iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl ++  kd  ++lpC H fh  C+  w     + s+++ CPlCr
   Q: 26   CSVCLMRMeaKDVIKSLPCSHEFHSLCVDTW----FNVSRKICCPLCR 69
           9*****9987777899***************....99**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MKVLEKWLAL LYPRVQGGEG REEECCSVCL MRMEAKDVIK SLPCSHEFHS LCVDTWFNVS 60
RKICCPLCRF SPTTILLTDE LLLWFSSFHF

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACATTTACC AATTCATTAC AAGCAAAAAC TATCTTTAAA AGCAGAATTT AAGATAAGCT 60
GAATTATCTA GAGAGTCTTT CTTATCTTGA TATTTCTTCT GTTGGAATCA TCTATATATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G51325

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003149	Amborella trichopoda	43.30	4.00e-14	68.90
IUUC-Aly-005697	Arabidopsis lyrata	97.59	1.00e-43	166.00
IUUC-Bol-016411	Brassica oleracea	88.51	2.00e-41	158.00
IUUC-Bra-017132	Brassica rapa	88.51	3.00e-41	158.00
IUUC-Gma-042818	Glycine max	50.70	5.00e-15	72.40
IUUC-Mtr-058073	Medicago truncatula	48.61	8.00e-14	68.60
IUUC-Ppe-101424	Prunus persica	50.00	6.00e-17	78.60
IUUC-Tca-121024	Theobroma cacao	41.05	1.00e-14	70.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence