iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058122

Ensembl Protein ID

KEH31842

UniProt Accession

A0A072UQ77; A0A072UQ77_MEDTR

Genbank Protein ID

KEH31842.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g105700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g105700	KEH31842	KEH31842

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-57	189.0	540	579
UBD/Beta-Prp	1.50e-106	357.4	445	669

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+ ++++++f   d  +v++s+D+ti++W +++g +lk+
   Q: 540  GHKRGIWSVEFspVDQCVVTASGDKTIRIWAISDGSCLKT 579
           8**********9655889*******************986 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           gh ++v a+ fs+++  ++v+gs+D+t+kvw+++          + k   ++ +h++++ s+++ p+++ + sGs+drt+ vw l+    +  +++gh++ 
   Q: 445  GHMGAVGAIAFSKRKRdFFVSGSNDHTLKVWSIDgllddvaapiNLKAKAVVAAHDKDINSVAIAPNDSLVCSGSQDRTACVWRLPDLVSVV-VFKGHKRG 544
           68899999999998767**************99999999999999999999*****************************************.******** PP
   S: 140  vncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsg 240
           +++v+++p ++++v++s D+t+r+W ++ g++l+t++g ht+sv    f   g+++vs++ dg vklw ++++ecv t+ +h+d v+ +++ +++e l++g
   Q: 545  IWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEG-HTSSVLRALFVTRGTQIVSCGADGLVKLWTVKSNECVATYDNHEDKVWALAVGRKTETLATG 644
           *************************************9.************************************************************** PP
   S: 241  ssDgsiriW.dlrsgdllktlqlhn 264
           +sD ++++W d++  d   ++ +++
   Q: 645  GSDAVVNLWlDSTAADKEEAFRKEE 669
           *************999999999877 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MESLRLKTNY RCVPALQQFY TGGPYVVSSD GSFIVCACSD SIKIVDSANA SIKSTLEGDS 60
EQVTALVLGP DDKLLFSASH SRQIRVWDLE TLKCVRSWKG HEGPVMCMAV DPSGGLLATG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAATAAAA ACCCAAACCA CCAACCAAAA CCCTGAAACC CAAACCCTAC TTCACCCTCA 60
ACTAATTTCG ATTCACAGAC ACAGTTGCGT TGAGCCCCAA TACCAAAATG GAGTCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0009880--P:embryonic pattern specification
GO:0006364--P:rRNA processing

KEGG

mtr:MTR_4g105700

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	58.16	0.00e+00	965.00
IUUC-Aml-002376	Ailuropoda melanoleuca	38.55	1.00e-158	552.00
IUUC-Atr-002486	Amborella trichopoda	61.87	0.00e+00	1122.00
IUUC-Apl-003519	Anas platyrhynchos	37.61	2.00e-141	496.00
IUUC-Aca-004363	Anolis carolinensis	34.66	3.00e-74	271.00
IUUC-Aly-006152	Arabidopsis lyrata	69.73	0.00e+00	1164.00
IUUC-Ath-006966	Arabidopsis thaliana	69.24	0.00e+00	1168.00
IUUC-Ago-007746	Ashbya gossypii	31.29	7.00e-106	377.00
IUUC-Acl-008009	Aspergillus clavatus	29.40	2.00e-108	386.00
IUUC-Afl-008681	Aspergillus flavus	29.15	4.00e-101	362.00
IUUC-Afu-008798	Aspergillus fumigatus	29.36	2.00e-99	356.00
IUUC-Ani-009278	Aspergillus nidulans	29.17	1.00e-114	407.00
IUUC-Ang-009640	Aspergillus niger	30.48	3.00e-117	416.00
IUUC-Aor-010160	Aspergillus oryzae	29.15	4.00e-101	362.00
IUUC-Ate-010320	Aspergillus terreus	30.64	6.00e-114	404.00
IUUC-Ame-010930	Astyanax mexicanus	39.51	4.00e-38	150.00
IUUC-Bgr-012054	Blumeria graminis	30.65	8.00e-104	371.00
IUUC-Bta-012611	Bos taurus	39.39	3.00e-154	538.00
IUUC-Bci-013797	Botrytis cinerea	29.66	8.00e-109	387.00
IUUC-Bdi-014384	Brachypodium distachyon	63.48	0.00e+00	1089.00
IUUC-Bol-015097	Brassica oleracea	67.29	0.00e+00	1151.00
IUUC-Bra-017798	Brassica rapa	67.49	0.00e+00	1154.00
IUUC-Cel-018664	Caenorhabditis elegans	27.68	9.00e-93	334.00
IUUC-Cja-019092	Callithrix jacchus	38.56	2.00e-159	555.00
IUUC-Cfa-021040	Canis familiaris	39.47	2.00e-162	565.00
IUUC-Cpo-022529	Cavia porcellus	39.17	2.00e-152	532.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	65.69	8.00e-54	201.00
IUUC-Csa-024205	Chlorocebus sabaeus	39.29	3.00e-161	561.00
IUUC-Cin-025560	Ciona intestinalis	34.98	3.00e-149	521.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.85	1.00e-109	390.00
IUUC-Cne-027082	Cryptococcus neoformans	29.68	1.00e-120	427.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.96	2.00e-38	154.00
IUUC-Dre-028138	Danio rerio	37.50	2.00e-154	539.00
IUUC-Dno-029914	Dasypus novemcinctus	36.94	1.00e-109	390.00
IUUC-Dor-030685	Dipodomys ordii	40.98	2.00e-100	359.00
IUUC-Dse-031429	Dothistroma septosporum	29.66	6.00e-114	404.00
IUUC-Dme-031995	Drosophila melanogaster	29.12	8.00e-92	330.00
IUUC-Ete-033086	Echinops telfairi	42.93	2.00e-96	346.00
IUUC-Eca-034354	Equus caballus	39.02	2.00e-153	535.00
IUUC-Eeu-034832	Erinaceus europaeus	40.95	1.00e-94	340.00
IUUC-Fca-036136	Felis catus	34.63	1.00e-117	417.00
IUUC-Fal-036859	Ficedula albicollis	39.23	8.00e-168	583.00
IUUC-Fox-037863	Fusarium oxysporum	28.94	2.00e-96	346.00
IUUC-Fso-038389	Fusarium solani	28.40	1.00e-105	377.00
IUUC-Gmo-038711	Gadus morhua	34.87	7.00e-142	497.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.50	2.00e-99	356.00
IUUC-Gga-040263	Gallus gallus	37.65	1.00e-163	569.00
IUUC-Gac-041291	Gasterosteus aculeatus	37.25	2.00e-167	582.00
IUUC-Gma-044026	Glycine max	83.70	0.00e+00	1547.00
IUUC-Ggo-044693	Gorilla gorilla	39.03	3.00e-160	558.00
IUUC-Hsa-046048	Homo sapiens	38.91	9.00e-160	556.00
IUUC-Hvu-047608	Hordeum vulgare	63.29	0.00e+00	1073.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	39.21	3.00e-167	581.00
IUUC-Kpa-049209	Komagataella pastoris	32.33	4.00e-118	418.00
IUUC-Lch-050085	Latimeria chalumnae	37.79	7.00e-153	533.00
IUUC-Lpe-050945	Leersia perrieri	62.45	0.00e+00	1053.00
IUUC-Loc-052679	Lepisosteus oculatus	39.27	0.00e+00	630.00
IUUC-Laf-053685	Loxodonta africana	38.16	7.00e-147	513.00
IUUC-Mcc-055861	Macaca mulatta	39.29	3.00e-159	555.00
IUUC-Meu-056820	Macropus eugenii	35.14	3.00e-115	408.00
IUUC-Mor-057234	Magnaporthe oryzae	29.12	3.00e-97	349.00
IUUC-Mpo-057456	Magnaporthe poae	29.21	3.00e-77	282.00
IUUC-Mla-058980	Melampsora laricipopulina	27.95	4.00e-84	305.00
IUUC-Mga-060080	Meleagris gallopavo	37.32	1.00e-160	559.00
IUUC-Mvi-060338	Microbotryum violaceum	35.44	1.00e-153	536.00
IUUC-Mmr-060762	Microcebus murinus	38.80	2.00e-155	542.00
IUUC-Mdo-061975	Monodelphis domestica	38.87	2.00e-159	555.00
IUUC-Mmu-064038	Mus musculus	38.80	1.00e-155	542.00
IUUC-Mac-065189	Musa acuminata	62.27	0.00e+00	1133.00
IUUC-Mpu-066526	Mustela putorius furo	39.26	3.00e-155	541.00
IUUC-Mlu-067716	Myotis lucifugus	38.56	4.00e-168	584.00
IUUC-Nfi-068474	Neosartorya fischeri	29.57	1.00e-103	370.00
IUUC-Ncr-068826	Neurospora crassa	27.19	2.00e-98	353.00
IUUC-Nle-069832	Nomascus leucogenys	38.45	6.00e-162	563.00
IUUC-Opr-071183	Ochotona princeps	37.80	7.00e-150	523.00
IUUC-Ont-072371	Oreochromis niloticus	38.30	1.00e-168	586.00
IUUC-Oan-073491	Ornithorhynchus anatinus	36.91	8.00e-129	453.00
IUUC-Ocu-074894	Oryctolagus cuniculus	32.97	1.00e-29	124.00
IUUC-Oba-075963	Oryza barthii	62.68	0.00e+00	1079.00
IUUC-Obr-076173	Oryza brachyantha	63.51	0.00e+00	1072.00
IUUC-Ogl-077692	Oryza glaberrima	62.56	0.00e+00	1076.00
IUUC-Ogu-078965	Oryza glumaepatula	62.56	0.00e+00	1078.00
IUUC-Oin-079708	Oryza indica	62.44	0.00e+00	1075.00
IUUC-Olo-080679	Oryza longistaminata	62.80	0.00e+00	1074.00
IUUC-Oni-082960	Oryza nivara	62.32	0.00e+00	1074.00
IUUC-Opu-083282	Oryza punctata	61.63	0.00e+00	1042.00
IUUC-Oru-085224	Oryza rufipogon	62.44	0.00e+00	1075.00
IUUC-Osa-085320	Oryza sativa	62.44	0.00e+00	1075.00
IUUC-Ola-086370	Oryzias latipes	32.95	9.00e-75	274.00
IUUC-Olu-087814	Ostreococcus lucimarinus	34.99	7.00e-129	454.00
IUUC-Oga-088458	Otolemur garnettii	38.24	8.00e-165	573.00
IUUC-Oar-090032	Ovis aries	36.72	1.00e-111	396.00
IUUC-Ptr-090749	Pan troglodytes	39.15	4.00e-160	558.00
IUUC-Pan-091691	Papio anubis	37.70	1.00e-148	520.00
IUUC-Psi-093200	Pelodiscus sinensis	38.09	2.00e-164	572.00
IUUC-Pma-094165	Petromyzon marinus	36.40	1.00e-110	393.00
IUUC-Pno-095048	Phaeosphaeria nodorum	32.68	5.00e-97	348.00
IUUC-Ppa-095336	Physcomitrella patens	52.56	0.00e+00	903.00
IUUC-Pfo-096132	Poecilia formosa	39.20	1.00e-166	579.00
IUUC-Pab-097855	Pongo abelii	39.17	2.00e-162	565.00
IUUC-Pop-099434	Populus trichocarpa	68.25	0.00e+00	1164.00
IUUC-Pca-100232	Procavia capensis	51.23	4.00e-55	209.00
IUUC-Ppe-101665	Prunus persica	70.83	0.00e+00	1226.00
IUUC-Pva-102178	Pteropus vampyrus	39.02	2.00e-159	555.00
IUUC-Pgr-103288	Puccinia graminis	27.73	7.00e-85	308.00
IUUC-Ptt-103808	Puccinia triticina	29.33	2.00e-77	283.00
IUUC-Pte-104205	Pyrenophora teres	32.35	6.00e-115	407.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	31.69	3.00e-104	372.00
IUUC-Rno-105617	Rattus norvegicus	39.02	1.00e-155	543.00
IUUC-Sce-106281	Saccharomyces cerevisiae	31.30	7.00e-109	387.00
IUUC-Sha-107378	Sarcophilus harrisii	39.10	5.00e-157	547.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.76	1.00e-120	426.00
IUUC-Spo-108361	Schizosaccharomyces pombe	32.93	7.00e-118	417.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.25	1.00e-114	406.00
IUUC-Smo-109257	Selaginella moellendorffii	53.34	0.00e+00	892.00
IUUC-Sit-110258	Setaria italica	62.75	0.00e+00	1100.00
IUUC-Sly-111521	Solanum lycopersicum	67.70	0.00e+00	1162.00
IUUC-Stu-112718	Solanum tuberosum	75.91	2.00e-56	209.00
IUUC-Sar-113586	Sorex araneus	34.02	6.00e-18	85.10
IUUC-Sbi-114768	Sorghum bicolor	62.07	0.00e+00	1092.00
IUUC-Sre-115159	Sporisorium reilianum	34.20	6.00e-105	375.00
IUUC-Ssc-116342	Sus scrofa	29.93	3.00e-74	272.00
IUUC-Tgu-117320	Taeniopygia guttata	37.70	2.00e-152	532.00
IUUC-Tru-118024	Takifugu rubripes	38.08	3.00e-161	561.00
IUUC-Tsy-118983	Tarsius syrichta	33.33	2.00e-29	122.00
IUUC-Tni-119971	Tetraodon nigroviridis	37.83	1.00e-161	563.00
IUUC-Tca-121248	Theobroma cacao	74.76	0.00e+00	1204.00
IUUC-Tre-122079	Trichoderma reesei	28.69	2.00e-103	369.00
IUUC-Tvi-122554	Trichoderma virens	28.82	7.00e-105	374.00
IUUC-Tae-123690	Triticum aestivum	63.13	0.00e+00	1084.00
IUUC-Tur-126436	Triticum urartu	59.32	0.00e+00	871.00
IUUC-Tme-126942	Tuber melanosporum	33.37	1.00e-117	417.00
IUUC-Tbe-127418	Tupaia belangeri	32.97	1.00e-29	124.00
IUUC-Ttr-128964	Tursiops truncatus	38.16	9.00e-157	546.00
IUUC-Uma-129473	Ustilago maydis	31.90	2.00e-110	393.00
IUUC-Vda-129749	Verticillium dahliae	29.36	4.00e-95	342.00
IUUC-Vpa-130668	Vicugna pacos	32.97	1.00e-29	124.00
IUUC-Vvi-131511	Vitis vinifera	73.62	0.00e+00	1259.00
IUUC-Xtr-132816	Xenopus tropicalis	34.42	6.00e-137	481.00
IUUC-Xma-133672	Xiphophorus maculatus	38.93	5.00e-170	590.00
IUUC-Yli-134602	Yarrowia lipolytica	34.15	1.00e-138	486.00
IUUC-Zma-135559	Zea mays	60.00	0.00e+00	1065.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence