iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074427

Ensembl Protein ID

ENSOCUP00000020032.1

UniProt Accession

G1TSL5; G1TSL5_RABIT

Protein Name

Uncharacterized protein

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000025709.2	ENSOCUT00000029609.2	ENSOCUP00000020032.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	98.05	1.00e-166	583.00	IUUC-Hsa-046680
UBD/Other/Other	98.05	1.00e-166	583.00	IUUC-Hsa-046680
UBD/Other/Other	48.22	1.00e-50	194.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTAAGCA AGCGGCCGGT ACCTGGAGCC CGAGGCCAGG CCCGGAACCG GGGCCTGGCG 60
GGGAAGGGAC GGGGCGGGCG CGGAGATGCC GAGTCACCCG GGCCGCAGCC TGGGGCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ocu:100351467

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	51.80	3.00e-66	244.00
IUUC-Aml-001398	Ailuropoda melanoleuca	98.04	5.00e-176	609.00
IUUC-Atr-002449	Amborella trichopoda	50.73	4.00e-56	211.00
IUUC-Apl-004065	Anas platyrhynchos	93.13	5.00e-143	499.00
IUUC-Aca-004973	Anolis carolinensis	92.83	2.00e-172	597.00
IUUC-Aly-005501	Arabidopsis lyrata	51.71	6.00e-68	250.00
IUUC-Ath-007324	Arabidopsis thaliana	53.48	1.00e-68	253.00
IUUC-Ago-007918	Ashbya gossypii	37.24	5.00e-54	204.00
IUUC-Acl-008362	Aspergillus clavatus	42.04	1.00e-66	246.00
IUUC-Afl-008690	Aspergillus flavus	54.17	1.00e-64	239.00
IUUC-Afu-008787	Aspergillus fumigatus	42.94	9.00e-65	240.00
IUUC-Ani-009385	Aspergillus nidulans	56.57	4.00e-57	215.00
IUUC-Ang-009709	Aspergillus niger	56.22	5.00e-64	238.00
IUUC-Aor-010240	Aspergillus oryzae	54.17	1.00e-64	239.00
IUUC-Ate-010551	Aspergillus terreus	56.04	8.00e-65	240.00
IUUC-Ame-011417	Astyanax mexicanus	88.96	3.00e-159	553.00
IUUC-Bgr-011986	Blumeria graminis	56.25	6.00e-62	230.00
IUUC-Bta-012559	Bos taurus	98.24	1.00e-129	454.00
IUUC-Bci-013767	Botrytis cinerea	56.08	3.00e-58	218.00
IUUC-Bdi-014579	Brachypodium distachyon	51.82	8.00e-62	230.00
IUUC-Bol-015824	Brassica oleracea	44.41	2.00e-66	246.00
IUUC-Bra-016732	Brassica rapa	44.09	1.00e-66	246.00
IUUC-Cel-018590	Caenorhabditis elegans	40.80	1.00e-49	189.00
IUUC-Cja-019487	Callithrix jacchus	98.70	1.00e-177	614.00
IUUC-Cfa-020497	Canis familiaris	98.37	3.00e-177	613.00
IUUC-Cpo-022150	Cavia porcellus	97.71	2.00e-175	607.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	50.66	2.00e-58	218.00
IUUC-Csa-023602	Chlorocebus sabaeus	98.05	8.00e-177	612.00
IUUC-Cin-025594	Ciona intestinalis	57.05	1.00e-92	332.00
IUUC-Csv-026040	Ciona savignyi	54.95	3.00e-94	338.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	48.15	5.00e-52	197.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	2.00e-39	156.00
IUUC-Cme-027323	Cyanidioschyzon merolae	34.21	7.00e-43	167.00
IUUC-Dre-027987	Danio rerio	87.34	2.00e-154	537.00
IUUC-Dor-030294	Dipodomys ordii	97.07	1.00e-173	601.00
IUUC-Dse-031411	Dothistroma septosporum	37.65	8.00e-57	214.00
IUUC-Dme-031798	Drosophila melanogaster	56.65	4.00e-93	334.00
IUUC-Ete-032432	Echinops telfairi	96.74	2.00e-174	604.00
IUUC-Eca-034427	Equus caballus	98.05	8.00e-177	612.00
IUUC-Eeu-034917	Erinaceus europaeus	70.03	4.00e-111	394.00
IUUC-Fca-035380	Felis catus	98.37	3.00e-177	613.00
IUUC-Fal-037659	Ficedula albicollis	93.71	1.00e-167	581.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	4.00e-21	93.60
IUUC-Fso-038111	Fusarium solani	45.81	2.00e-52	199.00
IUUC-Gmo-039298	Gadus morhua	86.08	7.00e-146	509.00
IUUC-Ggr-039771	Gaeumannomyces graminis	51.03	2.00e-56	212.00
IUUC-Gga-040313	Gallus gallus	94.46	1.00e-171	595.00
IUUC-Gac-042009	Gasterosteus aculeatus	85.48	3.00e-147	514.00
IUUC-Gma-043844	Glycine max	53.14	5.00e-69	254.00
IUUC-Ggo-044639	Gorilla gorilla	87.46	6.00e-171	593.00
IUUC-Hsa-046680	Homo sapiens	98.05	8.00e-177	612.00
IUUC-Hvu-047614	Hordeum vulgare	52.27	2.00e-66	245.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	98.04	5.00e-176	609.00
IUUC-Kpa-049136	Komagataella pastoris	36.57	3.00e-55	209.00
IUUC-Lch-050607	Latimeria chalumnae	87.75	5.00e-155	540.00
IUUC-Lpe-050726	Leersia perrieri	50.23	1.00e-61	230.00
IUUC-Loc-051848	Lepisosteus oculatus	89.00	1.00e-160	558.00
IUUC-Lma-053187	Leptosphaeria maculans	41.64	5.00e-65	241.00
IUUC-Laf-053569	Loxodonta africana	96.12	2.00e-172	597.00
IUUC-Mcc-055275	Macaca mulatta	98.05	2.00e-176	610.00
IUUC-Mor-056967	Magnaporthe oryzae	50.51	3.00e-57	215.00
IUUC-Mpo-057399	Magnaporthe poae	51.55	1.00e-56	213.00
IUUC-Mtr-058353	Medicago truncatula	50.87	6.00e-65	240.00
IUUC-Mla-058830	Melampsora laricipopulina	44.56	1.00e-42	167.00
IUUC-Mga-059803	Meleagris gallopavo	93.51	3.00e-143	500.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	3.00e-45	176.00
IUUC-Mmr-060573	Microcebus murinus	97.72	3.00e-176	610.00
IUUC-Mdo-062831	Monodelphis domestica	96.09	1.00e-173	601.00
IUUC-Mmu-064302	Mus musculus	97.72	2.00e-175	607.00
IUUC-Mac-065200	Musa acuminata	51.52	2.00e-65	242.00
IUUC-Mpu-065922	Mustela putorius furo	98.05	8.00e-177	612.00
IUUC-Mlu-068236	Myotis lucifugus	96.76	2.00e-174	603.00
IUUC-Nfi-068417	Neosartorya fischeri	42.94	7.00e-65	240.00
IUUC-Ncr-068747	Neurospora crassa	48.96	6.00e-54	204.00
IUUC-Nle-069948	Nomascus leucogenys	87.50	4.00e-172	597.00
IUUC-Opr-070919	Ochotona princeps	84.39	1.00e-140	492.00
IUUC-Ont-071467	Oreochromis niloticus	85.44	3.00e-151	527.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.36	2.00e-69	254.00
IUUC-Oba-075440	Oryza barthii	51.49	4.00e-67	248.00
IUUC-Obr-076275	Oryza brachyantha	51.15	5.00e-60	224.00
IUUC-Ogl-077237	Oryza glaberrima	51.49	3.00e-67	248.00
IUUC-Ogu-078934	Oryza glumaepatula	51.49	3.00e-67	248.00
IUUC-Oin-079475	Oryza indica	51.91	2.00e-67	249.00
IUUC-Olo-080285	Oryza longistaminata	59.64	4.00e-57	213.00
IUUC-Ome-081887	Oryza meridionalis	51.49	3.00e-67	248.00
IUUC-Oni-082064	Oryza nivara	51.91	1.00e-67	249.00
IUUC-Opu-083610	Oryza punctata	51.06	8.00e-67	246.00
IUUC-Oru-084911	Oryza rufipogon	44.76	4.00e-68	251.00
IUUC-Osa-085366	Oryza sativa	51.49	4.00e-67	248.00
IUUC-Ola-086846	Oryzias latipes	75.86	3.00e-139	488.00
IUUC-Olu-087879	Ostreococcus lucimarinus	45.42	8.00e-57	214.00
IUUC-Oga-089017	Otolemur garnettii	97.09	5.00e-174	603.00
IUUC-Oar-089970	Ovis aries	94.77	7.00e-169	585.00
IUUC-Ptr-091147	Pan troglodytes	88.67	9.00e-161	558.00
IUUC-Pan-091757	Papio anubis	90.58	7.00e-158	549.00
IUUC-Psi-093931	Pelodiscus sinensis	94.46	1.00e-171	594.00
IUUC-Pno-094775	Phaeosphaeria nodorum	48.62	2.00e-59	222.00
IUUC-Ppa-095156	Physcomitrella patens	51.34	1.00e-63	236.00
IUUC-Pfo-097295	Poecilia formosa	85.21	8.00e-151	526.00
IUUC-Pab-098537	Pongo abelii	98.05	8.00e-177	612.00
IUUC-Pop-099436	Populus trichocarpa	50.00	8.00e-67	246.00
IUUC-Pca-100631	Procavia capensis	84.93	7.00e-164	569.00
IUUC-Ppe-101259	Prunus persica	50.87	7.00e-67	247.00
IUUC-Pva-102679	Pteropus vampyrus	89.35	7.00e-158	549.00
IUUC-Pgr-103475	Puccinia graminis	45.59	8.00e-45	174.00
IUUC-Ptt-104012	Puccinia triticina	38.73	3.00e-32	132.00
IUUC-Pte-104071	Pyrenophora teres	51.43	4.00e-62	231.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	51.43	4.00e-62	231.00
IUUC-Rno-104858	Rattus norvegicus	97.07	6.00e-175	606.00
IUUC-Sce-106174	Saccharomyces cerevisiae	38.41	4.00e-54	204.00
IUUC-Sha-107075	Sarcophilus harrisii	96.73	2.00e-174	604.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	44.00	1.00e-60	226.00
IUUC-Spo-108259	Schizosaccharomyces pombe	46.32	1.00e-52	199.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	39.35	6.00e-51	194.00
IUUC-Smo-109290	Selaginella moellendorffii	54.15	4.00e-66	244.00
IUUC-Sit-109992	Setaria italica	51.06	1.00e-65	243.00
IUUC-Sly-110858	Solanum lycopersicum	52.47	5.00e-64	237.00
IUUC-Stu-112028	Solanum tuberosum	55.80	1.00e-58	219.00
IUUC-Sar-113061	Sorex araneus	97.07	2.00e-174	604.00
IUUC-Sbi-114882	Sorghum bicolor	44.90	5.00e-67	247.00
IUUC-Sre-115104	Sporisorium reilianum	47.12	2.00e-44	172.00
IUUC-Ssc-115403	Sus scrofa	98.05	2.00e-176	610.00
IUUC-Tgu-117013	Taeniopygia guttata	94.77	1.00e-171	595.00
IUUC-Tru-118307	Takifugu rubripes	86.69	2.00e-148	517.00
IUUC-Tsy-119309	Tarsius syrichta	85.92	8.00e-67	246.00
IUUC-Tni-120209	Tetraodon nigroviridis	86.08	2.00e-146	511.00
IUUC-Tca-121421	Theobroma cacao	52.17	4.00e-68	251.00
IUUC-Tre-122235	Trichoderma reesei	45.64	8.00e-52	197.00
IUUC-Tvi-122421	Trichoderma virens	45.59	2.00e-52	199.00
IUUC-Tae-124587	Triticum aestivum	51.80	2.00e-66	246.00
IUUC-Tur-126353	Triticum urartu	37.50	4.00e-25	109.00
IUUC-Tme-126918	Tuber melanosporum	53.65	3.00e-59	221.00
IUUC-Ttr-129286	Tursiops truncatus	88.72	6.00e-160	556.00
IUUC-Uma-129404	Ustilago maydis	48.17	1.00e-45	177.00
IUUC-Vda-129746	Verticillium dahliae	48.47	3.00e-53	202.00
IUUC-Vpa-130648	Vicugna pacos	98.04	3.00e-24	105.00
IUUC-Vvi-131301	Vitis vinifera	52.17	6.00e-66	244.00
IUUC-Xtr-132583	Xenopus tropicalis	90.55	6.00e-163	566.00
IUUC-Xma-133129	Xiphophorus maculatus	85.53	7.00e-151	526.00
IUUC-Yli-134515	Yarrowia lipolytica	46.19	2.00e-51	195.00
IUUC-Zma-135266	Zea mays	44.16	2.00e-66	245.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence