iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pab-098014

Ensembl Protein ID

ENSPPYP00000003631.2

UniProt Accession

H2ND37; H2ND37_PONAB

Genbank Protein ID

ENSPPYP00000003631

Protein Name

Nuclear RNA export factor 1

Genbank Nucleotide ID

ABGA01352901

Gene Name

NXF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000003143.2	ENSPPYT00000003760.2	ENSPPYP00000003631.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	24.01	2.00e-07	52.40	IUUC-Sce-106429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pongo abelii

Protein Sequence
(Fasta)

MADEGKSYSE HDDERVNFPQ RKKKGRGPFR WKYGEGNRRS GRGGSGIRSS RLEEDDGDVA 60
MSDAQDGPRV RYNPYTTRPN RRGDAWHDRD RIHVTVRRDR APPERGGAGT SQDGTSKNWF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAAGAAAG CGAGGCATAG ACAAGGAGCC GAGCTGAAAC ACTGGCTAGA TTCCGGTAGG 60
GGTCTGAGCC ATCACTCCCA CCTGGAGGCG CGGTCTCCAT TCCTCTGAAG CCCTTTGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR002075--NTF2
IPR032710--NTF2-like_dom
IPR018222--Nuclear_transport_factor_2_euk
IPR012677--Nucleotide-bd_a/b_plait
IPR030217--NXF_fam
IPR000504--RRM_dom
IPR005637--TAP_C_dom
IPR015245--Tap_RNA-bd
IPR009060--UBA-like

PROSITE

PS51450--LRR
PS50177--NTF2_DOMAIN
PS51281--TAP_C

Pfam

PF02136--NTF2
PF09162--Tap-RNA_bind
PF03943--TAP_C

SMART

SM00804--TAP_C

Gene Ontology

GO:0005737--C:cytoplasm
GO:0042405--C:nuclear inclusion body
GO:0005643--C:nuclear pore
GO:0016607--C:nuclear speck
GO:0000346--C:transcription export complex
GO:0003729--F:mRNA binding
GO:0005487--F:nucleocytoplasmic transporter activity
GO:0000166--F:nucleotide binding
GO:0003727--F:single-stranded RNA binding
GO:0016973--P:poly(A)+ mRNA export from nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001516	Ailuropoda melanoleuca	91.26	0.00e+00	1057.00
IUUC-Apl-003526	Anas platyrhynchos	35.35	4.00e-03	34.70
IUUC-Aca-005187	Anolis carolinensis	63.80	0.00e+00	731.00
IUUC-Ath-006825	Arabidopsis thaliana	31.25	2.80e+00	26.60
IUUC-Ago-007780	Ashbya gossypii	22.92	1.00e-16	81.30
IUUC-Acl-008191	Aspergillus clavatus	24.41	4.00e-20	93.20
IUUC-Afl-008512	Aspergillus flavus	25.70	2.00e-23	103.00
IUUC-Afu-009048	Aspergillus fumigatus	25.54	3.00e-23	103.00
IUUC-Ani-009320	Aspergillus nidulans	22.31	1.00e-15	78.60
IUUC-Ang-009834	Aspergillus niger	23.92	8.00e-19	88.60
IUUC-Aor-010039	Aspergillus oryzae	25.22	1.00e-19	91.70
IUUC-Ate-010321	Aspergillus terreus	25.00	3.00e-18	87.00
IUUC-Ame-011034	Astyanax mexicanus	58.18	0.00e+00	637.00
IUUC-Bgr-012142	Blumeria graminis	24.68	2.00e-15	77.80
IUUC-Bta-013268	Bos taurus	90.98	0.00e+00	1032.00
IUUC-Bci-013951	Botrytis cinerea	25.75	3.00e-18	87.00
IUUC-Cja-019064	Callithrix jacchus	96.45	0.00e+00	1101.00
IUUC-Cfa-020712	Canis familiaris	91.35	0.00e+00	1014.00
IUUC-Cpo-021814	Cavia porcellus	93.86	0.00e+00	1076.00
IUUC-Csa-023652	Chlorocebus sabaeus	97.90	0.00e+00	1122.00
IUUC-Cho-024546	Choloepus hoffmanni	54.55	1.30e-02	33.10
IUUC-Cin-025669	Ciona intestinalis	34.13	2.00e-93	336.00
IUUC-Csv-025957	Ciona savignyi	34.86	4.00e-85	308.00
IUUC-Cgl-026395	Colletotrichum gloeosporioides	26.13	1.00e-24	108.00
IUUC-Cne-026967	Cryptococcus neoformans	22.06	7.00e-03	35.40
IUUC-Dre-028476	Danio rerio	53.20	5.00e-146	511.00
IUUC-Dno-029301	Dasypus novemcinctus	90.79	0.00e+00	1023.00
IUUC-Dor-030764	Dipodomys ordii	92.74	0.00e+00	1068.00
IUUC-Dse-031489	Dothistroma septosporum	24.10	9.00e-15	75.50
IUUC-Dme-031623	Drosophila melanogaster	31.14	4.00e-72	265.00
IUUC-Ete-032992	Echinops telfairi	78.19	0.00e+00	797.00
IUUC-Eca-033208	Equus caballus	93.02	0.00e+00	1004.00
IUUC-Eeu-034759	Erinaceus europaeus	91.28	0.00e+00	1053.00
IUUC-Fca-035671	Felis catus	93.21	0.00e+00	1065.00
IUUC-Fal-036625	Ficedula albicollis	35.35	6.00e-03	34.70
IUUC-Fox-037892	Fusarium oxysporum	27.97	2.00e-20	94.00
IUUC-Fso-038402	Fusarium solani	26.65	3.00e-19	90.10
IUUC-Gmo-039325	Gadus morhua	54.17	7.00e-145	507.00
IUUC-Ggr-039736	Gaeumannomyces graminis	24.07	2.00e-10	61.20
IUUC-Gga-040508	Gallus gallus	71.26	0.00e+00	774.00
IUUC-Gac-041798	Gasterosteus aculeatus	57.26	0.00e+00	682.00
IUUC-Ggo-044655	Gorilla gorilla	97.53	0.00e+00	1088.00
IUUC-Hsa-047028	Homo sapiens	98.06	0.00e+00	1122.00
IUUC-Itr-048415	Ictidomys tridecemlineatus	90.00	0.00e+00	1045.00
IUUC-Kpa-049280	Komagataella pastoris	22.93	1.00e-19	91.30
IUUC-Lch-049501	Latimeria chalumnae	69.43	0.00e+00	820.00
IUUC-Loc-052299	Lepisosteus oculatus	63.75	9.00e-170	589.00
IUUC-Laf-053523	Loxodonta africana	91.60	0.00e+00	1053.00
IUUC-Mcc-055389	Macaca mulatta	97.85	0.00e+00	1035.00
IUUC-Meu-056620	Macropus eugenii	55.84	2.00e-133	468.00
IUUC-Mor-057232	Magnaporthe oryzae	26.64	1.00e-25	111.00
IUUC-Mpo-057539	Magnaporthe poae	23.18	4.00e-09	56.60
IUUC-Mla-059053	Melampsora laricipopulina	25.83	1.00e-22	101.00
IUUC-Mga-059220	Meleagris gallopavo	35.35	4.00e-03	35.00
IUUC-Mvi-060283	Microbotryum violaceum	25.35	1.00e-18	88.20
IUUC-Mmr-061583	Microcebus murinus	95.48	0.00e+00	1092.00
IUUC-Mdo-062158	Monodelphis domestica	81.01	0.00e+00	944.00
IUUC-Mmu-064202	Mus musculus	89.66	0.00e+00	1002.00
IUUC-Mpu-065730	Mustela putorius furo	92.08	0.00e+00	1050.00
IUUC-Mlu-066975	Myotis lucifugus	89.35	0.00e+00	983.00
IUUC-Nfi-068368	Neosartorya fischeri	25.75	1.00e-22	101.00
IUUC-Ncr-068724	Neurospora crassa	24.79	1.00e-14	74.70
IUUC-Nle-069816	Nomascus leucogenys	97.74	0.00e+00	1113.00
IUUC-Opr-070244	Ochotona princeps	43.03	2.00e-124	439.00
IUUC-Ont-072608	Oreochromis niloticus	58.23	0.00e+00	704.00
IUUC-Oan-073580	Ornithorhynchus anatinus	33.33	2.00e-03	36.20
IUUC-Ocu-074226	Oryctolagus cuniculus	92.08	0.00e+00	1105.00
IUUC-Ola-087008	Oryzias latipes	64.21	0.00e+00	671.00
IUUC-Oga-088317	Otolemur garnettii	91.64	0.00e+00	996.00
IUUC-Oar-089720	Ovis aries	90.66	0.00e+00	1003.00
IUUC-Ptr-091148	Pan troglodytes	98.06	0.00e+00	1122.00
IUUC-Pan-091764	Papio anubis	97.90	0.00e+00	1119.00
IUUC-Psi-094071	Pelodiscus sinensis	64.44	0.00e+00	772.00
IUUC-Pno-095045	Phaeosphaeria nodorum	28.57	1.00e-03	37.70
IUUC-Pfo-096500	Poecilia formosa	59.62	0.00e+00	720.00
IUUC-Pca-100121	Procavia capensis	89.66	0.00e+00	994.00
IUUC-Pva-102865	Pteropus vampyrus	92.08	0.00e+00	1002.00
IUUC-Pgr-103333	Puccinia graminis	24.67	7.00e-15	75.90
IUUC-Ptt-103702	Puccinia triticina	24.40	9.00e-18	85.50
IUUC-Pte-104388	Pyrenophora teres	22.50	2.30e-02	32.70
IUUC-Rno-106100	Rattus norvegicus	90.63	0.00e+00	1020.00
IUUC-Sce-106429	Saccharomyces cerevisiae	21.73	3.00e-12	66.60
IUUC-Sha-106834	Sarcophilus harrisii	80.32	0.00e+00	952.00
IUUC-Sja-107818	Schizosaccharomyces japonicus	26.24	1.00e-18	88.60
IUUC-Spo-108301	Schizosaccharomyces pombe	26.56	3.00e-31	130.00
IUUC-Ssl-108512	Sclerotinia sclerotiorum	24.68	2.00e-18	87.40
IUUC-Sar-112963	Sorex araneus	45.03	7.00e-122	431.00
IUUC-Sre-114950	Sporisorium reilianum	22.68	8.00e-19	89.00
IUUC-Ssc-116010	Sus scrofa	91.30	0.00e+00	995.00
IUUC-Tgu-116603	Taeniopygia guttata	36.36	5.00e-03	35.00
IUUC-Tru-118148	Takifugu rubripes	58.52	0.00e+00	686.00
IUUC-Tsy-119506	Tarsius syrichta	40.62	5.00e-06	44.30
IUUC-Tre-121894	Trichoderma reesei	26.27	2.00e-25	110.00
IUUC-Tvi-122501	Trichoderma virens	27.69	8.00e-30	125.00
IUUC-Tme-127084	Tuber melanosporum	24.70	3.00e-24	107.00
IUUC-Tbe-127980	Tupaia belangeri	61.24	4.00e-84	304.00
IUUC-Ttr-128656	Tursiops truncatus	56.13	0.00e+00	661.00
IUUC-Uma-129530	Ustilago maydis	23.43	2.00e-24	107.00
IUUC-Vda-129709	Verticillium dahliae	25.72	5.00e-19	89.40
IUUC-Vpa-130739	Vicugna pacos	45.34	3.00e-100	358.00
IUUC-Xtr-132404	Xenopus tropicalis	59.94	0.00e+00	724.00
IUUC-Xma-133051	Xiphophorus maculatus	58.43	0.00e+00	692.00
IUUC-Yli-134681	Yarrowia lipolytica	24.36	8.00e-29	121.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence