iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095383

Ensembl Protein ID

PP1S148_106V6.1

UniProt Accession

A9SH23; A9SH23_PHYPA

Genbank Protein ID

EDQ69525.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544967

Gene Name

PHYPADRAFT_129788

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S148_106V6	PP1S148_106V6.1	PP1S148_106V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-32	110.7	293	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp++f+CpIsl+lM+dPv++++G+ty+r++I++wl+sg+ktcP+t+  lt+  l+Pn++lr++i +wce+ +
   Q: 293  VPDDFKCPISLDLMKDPVIVATGQTYERACIQRWLDSGHKTCPKTGVLLTHLGLTPNYSLRSVIAQWCESVG 364
           89******************************************************************9876 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MADSHLSQVQ LIQSLIDVVN TIGLKGDYIK SHKKECALLT RRVKLLAPLF EELRESRQKM 60
SYKTCTALHD LEEALQSANK LLQMCHDGSK LYLVLERQAA AEQFDKVNAD LECALDALPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGACA GTCACCTGTC GCAAGTACAG CTGATTCAGT CCCTCATAGA CGTGGTTAAT 60
ACCATAGGTT TAAAAGGAGA TTATATCAAA AGCCACAAGA AGGAGTGTGC TTTGCTGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ppp:PHYPADRAFT_129788

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	49.91	4.00e-141	494.00
IUUC-Atr-002932	Amborella trichopoda	52.27	1.00e-176	612.00
IUUC-Aly-005681	Arabidopsis lyrata	50.68	5.00e-176	610.00
IUUC-Ath-007618	Arabidopsis thaliana	50.83	7.00e-176	609.00
IUUC-Bdi-014691	Brachypodium distachyon	49.41	6.00e-150	523.00
IUUC-Bol-015254	Brassica oleracea	50.38	8.00e-174	603.00
IUUC-Bra-017857	Brassica rapa	50.83	9.00e-174	602.00
IUUC-Cel-018336	Caenorhabditis elegans	33.87	6.00e-09	56.20
IUUC-Gma-043064	Glycine max	51.42	3.00e-173	601.00
IUUC-Hvu-047272	Hordeum vulgare	48.01	4.00e-146	510.00
IUUC-Lch-049908	Latimeria chalumnae	38.89	2.00e-09	57.40
IUUC-Lpe-051517	Leersia perrieri	49.49	2.00e-146	512.00
IUUC-Mtr-058332	Medicago truncatula	50.15	6.00e-169	586.00
IUUC-Mac-065438	Musa acuminata	45.44	2.00e-147	516.00
IUUC-Oba-075184	Oryza barthii	46.24	2.00e-150	525.00
IUUC-Obr-076590	Oryza brachyantha	45.43	6.00e-147	513.00
IUUC-Ogl-077386	Oryza glaberrima	46.24	2.00e-150	525.00
IUUC-Ogu-078326	Oryza glumaepatula	46.08	4.00e-150	524.00
IUUC-Oin-079724	Oryza indica	47.68	4.00e-151	527.00
IUUC-Olo-081001	Oryza longistaminata	46.08	7.00e-150	523.00
IUUC-Ome-081417	Oryza meridionalis	45.58	1.00e-151	529.00
IUUC-Oni-082439	Oryza nivara	48.90	2.00e-147	514.00
IUUC-Opu-083837	Oryza punctata	47.21	1.00e-150	525.00
IUUC-Oru-084885	Oryza rufipogon	46.08	2.00e-149	522.00
IUUC-Osa-085946	Oryza sativa	45.93	8.00e-149	520.00
IUUC-Ola-087527	Oryzias latipes	39.06	8.00e-12	63.20
IUUC-Olu-087884	Ostreococcus lucimarinus	58.21	2.00e-24	102.00
IUUC-Pop-098809	Populus trichocarpa	51.57	1.00e-176	612.00
IUUC-Ppe-102057	Prunus persica	51.48	1.00e-152	532.00
IUUC-Smo-109443	Selaginella moellendorffii	53.14	2.00e-172	598.00
IUUC-Sit-110392	Setaria italica	48.89	3.00e-140	491.00
IUUC-Sly-111594	Solanum lycopersicum	50.81	6.00e-174	603.00
IUUC-Stu-112876	Solanum tuberosum	50.00	2.00e-175	608.00
IUUC-Sbi-114550	Sorghum bicolor	47.99	7.00e-150	523.00
IUUC-Tca-121745	Theobroma cacao	50.51	2.00e-175	608.00
IUUC-Tae-124061	Triticum aestivum	48.82	4.00e-149	520.00
IUUC-Tur-126448	Triticum urartu	49.26	4.00e-147	514.00
IUUC-Tbe-127613	Tupaia belangeri	30.95	2.00e-07	51.20
IUUC-Vvi-131752	Vitis vinifera	50.98	2.00e-168	585.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence