iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099451

UUCD1 version

UUC-PoT-00653

Ensembl Protein ID

POPTR_0007s10280.1

UniProt Accession

U5GAH5; U5GAH5_POPTR

Genbank Protein ID

ERP58460.1; ERP58461.1; ERP58462.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000343; CM000343; CM000343

Gene Name

POPTRDRAFT_278332; POPTR_0007s10280g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s10280	POPTR_0007s10280.1	POPTR_0007s10280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-30	105.2	236	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r+ I+ w++ g + cP+trq+l++++l+Pn+t+++li +wce+n++
   Q: 236  IPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIELGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNV 308
           8********************************************************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEISLLEVLL KTISTFLHLS KDDNISSDPV QKYYQKAEEI LKLLKPIFDA IVDSEVASDE 60
VLNKDFLELG RSVDELREIF ESWQPLSSKV YFVLQIESLT LKIRNLGLDS FQLLKSSHQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATAT CATTGTTAGA AGTGCTTCTC AAAACCATCT CTACCTTCTT ACATTTATCA 60
AAGGATGATA ACATCAGTTC TGATCCAGTT CAGAAGTACT ACCAGAAGGC AGAAGAGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0007s10280g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005938	Arabidopsis lyrata	56.10	0.00e+00	730.00
IUUC-Ath-007575	Arabidopsis thaliana	56.23	0.00e+00	706.00
IUUC-Bol-016192	Brassica oleracea	57.53	0.00e+00	698.00
IUUC-Bra-016628	Brassica rapa	55.95	0.00e+00	773.00
IUUC-Mac-064791	Musa acuminata	55.73	0.00e+00	699.00
IUUC-Ppe-101233	Prunus persica	77.83	0.00e+00	1070.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence