iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121532

Ensembl Protein ID

EOY11069

UniProt Accession

A0A061F988; A0A061F988_THECC

Genbank Protein ID

EOY11069.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM001883

Gene Name

TCM_026343

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_026343	EOY11069	EOY11069

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.10e-16	60.3	133	230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           +vkvs++g+++++++dl+ + ++++L +a+ + +                         l++se+ ++YeD+dGD++ l++D++++++v+      s++rl
   Q: 133  FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKmFSsftigncgsqgmkdfmnesklidLLNGSEYVPTYEDKDGDWM-LVGDVPWEMFVD------SCKRL 226
           8*******************************6225669999***************99999***************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 227  RIMK 230
           ***8 PP

Organism

Theobroma cacao

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTSIMDAACD KYSMINFEET ELRLGLPGGN GNDGEMTKNN GKRGFSETVD LKLNLSTAKE 60
AVADEAEKVK KKSTVAPRSA DPAKPPAKAQ VVGWPPVRSF RKNIMAVQKN SSDVEGEKAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGGGAGAT ATTTTGGGAG AATGGAACGA GATTGAAGTT GGATCGATTC ACGAGTCTTT 60
TCACGTAAAT TTGGTGTTTA GTTTCTCATA ATGACTAGCA TTATGGACGC GGCGTGTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	66.80	7.00e-86	308.00
IUUC-Aly-006188	Arabidopsis lyrata	70.61	4.00e-80	289.00
IUUC-Ath-007356	Arabidopsis thaliana	71.43	1.00e-84	305.00
IUUC-Bol-016371	Brassica oleracea	72.92	7.00e-86	308.00
IUUC-Bra-016936	Brassica rapa	72.08	1.00e-84	304.00
IUUC-Gma-043010	Glycine max	69.35	1.00e-88	318.00
IUUC-Mtr-058641	Medicago truncatula	70.66	1.00e-92	331.00
IUUC-Oba-075945	Oryza barthii	75.42	2.00e-70	257.00
IUUC-Ogl-077429	Oryza glaberrima	54.65	2.00e-65	240.00
IUUC-Ogu-078911	Oryza glumaepatula	58.48	4.00e-76	276.00
IUUC-Oin-079136	Oryza indica	57.45	3.00e-70	257.00
IUUC-Olo-080519	Oryza longistaminata	55.13	3.00e-43	167.00
IUUC-Ome-081785	Oryza meridionalis	50.88	2.00e-47	181.00
IUUC-Oni-082674	Oryza nivara	74.86	3.00e-70	257.00
IUUC-Opu-083338	Oryza punctata	54.88	3.00e-48	184.00
IUUC-Oru-084731	Oryza rufipogon	55.09	9.00e-48	182.00
IUUC-Osa-086164	Oryza sativa	57.45	3.00e-70	257.00
IUUC-Ppa-095740	Physcomitrella patens	43.09	2.00e-34	139.00
IUUC-Pop-099218	Populus trichocarpa	83.27	3.00e-108	383.00
IUUC-Pyt-104489	Pyrenophora triticirepentis	33.33	2.40e+00	26.60
IUUC-Sit-110063	Setaria italica	65.52	1.00e-76	278.00
IUUC-Sly-111769	Solanum lycopersicum	73.26	2.00e-103	367.00
IUUC-Stu-112038	Solanum tuberosum	73.83	1.00e-102	365.00
IUUC-Sbi-114725	Sorghum bicolor	62.55	6.00e-72	263.00
IUUC-Tur-126762	Triticum urartu	56.47	1.00e-65	242.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence