iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015762

Ensembl Protein ID

Bo8g100610.1

UniProt Accession

A0A0D3DVW0; A0A0D3DVW0_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g100610	Bo8g100610.1	Bo8g100610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.70e-30	104.5	233	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++++f Cp+sle+M+dPv+++sG+ty+++ I++w++ g k cP+trq+lt+++l+Pn+t+++li +wce+n++
   Q: 233  ILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIANWCETNDV 305
           6789******************************************************************987 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGTSALVDSI SSFLNLSSSR HIDLDPFEKY YKRVEELLIV LKPVADAAAT NSDLVSDERI 60
GKSFDDLTQD VDHSIDLFRS WHAFSSKVYF VLQIESLIPK MRETIVDTFH FLMSFESNLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAACGT CAGCTCTCGT CGACAGTATC TCTTCCTTTC TCAACCTCTC GTCTTCGAGA 60
CACATCGATT TAGACCCTTT TGAAAAGTAC TACAAGAGAG TCGAAGAGCT GCTCATAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002793	Amborella trichopoda	51.54	0.00e+00	762.00
IUUC-Aly-006261	Arabidopsis lyrata	86.54	0.00e+00	1357.00
IUUC-Ath-006925	Arabidopsis thaliana	85.85	0.00e+00	1353.00
IUUC-Bdi-014197	Brachypodium distachyon	49.40	0.00e+00	655.00
IUUC-Bra-018049	Brassica rapa	96.55	0.00e+00	1466.00
IUUC-Hvu-047089	Hordeum vulgare	49.53	0.00e+00	675.00
IUUC-Lpe-051326	Leersia perrieri	49.51	0.00e+00	635.00
IUUC-Mtr-057910	Medicago truncatula	55.66	0.00e+00	796.00
IUUC-Mac-064791	Musa acuminata	79.09	5.00e-129	454.00
IUUC-Oba-075484	Oryza barthii	50.24	2.00e-179	622.00
IUUC-Obr-076317	Oryza brachyantha	50.55	3.00e-176	612.00
IUUC-Ogl-077857	Oryza glaberrima	50.24	7.00e-180	624.00
IUUC-Ogu-078826	Oryza glumaepatula	50.12	0.00e+00	627.00
IUUC-Oin-079538	Oryza indica	50.37	0.00e+00	627.00
IUUC-Olo-080425	Oryza longistaminata	49.32	4.00e-171	595.00
IUUC-Ome-081524	Oryza meridionalis	50.37	0.00e+00	627.00
IUUC-Oni-082077	Oryza nivara	50.37	2.00e-180	625.00
IUUC-Opu-083165	Oryza punctata	50.61	0.00e+00	636.00
IUUC-Oru-085180	Oryza rufipogon	50.37	0.00e+00	636.00
IUUC-Osa-085315	Oryza sativa	50.37	0.00e+00	637.00
IUUC-Ppa-095522	Physcomitrella patens	65.85	4.00e-110	391.00
IUUC-Pop-099220	Populus trichocarpa	69.52	3.00e-153	535.00
IUUC-Sit-110349	Setaria italica	48.46	0.00e+00	648.00
IUUC-Sly-111082	Solanum lycopersicum	79.20	2.00e-147	516.00
IUUC-Stu-112751	Solanum tuberosum	54.02	0.00e+00	798.00
IUUC-Sbi-114085	Sorghum bicolor	71.67	2.00e-130	459.00
IUUC-Tca-121129	Theobroma cacao	61.75	0.00e+00	914.00
IUUC-Tae-124684	Triticum aestivum	48.47	0.00e+00	659.00
IUUC-Tur-126525	Triticum urartu	45.10	1.00e-174	606.00
IUUC-Vvi-131364	Vitis vinifera	56.12	0.00e+00	810.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence