iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095595

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545243

Gene Name

PHYPADRAFT_152141

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S355_60V6	PP1S355_60V6.1	PP1S355_60V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-25	89.3	82	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            p eflCpIs+ lM +Pv+++sGi+y+r++I+ w+++g++ c++t+q l++ +l+Pn  l ++iq wc ++++
   Q: 82   FPTEFLCPISKSLMAEPVIVASGISYERQCIQIWFQQGNRHCFKTGQILDHFNLTPNQNLLSTIQTWCGKHKI 154
           599******************************************************************9987 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MYRMHLGRKK SKDAKKEENG EASTADETGG GALDSSSPSG SGITPGSSPR IANGAHGEGM 60
ADSPKKSSWS FLHKSRKSGK NFPTEFLCPI SKSLMAEPVI VASGISYERQ CIQIWFQQGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATCGCA TGCATTTAGG GAGGAAGAAA TCTAAAGATG CTAAGAAGGA GGAGAATGGC 60
GAGGCATCTA CCGCCGACGA GACTGGCGGA GGAGCGCTAG ATTCTTCCTC CCCCAGTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ppp:PHYPADRAFT_152141

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	32.27	8.00e-64	237.00
IUUC-Aly-005887	Arabidopsis lyrata	42.28	6.00e-51	194.00
IUUC-Bta-013555	Bos taurus	28.99	6.00e-10	59.70
IUUC-Bdi-014649	Brachypodium distachyon	38.99	1.00e-33	136.00
IUUC-Bol-015998	Brassica oleracea	40.27	2.00e-42	166.00
IUUC-Bra-017987	Brassica rapa	41.20	2.00e-44	172.00
IUUC-Gma-043729	Glycine max	45.86	4.00e-56	211.00
IUUC-Ggo-045030	Gorilla gorilla	28.99	7.00e-10	59.30
IUUC-Itr-048617	Ictidomys tridecemlineatus	31.45	1.00e-08	55.10
IUUC-Mtr-057660	Medicago truncatula	44.41	7.00e-44	171.00
IUUC-Mac-064827	Musa acuminata	43.10	5.00e-35	141.00
IUUC-Mlu-067208	Myotis lucifugus	28.99	6.00e-10	59.70
IUUC-Pop-099467	Populus trichocarpa	45.15	2.00e-50	192.00
IUUC-Ppe-101810	Prunus persica	43.77	8.00e-47	180.00
IUUC-Smo-109242	Selaginella moellendorffii	39.31	1.00e-46	179.00
IUUC-Sit-109782	Setaria italica	42.03	2.00e-36	145.00
IUUC-Sly-111131	Solanum lycopersicum	42.41	1.00e-56	213.00
IUUC-Stu-112864	Solanum tuberosum	47.42	1.00e-54	206.00
IUUC-Vpa-130794	Vicugna pacos	28.57	2.00e-10	61.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence