7.00e-142	498.00
IUUC-Pan-092282	Papio anubis	38.99	8.00e-143	501.00
IUUC-Psi-093007	Pelodiscus sinensis	38.97	1.00e-141	497.00
IUUC-Ppa-095491	Physcomitrella patens	61.17	0.00e+00	954.00
IUUC-Pfo-096265	Poecilia formosa	39.19	4.00e-149	523.00
IUUC-Pab-097677	Pongo abelii	38.99	1.00e-142	501.00
IUUC-Pca-100829	Procavia capensis	48.00	2.00e-136	481.00
IUUC-Pva-103186	Pteropus vampyrus	42.24	1.00e-142	501.00
IUUC-Rno-105378	Rattus norvegicus	38.50	1.00e-140	494.00
IUUC-Sha-107350	Sarcophilus harrisii	38.66	8.00e-142	498.00
IUUC-Smo-108946	Selaginella moellendorffii	54.40	0.00e+00	1021.00
IUUC-Sly-110976	Solanum lycopersicum	46.51	4.00e-163	568.00
IUUC-Ssc-116303	Sus scrofa	38.78	7.00e-141	494.00
IUUC-Tgu-116779	Taeniopygia guttata	43.70	2.00e-138	487.00
IUUC-Tru-118648	Takifugu rubripes	40.11	4.00e-153	536.00
IUUC-Tsy-119261	Tarsius syrichta	43.61	2.00e-124	440.00
IUUC-Tni-120039	Tetraodon nigroviridis	39.55	9.00e-147	514.00
IUUC-Tbe-128117	Tupaia belangeri	40.23	4.00e-85	310.00
IUUC-Ttr-128301	Tursiops truncatus	38.06	2.00e-136	480.00
IUUC-Vpa-130209	Vicugna pacos	47.54	3.00e-72	267.00
IUUC-Vvi-130849	Vitis vinifera	45.28	3.00e-160	558.00
IUUC-Xtr-132668	Xenopus tropicalis	43.50	4.00e-139	489.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence