iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076745

Ensembl Protein ID

OB12G24720.1

UniProt Accession

J3NER4; J3NER4_ORYBR

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB12G24720	OB12G24720.1	OB12G24720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.50e-17	63.5	135	229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt....................elknsevalkYeDedGDlvtlksDedldkavsllaskksllr 78
            vkvs++g+++++++dl+ ++++ dL +a++  +t                     l++se+ ++YeD+dGD++ l++D++++++v+      s++r
   Q: 135  LVKVSMDGAPYLRKVDLSIYTSYLDLSNALQNmFTsigncgsqgmngmneskiadLLNGSEYVPTYEDKDGDWM-LVGDVPWEMFVE------SCKR 224
           79******************************75588899**************99999***************.************......**** PP
   S: 79   lliqk 83
           l+i+k
   Q: 225  LRIMK 229
           ****8 PP

Organism

Oryza brachyantha

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAADLGFEAT ELRLGLPGGD GEAARSSSSG KRGFAETCID LKLKLEPAAT AVVDDEKEEA 60
AGEEDVDASP PASGGMKRSP SQSSVVTAAV QLPDPGKPRA PKAQVVGWPP VRSFRKNILG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG ACCTGGGCTT CGAGGCGACC GAGCTCCGGC TCGGCCTGCC CGGCGGCGAT 60
GGGGAGGCGG CGAGGAGCTC CTCCTCCGGG AAGAGGGGCT TCGCTGAGAC CTGCATCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

obr:102716180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	59.07	1.00e-72	265.00
IUUC-Apl-003220	Anas platyrhynchos	32.08	1.30e-01	29.60
IUUC-Aca-004830	Anolis carolinensis	32.08	8.50e-02	30.00
IUUC-Aly-006188	Arabidopsis lyrata	51.69	2.00e-57	214.00
IUUC-Ath-007356	Arabidopsis thaliana	53.36	3.00e-63	233.00
IUUC-Bdi-014859	Brachypodium distachyon	73.05	4.00e-84	303.00
IUUC-Bol-016371	Brassica oleracea	53.21	2.00e-62	231.00
IUUC-Bra-016936	Brassica rapa	52.29	2.00e-60	224.00
IUUC-Cja-019530	Callithrix jacchus	30.36	1.40e-01	30.00
IUUC-Cpo-021749	Cavia porcellus	30.36	1.20e-01	30.00
IUUC-Csa-023127	Chlorocebus sabaeus	30.36	7.80e-02	30.00
IUUC-Dno-029244	Dasypus novemcinctus	30.36	1.40e-01	30.00
IUUC-Dor-030191	Dipodomys ordii	30.36	1.00e-01	30.40
IUUC-Eeu-035270	Erinaceus europaeus	30.36	4.30e-02	31.60
IUUC-Fca-035804	Felis catus	30.36	1.40e-01	29.60
IUUC-Fal-037426	Ficedula albicollis	32.08	1.50e-01	29.60
IUUC-Gga-040715	Gallus gallus	32.08	1.40e-01	29.60
IUUC-Gma-043010	Glycine max	56.52	1.00e-67	248.00
IUUC-Hsa-045687	Homo sapiens	30.36	1.30e-01	30.00
IUUC-Hvu-047087	Hordeum vulgare	81.21	1.00e-67	247.00
IUUC-Itr-048521	Ictidomys tridecemlineatus	30.36	1.40e-01	30.00
IUUC-Mcc-054955	Macaca mulatta	30.36	1.40e-01	30.00
IUUC-Mtr-058641	Medicago truncatula	58.69	6.00e-70	256.00
IUUC-Mmr-061160	Microcebus murinus	30.36	6.90e-02	30.80
IUUC-Mdo-062388	Monodelphis domestica	30.36	1.30e-01	30.00
IUUC-Mmu-063730	Mus musculus	30.36	1.40e-01	29.60
IUUC-Mac-065450	Musa acuminata	61.92	2.00e-69	254.00
IUUC-Mlu-067270	Myotis lucifugus	30.36	6.80e-02	30.80
IUUC-Nle-069491	Nomascus leucogenys	30.36	1.30e-01	30.00
IUUC-Oba-075945	Oryza barthii	67.73	3.00e-79	287.00
IUUC-Ogu-078911	Oryza glumaepatula	68.66	1.00e-87	315.00
IUUC-Oin-079136	Oryza indica	65.36	5.00e-81	293.00
IUUC-Oni-082674	Oryza nivara	66.55	3.00e-78	283.00
IUUC-Osa-086164	Oryza sativa	65.36	5.00e-81	293.00
IUUC-Oga-088931	Otolemur garnettii	30.36	1.20e-01	30.00
IUUC-Ptr-091043	Pan troglodytes	30.36	1.30e-01	30.00
IUUC-Psi-093566	Pelodiscus sinensis	32.08	1.70e-01	29.60
IUUC-Pab-098182	Pongo abelii	30.36	1.30e-01	30.00
IUUC-Pop-099218	Populus trichocarpa	59.61	1.00e-67	248.00
IUUC-Ppe-101719	Prunus persica	58.33	5.00e-63	233.00
IUUC-Rno-105324	Rattus norvegicus	30.36	1.40e-01	30.00
IUUC-Sha-106837	Sarcophilus harrisii	30.36	1.40e-01	30.00
IUUC-Smo-109586	Selaginella moellendorffii	46.15	4.00e-33	134.00
IUUC-Sit-110063	Setaria italica	69.63	3.00e-85	306.00
IUUC-Sly-111769	Solanum lycopersicum	58.82	1.00e-69	254.00
IUUC-Stu-112038	Solanum tuberosum	57.65	1.00e-68	251.00
IUUC-Sbi-114725	Sorghum bicolor	66.67	1.00e-72	265.00
IUUC-Tgu-117454	Taeniopygia guttata	32.08	1.30e-01	30.00
IUUC-Tsy-119108	Tarsius syrichta	30.36	1.30e-01	30.00
IUUC-Tca-121261	Theobroma cacao	60.47	5.00e-71	259.00
IUUC-Tre-122196	Trichoderma reesei	34.62	3.90e-01	29.30
IUUC-Tae-124253	Triticum aestivum	72.59	1.00e-79	288.00
IUUC-Tur-126762	Triticum urartu	64.75	4.00e-76	276.00
IUUC-Vvi-131458	Vitis vinifera	60.16	8.00e-70	255.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence