iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049222

Ensembl Protein ID

CAY67984

UniProt Accession

C4QXL1; C4QXL1_KOMPG

Genbank Protein ID

CAY67984.1

Protein Name

Protein that recognizes and binds damaged DNA in an ATP-dependent manner (With Rad7p)

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-4_0154

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-4_0154	CAY67984	CAY67984

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	74.54	0.00e+00	1030.00	IUUC-Sce-106159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MTKASEAGGF IVDDPDYKKP ARRRRAAKKA VSYVETDDEL PPNGTSSSKS SRKRKVKDES 60
EDEEYQESLG TDKVDDIKPE DDEEEDAIVI RGTSTGRNRP NGASIVNAIS LSDLSDLSDL 120

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Nucleotide Sequence
(Fasta)

ATGACCAAAG CAAGCGAAGC AGGCGGATTC ATAGTGGACG ACCCAGACTA CAAGAAACCC 60
GCCAGGAGAA GAAGAGCTGC GAAGAAAGCT GTCTCCTACG TTGAGACGGA CGATGAGCTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0000113--C:nucleotide-excision repair factor 4 complex
GO:0005524--F:ATP binding
GO:0003684--F:damaged DNA binding
GO:0008094--F:DNA-dependent ATPase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0034613--P:cellular protein localization
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppa:PAS_chr1-4_0154

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000449	Aegilops tauschii	43.40	2.00e-119	421.00
IUUC-Atr-002602	Amborella trichopoda	44.15	2.00e-115	408.00
IUUC-Aly-005572	Arabidopsis lyrata	43.91	7.00e-122	429.00
IUUC-Ath-007571	Arabidopsis thaliana	44.78	4.00e-124	436.00
IUUC-Ago-007980	Ashbya gossypii	69.25	0.00e+00	952.00
IUUC-Acl-008061	Aspergillus clavatus	50.75	0.00e+00	680.00
IUUC-Afl-008389	Aspergillus flavus	51.19	0.00e+00	686.00
IUUC-Afu-008775	Aspergillus fumigatus	50.00	0.00e+00	655.00
IUUC-Ani-009475	Aspergillus nidulans	53.35	3.00e-113	400.00
IUUC-Ang-009813	Aspergillus niger	50.37	0.00e+00	688.00
IUUC-Aor-009994	Aspergillus oryzae	51.83	0.00e+00	681.00
IUUC-Ate-010405	Aspergillus terreus	51.61	0.00e+00	690.00
IUUC-Bgr-012279	Blumeria graminis	51.62	0.00e+00	671.00
IUUC-Bci-013844	Botrytis cinerea	53.26	0.00e+00	675.00
IUUC-Bdi-015009	Brachypodium distachyon	42.91	4.00e-119	420.00
IUUC-Bol-016388	Brassica oleracea	41.27	2.00e-133	468.00
IUUC-Bra-017729	Brassica rapa	39.47	6.00e-135	472.00
IUUC-Cho-024891	Choloepus hoffmanni	35.96	1.00e-56	213.00
IUUC-Cgl-026730	Colletotrichum gloeosporioides	50.78	0.00e+00	686.00
IUUC-Cne-026934	Cryptococcus neoformans	53.56	0.00e+00	637.00
IUUC-Dse-031540	Dothistroma septosporum	52.17	0.00e+00	687.00
IUUC-Dme-031815	Drosophila melanogaster	26.52	3.00e-44	171.00
IUUC-Eeu-034597	Erinaceus europaeus	31.65	5.00e-35	141.00
IUUC-Fal-037486	Ficedula albicollis	29.45	2.00e-66	245.00
IUUC-Fox-037709	Fusarium oxysporum	52.83	0.00e+00	689.00
IUUC-Fso-038218	Fusarium solani	52.77	0.00e+00	712.00
IUUC-Ggr-040094	Gaeumannomyces graminis	53.38	0.00e+00	686.00
IUUC-Gga-040472	Gallus gallus	29.34	2.00e-66	245.00
IUUC-Gma-042935	Glycine max	44.06	3.00e-122	430.00
IUUC-Hvu-047660	Hordeum vulgare	43.26	3.00e-119	419.00
IUUC-Lch-050617	Latimeria chalumnae	35.00	9.00e-82	296.00
IUUC-Lpe-050970	Leersia perrieri	39.10	4.00e-104	370.00
IUUC-Lma-053125	Leptosphaeria maculans	51.54	0.00e+00	697.00
IUUC-Meu-056270	Macropus eugenii	32.46	3.00e-72	264.00
IUUC-Mor-056942	Magnaporthe oryzae	53.75	0.00e+00	711.00
IUUC-Mpo-057611	Magnaporthe poae	53.54	0.00e+00	688.00
IUUC-Mtr-058123	Medicago truncatula	43.60	1.00e-114	405.00
IUUC-Mla-059170	Melampsora laricipopulina	55.62	0.00e+00	730.00
IUUC-Mga-059553	Meleagris gallopavo	28.04	7.00e-63	233.00
IUUC-Mvi-060400	Microbotryum violaceum	52.80	0.00e+00	723.00
IUUC-Mdo-062919	Monodelphis domestica	34.05	2.00e-73	268.00
IUUC-Mac-064548	Musa acuminata	35.00	6.00e-95	340.00
IUUC-Nfi-068347	Neosartorya fischeri	50.45	0.00e+00	687.00
IUUC-Ncr-068941	Neurospora crassa	53.47	0.00e+00	714.00
IUUC-Opr-070388	Ochotona princeps	41.05	2.00e-43	169.00
IUUC-Obr-076549	Oryza brachyantha	42.28	6.00e-118	416.00
IUUC-Ogl-077889	Oryza glaberrima	43.09	2.00e-119	420.00
IUUC-Ogu-078593	Oryza glumaepatula	41.67	2.00e-112	397.00
IUUC-Oin-080110	Oryza indica	39.24	4.00e-97	347.00
IUUC-Olo-080282	Oryza longistaminata	38.99	2.00e-102	364.00
IUUC-Ome-081180	Oryza meridionalis	40.16	3.00e-106	377.00
IUUC-Oni-082941	Oryza nivara	41.67	2.00e-112	397.00
IUUC-Opu-083720	Oryza punctata	35.03	2.00e-105	375.00
IUUC-Oru-085272	Oryza rufipogon	39.43	7.00e-101	359.00
IUUC-Osa-085537	Oryza sativa	43.09	1.00e-119	421.00
IUUC-Olu-087669	Ostreococcus lucimarinus	41.45	7.00e-111	393.00
IUUC-Pno-094792	Phaeosphaeria nodorum	50.92	0.00e+00	691.00
IUUC-Pop-099503	Populus trichocarpa	44.42	2.00e-124	437.00
IUUC-Ppe-102071	Prunus persica	43.43	6.00e-123	432.00
IUUC-Pva-102896	Pteropus vampyrus	33.53	4.00e-69	254.00
IUUC-Pgr-103403	Puccinia graminis	53.84	0.00e+00	716.00
IUUC-Ptt-103966	Puccinia triticina	52.10	0.00e+00	679.00
IUUC-Pte-104264	Pyrenophora teres	51.69	0.00e+00	700.00
IUUC-Pyt-104815	Pyrenophora triticirepentis	51.69	0.00e+00	701.00
IUUC-Sce-106159	Saccharomyces cerevisiae	74.73	0.00e+00	1029.00
IUUC-Sha-107221	Sarcophilus harrisii	34.40	1.00e-74	272.00
IUUC-Sja-107959	Schizosaccharomyces japonicus	56.43	0.00e+00	764.00
IUUC-Spo-108338	Schizosaccharomyces pombe	58.97	0.00e+00	799.00
IUUC-Ssl-108523	Sclerotinia sclerotiorum	53.42	0.00e+00	674.00
IUUC-Smo-109139	Selaginella moellendorffii	43.39	5.00e-136	475.00
IUUC-Sit-110565	Setaria italica	42.40	2.00e-118	417.00
IUUC-Sly-111735	Solanum lycopersicum	40.99	1.00e-136	478.00
IUUC-Stu-112856	Solanum tuberosum	44.09	6.00e-123	432.00
IUUC-Sbi-114800	Sorghum bicolor	42.35	9.00e-116	409.00
IUUC-Sre-114938	Sporisorium reilianum	56.81	0.00e+00	734.00
IUUC-Tca-121230	Theobroma cacao	45.09	3.00e-125	441.00
IUUC-Tre-122065	Trichoderma reesei	53.21	0.00e+00	713.00
IUUC-Tvi-122398	Trichoderma virens	52.77	0.00e+00	712.00
IUUC-Tae-125864	Triticum aestivum	43.26	2.00e-119	421.00
IUUC-Tur-126489	Triticum urartu	39.92	3.00e-96	343.00
IUUC-Tme-127214	Tuber melanosporum	29.15	5.00e-75	273.00
IUUC-Uma-129441	Ustilago maydis	56.90	0.00e+00	740.00
IUUC-Vda-129735	Verticillium dahliae	51.78	0.00e+00	711.00
IUUC-Vvi-131253	Vitis vinifera	44.18	8.00e-121	426.00
IUUC-Yli-134350	Yarrowia lipolytica	69.13	0.00e+00	953.00
IUUC-Zma-135113	Zea mays	43.11	4.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence