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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007363
Ensembl Protein ID AT2G47790.1
UniProt Accession Q944S2; O82247; Q944S2_ARATH
Genbank Protein ID AAC63654.2; AAL11563.1; AAN18140.1; AEC10888.1
Protein Name At2g47790/F17A22.18; Expressed protein; Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID AC005309; AF424569; BT000571; CP002685
Gene Name GIGANTUS 1; GTS1; At2g47790; F17A22.18
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G47790 AT2G47790.1 AT2G47790.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.10e-15 57.1 81 121
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvl 35
           gH+d v+ +af      s + l s+s Dgti+ WD+r++ +
   Q: 81   GHSDTVNQIAFssdsaaSPHVLHSCSSDGTIRSWDTRSFQQ 121
           8***********8877532679*************999865 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MEEVSSEMEV EVQNRQLSDS SPAQNVKKFG LKNSIQTNFG SDYVFQIVPK IDWTAIAVSL 60
STNTVKLYSP VTGQYYGECK GHSDTVNQIA FSSDSAASPH VLHSCSSDGT IRSWDTRSFQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007363|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAGTGCTAAT CCTCGTTTCG TTTTGATCAA CGAACAAACC CTAGACCGTT AAAACCCTTA 60
TCAATTTCGC TGAAACGGCA AATGGAAGAA GTGTCGTCGG AGATGGAAGT GGAGGTTCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007363|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0040008--P:regulation of growth
GO:0010029--P:regulation of seed germination
KEGG ath:AT2G47790
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000596 Aegilops tauschii 59.09 2.00e-130 458.00
IUUC-Aml-001254 Ailuropoda melanoleuca 27.93 2.00e-23 102.00
IUUC-Atr-003047 Amborella trichopoda 56.60 4.00e-105 374.00
IUUC-Apl-003479 Anas platyrhynchos 28.99 3.00e-27 115.00
IUUC-Aca-004537 Anolis carolinensis 27.83 1.00e-22 100.00
IUUC-Aly-006050 Arabidopsis lyrata 93.95 0.00e+00 704.00
IUUC-Ago-007711 Ashbya gossypii 27.63 7.00e-17 80.90
IUUC-Acl-008076 Aspergillus clavatus 25.68 1.00e-13 70.10
IUUC-Ani-009327 Aspergillus nidulans 28.78 4.00e-15 75.10
IUUC-Ang-009652 Aspergillus niger 27.78 4.00e-14 71.60
IUUC-Aor-009897 Aspergillus oryzae 34.15 1.00e-15 75.90
IUUC-Ate-010435 Aspergillus terreus 25.84 1.00e-12 66.20
IUUC-Ame-011078 Astyanax mexicanus 30.41 5.00e-22 97.80
IUUC-Bgr-012252 Blumeria graminis 28.10 9.00e-17 80.10
IUUC-Bta-012703 Bos taurus 26.32 2.00e-20 92.80
IUUC-Bdi-014266 Brachypodium distachyon 57.72 1.00e-115 409.00
IUUC-Bol-015632 Brassica oleracea 79.90 3.00e-88 316.00
IUUC-Bra-016730 Brassica rapa 81.79 1.00e-180 624.00
IUUC-Cja-019235 Callithrix jacchus 27.71 9.00e-23 100.00
IUUC-Cfa-020750 Canis familiaris 27.63 6.00e-22 97.80
IUUC-Cpo-021566 Cavia porcellus 28.18 6.00e-22 97.80
IUUC-Csa-023742 Chlorocebus sabaeus 28.40 7.00e-24 103.00
IUUC-Cho-024447 Choloepus hoffmanni 28.85 6.00e-19 87.80
IUUC-Cgl-026483 Colletotrichum gloeosporioides 28.84 1.00e-10 59.70
IUUC-Cne-026996 Cryptococcus neoformans 26.70 2.00e-08 53.10
IUUC-Dre-028760 Danio rerio 30.70 4.00e-23 101.00
IUUC-Dno-028909 Dasypus novemcinctus 27.16 2.00e-23 102.00
IUUC-Dor-030224 Dipodomys ordii 29.86 2.00e-19 89.00
IUUC-Dse-031410 Dothistroma septosporum 27.59 6.00e-15 74.30
IUUC-Eca-034117 Equus caballus 26.57 5.00e-23 101.00
IUUC-Eeu-035227 Erinaceus europaeus 27.60 7.00e-24 103.00
IUUC-Fca-036221 Felis catus 27.54 4.00e-22 98.20
IUUC-Fal-037285 Ficedula albicollis 27.71 5.00e-20 91.30
IUUC-Ggr-040120 Gaeumannomyces graminis 29.14 7.00e-11 60.50
IUUC-Gga-041255 Gallus gallus 30.65 2.00e-26 112.00
IUUC-Gma-044345 Glycine max 68.60 5.00e-151 526.00
IUUC-Ggo-045118 Gorilla gorilla 28.31 3.00e-25 108.00
IUUC-Hsa-046961 Homo sapiens 28.31 4.00e-25 108.00
IUUC-Hvu-047219 Hordeum vulgare 59.84 3.00e-132 464.00
IUUC-Itr-048310 Ictidomys tridecemlineatus 27.30 1.00e-25 109.00
IUUC-Kpa-049122 Komagataella pastoris 24.92 3.00e-14 72.00
IUUC-Lch-050390 Latimeria chalumnae 28.02 4.00e-19 88.60
IUUC-Loc-052076 Lepisosteus oculatus 30.00 7.00e-23 100.00
IUUC-Lma-053270 Leptosphaeria maculans 26.76 9.00e-16 77.40
IUUC-Laf-054241 Loxodonta africana 26.20 1.00e-23 103.00
IUUC-Mcc-055445 Macaca mulatta 28.44 3.00e-25 108.00
IUUC-Meu-056701 Macropus eugenii 33.48 3.00e-18 84.70
IUUC-Mor-056911 Magnaporthe oryzae 26.15 2.00e-11 62.80
IUUC-Mpo-057525 Magnaporthe poae 31.43 4.00e-12 65.10
IUUC-Mtr-058036 Medicago truncatula 69.38 3.00e-153 533.00
IUUC-Mla-058923 Melampsora laricipopulina 28.78 1.00e-16 80.10
IUUC-Mga-059779 Meleagris gallopavo 29.81 4.00e-25 108.00
IUUC-Mvi-060394 Microbotryum violaceum 28.16 3.00e-17 82.00
IUUC-Mmr-061573 Microcebus murinus 27.76 6.00e-24 104.00
IUUC-Mdo-062961 Monodelphis domestica 28.95 2.00e-27 116.00
IUUC-Mmu-063554 Mus musculus 29.54 5.00e-23 101.00
IUUC-Mac-064862 Musa acuminata 60.96 1.00e-131 462.00
IUUC-Mpu-066725 Mustela putorius furo 28.23 1.00e-22 100.00
IUUC-Mlu-067432 Myotis lucifugus 25.95 2.00e-22 99.40
IUUC-Nfi-068488 Neosartorya fischeri 28.42 3.00e-15 75.10
IUUC-Ncr-068709 Neurospora crassa 27.66 2.00e-11 62.80
IUUC-Nle-069614 Nomascus leucogenys 28.14 3.00e-24 105.00
IUUC-Opr-070604 Ochotona princeps 26.13 2.00e-21 95.90
IUUC-Ont-071684 Oreochromis niloticus 29.21 2.00e-22 99.40
IUUC-Oan-073074 Ornithorhynchus anatinus 30.15 8.00e-28 117.00
IUUC-Ocu-074393 Oryctolagus cuniculus 26.27 2.00e-21 96.30
IUUC-Oba-075342 Oryza barthii 60.60 3.00e-118 417.00
IUUC-Obr-076370 Oryza brachyantha 61.96 2.00e-126 444.00
IUUC-Ogl-077049 Oryza glaberrima 61.96 3.00e-122 431.00
IUUC-Ogu-078466 Oryza glumaepatula 60.87 2.00e-118 417.00
IUUC-Oin-080214 Oryza indica 55.16 2.00e-98 351.00
IUUC-Olo-080978 Oryza longistaminata 55.16 2.00e-98 351.00
IUUC-Ome-081321 Oryza meridionalis 59.78 7.00e-114 403.00
IUUC-Oni-082345 Oryza nivara 60.60 6.00e-118 416.00
IUUC-Opu-083337 Oryza punctata 60.87 3.00e-118 417.00
IUUC-Oru-085094 Oryza rufipogon 60.87 2.00e-118 417.00
IUUC-Osa-085382 Oryza sativa 64.74 3.00e-60 224.00
IUUC-Ola-087540 Oryzias latipes 29.57 2.00e-25 108.00
IUUC-Oga-088329 Otolemur garnettii 27.14 4.00e-20 91.70
IUUC-Oar-089413 Ovis aries 27.16 1.00e-19 90.10
IUUC-Ptr-090534 Pan troglodytes 28.31 6.00e-25 107.00
IUUC-Pan-092581 Papio anubis 28.70 2.00e-25 108.00
IUUC-Psi-093812 Pelodiscus sinensis 29.23 1.00e-28 120.00
IUUC-Ppa-095712 Physcomitrella patens 47.78 5.00e-96 343.00
IUUC-Pab-098114 Pongo abelii 27.41 5.00e-25 107.00
IUUC-Pop-099394 Populus trichocarpa 72.24 2.00e-153 534.00
IUUC-Pca-100968 Procavia capensis 26.65 6.00e-22 97.80
IUUC-Ppe-101385 Prunus persica 62.50 7.00e-119 419.00
IUUC-Pva-102164 Pteropus vampyrus 27.41 1.00e-21 97.10
IUUC-Pgr-103524 Puccinia graminis 27.70 9.00e-16 77.00
IUUC-Ptt-103863 Puccinia triticina 29.11 2.00e-12 65.10
IUUC-Rno-105066 Rattus norvegicus 27.54 2.00e-25 109.00
IUUC-Sce-106334 Saccharomyces cerevisiae 25.00 1.00e-14 73.60
IUUC-Sha-107540 Sarcophilus harrisii 29.12 1.00e-23 103.00
IUUC-Sja-107890 Schizosaccharomyces japonicus 27.20 4.00e-13 68.20
IUUC-Spo-108342 Schizosaccharomyces pombe 32.90 4.00e-11 61.60
IUUC-Smo-108767 Selaginella moellendorffii 47.25 5.00e-84 303.00
IUUC-Sit-110267 Setaria italica 58.55 2.00e-131 461.00
IUUC-Sly-111439 Solanum lycopersicum 64.67 4.00e-140 490.00
IUUC-Stu-112664 Solanum tuberosum 64.25 2.00e-139 487.00
IUUC-Sar-113388 Sorex araneus 26.19 3.00e-21 95.10
IUUC-Sbi-114679 Sorghum bicolor 60.99 2.00e-127 447.00
IUUC-Ssc-115311 Sus scrofa 25.75 3.00e-21 95.50
IUUC-Tgu-116672 Taeniopygia guttata 27.78 1.00e-19 90.10
IUUC-Tru-117689 Takifugu rubripes 30.36 3.00e-26 112.00
IUUC-Tsy-119627 Tarsius syrichta 26.35 2.00e-20 92.40
IUUC-Tni-120137 Tetraodon nigroviridis 29.73 2.00e-26 112.00
IUUC-Tca-120958 Theobroma cacao 70.90 7.00e-163 565.00
IUUC-Tre-122133 Trichoderma reesei 30.32 8.00e-13 67.00
IUUC-Tvi-122387 Trichoderma virens 27.78 2.00e-12 65.90
IUUC-Tae-125823 Triticum aestivum 59.09 1.00e-130 458.00
IUUC-Ttr-128539 Tursiops truncatus 26.87 2.00e-21 95.90
IUUC-Vpa-130315 Vicugna pacos 25.67 3.00e-19 88.60
IUUC-Vvi-131262 Vitis vinifera 68.15 3.00e-151 526.00
IUUC-Xtr-132190 Xenopus tropicalis 30.56 2.00e-26 112.00
IUUC-Yli-134492 Yarrowia lipolytica 27.08 5.00e-11 61.60
IUUC-Zma-135832 Zea mays 61.79 8.00e-128 449.00
Created Date 25-Jun-2017

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