iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pma-094733

Ensembl Protein ID

ENSPMAP00000003298.1

UniProt Accession

S4RDL6; S4RDL6_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000003030.1	ENSPMAT00000003313.1	ENSPMAP00000003298.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.40e-12	44.5	315	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vClvCg+g+e++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 315  VCLVCGRGDEED-KLLLCDGCDDSYHTFCLIPP-LQDVPKGD-WRCPKCVA 362
           8*********88.6*******************.*******7.******75 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

AAAAFDEFVA PPECPVFVPT WEEFSDPMGY IAKIRPSAEK TGICKIRPPP DWQPPFAVDV 60
DKFRFTPRIQ RLNELEAQTR VKLNFLDQIA KFWELQGSTL KIPIVERKIL DLYMLSKVVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCGGCGG CCTTCGATGA GTTCGTGGCG CCGCCGGAGT GCCCCGTGTT CGTGCCGACG 60
TGGGAGGAGT TCTCCGACCC CATGGGCTAC ATCGCCAAGA TTCGCCCGTC GGCCGAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0479--Metal-binding
KW-0539--Nucleus
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002595	Amborella trichopoda	34.99	2.00e-118	419.00
IUUC-Bra-017998	Brassica rapa	55.32	1.00e-12	68.90
IUUC-Cpo-021718	Cavia porcellus	69.55	0.00e+00	956.00
IUUC-Ete-033144	Echinops telfairi	50.36	1.00e-151	530.00
IUUC-Hvu-047583	Hordeum vulgare	40.51	2.00e-14	73.60
IUUC-Laf-054098	Loxodonta africana	67.31	0.00e+00	1055.00
IUUC-Mac-065069	Musa acuminata	35.96	2.00e-09	57.80
IUUC-Opr-071002	Ochotona princeps	61.50	0.00e+00	761.00
IUUC-Pva-102553	Pteropus vampyrus	66.45	0.00e+00	1037.00
IUUC-Pgr-103434	Puccinia graminis	38.60	6.00e-33	133.00
IUUC-Ptt-103851	Puccinia triticina	36.84	1.10e+00	25.80
IUUC-Smo-108687	Selaginella moellendorffii	56.25	2.00e-11	63.50
IUUC-Sre-115161	Sporisorium reilianum	33.29	1.00e-124	441.00
IUUC-Tsy-119237	Tarsius syrichta	60.27	0.00e+00	888.00
IUUC-Tbe-128040	Tupaia belangeri	77.49	0.00e+00	739.00
IUUC-Uma-129590	Ustilago maydis	33.69	2.00e-119	423.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence