iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014851

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100846324; BRADI_3g38610

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G38610	BRADI3G38610.1	BRADI3G38610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-33	115.1	272	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++flCpI+le+M+dPv+++sG++y+r+sI++wl+sg++tcP+trqpl++ +l Pn++l++li +wce++++
   Q: 272  IPDDFLCPITLEIMTDPVIVASGQSYERRSIQRWLDSGERTCPKTRQPLAHLSLAPNYALKNLILQWCEKHKV 344
           89********************************************************************987 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPQPALPPSS SDIPEPSGGG RELDDEDLVE ELLTTVNSAR AYADFRRTQR KECHSLLRWL 60
QLVLPLLEEL RDSSPRLTDN AYARLALLGR AFAAARRLLR SCHDGSKIFL ALESEAVLGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCCAGC CGGCGCTGCC TCCGTCGTCG TCGGACATCC CGGAGCCCTC GGGGGGCGGC 60
CGGGAGCTGG ACGACGAGGA CCTGGTGGAG GAGCTGCTGA CCACCGTGAA CTCGGCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100846324

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000398	Aegilops tauschii	86.22	0.00e+00	1027.00
IUUC-Atr-002787	Amborella trichopoda	57.32	0.00e+00	679.00
IUUC-Aly-006301	Arabidopsis lyrata	52.02	4.00e-178	617.00
IUUC-Bol-016076	Brassica oleracea	52.35	1.00e-180	625.00
IUUC-Bra-017350	Brassica rapa	52.03	4.00e-178	617.00
IUUC-Hvu-047325	Hordeum vulgare	86.53	0.00e+00	1027.00
IUUC-Lpe-051266	Leersia perrieri	77.37	0.00e+00	924.00
IUUC-Mac-064853	Musa acuminata	51.37	1.00e-163	568.00
IUUC-Oba-075533	Oryza barthii	81.05	0.00e+00	913.00
IUUC-Obr-076561	Oryza brachyantha	81.34	0.00e+00	904.00
IUUC-Ogl-077209	Oryza glaberrima	81.05	0.00e+00	913.00
IUUC-Ogu-078607	Oryza glumaepatula	81.37	0.00e+00	916.00
IUUC-Oin-080162	Oryza indica	81.37	0.00e+00	916.00
IUUC-Olo-080856	Oryza longistaminata	81.21	0.00e+00	915.00
IUUC-Ome-081763	Oryza meridionalis	81.54	0.00e+00	916.00
IUUC-Oni-082893	Oryza nivara	81.37	0.00e+00	916.00
IUUC-Opu-084068	Oryza punctata	81.24	0.00e+00	919.00
IUUC-Oru-085267	Oryza rufipogon	81.37	0.00e+00	916.00
IUUC-Osa-085448	Oryza sativa	81.37	0.00e+00	916.00
IUUC-Sit-110463	Setaria italica	80.53	0.00e+00	869.00
IUUC-Sbi-114691	Sorghum bicolor	78.01	0.00e+00	858.00
IUUC-Tca-121039	Theobroma cacao	58.36	0.00e+00	673.00
IUUC-Tae-124926	Triticum aestivum	87.31	0.00e+00	1048.00
IUUC-Tur-126071	Triticum urartu	77.24	0.00e+00	883.00
IUUC-Vvi-131187	Vitis vinifera	58.74	0.00e+00	663.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence