iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043462

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000837

Gene Name

LOC100784564; GLYMA_04G179300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G35020	GLYMA04G35020.1	GLYMA04G35020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-16	61.2	27	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +vp+ef CpIs+ lM+dPvv++sG+t++r +++ + + + +    ++++ + ++++Pnl+++ +i +wc+ ++
   Q: 27   QVPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKDLNFSPKLDDGTRPDFSTIIPNLAIKTTILHWCDNSR 99
           69*********************************99999988888888899999**************9875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGGNGKHRWK FSFHRSSSQT SNPDPNQVPK EFTCPISGSL MSDPVVVASG QTFERLAVQL 60
CKDLNFSPKL DDGTRPDFST IIPNLAIKTT ILHWCDNSRT QPPLPPDYAS LERHVREEKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTTCTAGA AGGAACAGCA AAAAAAAGAA CAACAAAGAA ACCAATTTGG AGAGGCTTGT 60
GTGACTACAA TGAAAGCATG TTTGTTGGAA GACTGGGTCA CTCTCTGGAG GGAGAGATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100784564

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005887	Arabidopsis lyrata	59.41	3.00e-170	591.00
IUUC-Ath-007165	Arabidopsis thaliana	58.09	2.00e-163	568.00
IUUC-Bol-015998	Brassica oleracea	56.99	6.00e-141	494.00
IUUC-Bra-017987	Brassica rapa	60.20	2.00e-141	496.00
IUUC-Hvu-047842	Hordeum vulgare	39.75	2.00e-20	94.00
IUUC-Mmr-061778	Microcebus murinus	28.37	4.00e-09	55.50
IUUC-Pop-099467	Populus trichocarpa	65.97	1.00e-173	602.00
IUUC-Stu-112202	Solanum tuberosum	52.99	3.00e-122	431.00
IUUC-Tca-121713	Theobroma cacao	62.15	7.00e-173	600.00
IUUC-Uma-129575	Ustilago maydis	36.00	1.30e+00	28.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence