iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118670

Ensembl Protein ID

ENSTRUP00000045426.1

UniProt Accession

H2V887; H2V887_TAKRU

Protein Name

Uncharacterized protein

Gene Name

itga6a; itga6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000017719.1	ENSTRUT00000045576.1	ENSTRUP00000045424.1
ENSTRUG00000017719.1	ENSTRUT00000045577.1	ENSTRUP00000045425.1
ENSTRUG00000017719.1	ENSTRUT00000045578.1	ENSTRUP00000045426.1
ENSTRUG00000017719.1	ENSTRUT00000045579.1	ENSTRUP00000045427.1
ENSTRUG00000017719.1	ENSTRUT00000045580.1	ENSTRUP00000045428.1
ENSTRUG00000017719.1	ENSTRUT00000045581.1	ENSTRUP00000045429.1
ENSTRUG00000017719.1	ENSTRUT00000045582.1	ENSTRUP00000045430.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	30.77	1.70e+00	32.70	IUUC-Ath-007190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MHRQINPDKR ILLIGAPRAK ALGKQTSSFT GGLYKCEITP FKDCERVDFD NEENTQTEKK 60
ENQWMGVMVQ SQGPGGKIVT CAHRYQRRMF ANTPQESWDI TGRCYVLSQD LTIDVSSDED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGATCAAC TTCAGCGGAC ATTTACCCCA CCTGTCTGTG CGTTTGCAGG GTATGACCAG 60
AGGGGGCGCT GGGGGCATCC GCGCAGACTC CTGCAGGGGA GCGGTGCCGC TGCGGTTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0130--Cell adhesion
KW-0181--Complete proteome
KW-0401--Integrin
KW-0472--Membrane
KW-0675--Receptor
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR013517--FG-GAP
IPR013519--Int_alpha_beta-p
IPR000413--Integrin_alpha
IPR013649--Integrin_alpha-2
IPR018184--Integrin_alpha_C_CS
IPR032695--Integrin_dom

PROSITE

PS51470--FG_GAP
PS00242--INTEGRIN_ALPHA

Pfam

PF01839--FG-GAP
PF00357--Integrin_alpha
PF08441--Integrin_alpha2

PRINTS

PR01185--INTEGRINA

SMART

SM00191--Int_alpha

Gene Ontology

GO:0008305--C:integrin complex
GO:0007155--P:cell adhesion
GO:0007229--P:integrin-mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000804	Aegilops tauschii	39.47	1.80e-01	30.40
IUUC-Aly-006192	Arabidopsis lyrata	30.77	2.30e-02	32.70
IUUC-Ath-007190	Arabidopsis thaliana	30.77	3.40e-02	32.30
IUUC-Bra-017993	Brassica rapa	34.88	8.60e-02	31.60
IUUC-Dor-030973	Dipodomys ordii	31.22	1.00e-103	371.00
IUUC-Ete-032991	Echinops telfairi	31.64	1.00e-52	201.00
IUUC-Gac-041514	Gasterosteus aculeatus	74.12	0.00e+00	1576.00
IUUC-Loc-052912	Lepisosteus oculatus	25.52	3.00e-54	207.00
IUUC-Stu-112407	Solanum tuberosum	27.69	3.20e-01	29.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence