iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Rno-104976

UUCD1 version

UUC-RaN-00332

Ensembl Protein ID

ENSRNOP00000013124.4

UniProt Accession

A0A0G2QC40; A0A0G2QC40_RAT

Genbank Protein ID

EDM15385.1

Protein Name

Makorin ring finger protein 1; RCG28025, isoform CRA_a

Genbank Nucleotide ID

AC125869

Gene Name

Mkrn1; rCG_28025

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000009280.5	ENSRNOT00000013124.5	ENSRNOP00000013124.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	94.47	0.00e+00	739.00	IUUC-Hsa-046589

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAEAAAPGTT ATTSGAGAAA AAVAAASLTS IPTVAAPSPG AGGGGGGSDG SGGGWTKQVT 60
CRYFMHGVCK EGDNCRYSHD LSDSPYGVVC KYFQRGYCVY GDRCRYEHSK PLKQEEVTAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGAGACGCG GTGACACGGC ACGGGACTGG CGTGGAGCTC TCGGGCTCTT CAGCCTCCCT 60
CCCCTCCCCT CCCTTCGCTG TCTTCTCCTT CTTAGCCGGA CCGGAACTAT GTGATCCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR026290--Makorin-1
IPR031644--MKRN1_C
IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF15815--MKRN1_C
PF00097--zf-C3HC4
PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000209--P:protein polyubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000297	Aegilops tauschii	40.78	2.00e-42	166.00
IUUC-Aml-001937	Ailuropoda melanoleuca	94.30	0.00e+00	674.00
IUUC-Atr-003024	Amborella trichopoda	36.44	1.00e-64	240.00
IUUC-Apl-004110	Anas platyrhynchos	77.46	4.00e-159	554.00
IUUC-Aca-005385	Anolis carolinensis	81.70	1.00e-178	619.00
IUUC-Aly-006124	Arabidopsis lyrata	32.49	1.00e-54	206.00
IUUC-Ath-006918	Arabidopsis thaliana	40.10	2.00e-42	166.00
IUUC-Acl-008358	Aspergillus clavatus	43.14	2.00e-05	44.30
IUUC-Afl-008652	Aspergillus flavus	36.36	1.00e-05	45.40
IUUC-Afu-008968	Aspergillus fumigatus	43.14	1.00e-05	45.40
IUUC-Ang-009527	Aspergillus niger	41.18	3.00e-05	43.90
IUUC-Aor-010090	Aspergillus oryzae	36.36	1.00e-05	45.40
IUUC-Ate-010565	Aspergillus terreus	41.18	4.00e-05	43.50
IUUC-Ame-011246	Astyanax mexicanus	65.49	7.00e-135	473.00
IUUC-Bta-012318	Bos taurus	92.20	0.00e+00	692.00
IUUC-Bdi-015008	Brachypodium distachyon	33.62	2.00e-54	206.00
IUUC-Bol-015689	Brassica oleracea	41.09	5.00e-43	167.00
IUUC-Bra-017861	Brassica rapa	41.09	5.00e-43	167.00
IUUC-Cel-018642	Caenorhabditis elegans	35.34	1.00e-54	207.00
IUUC-Cja-019550	Callithrix jacchus	93.12	6.00e-180	623.00
IUUC-Cfa-020166	Canis familiaris	93.46	0.00e+00	696.00
IUUC-Cpo-021887	Cavia porcellus	91.51	0.00e+00	717.00
IUUC-Cre-022707	Chlamydomonas reinhardtii	37.56	4.00e-35	141.00
IUUC-Csa-023930	Chlorocebus sabaeus	94.50	0.00e+00	728.00
IUUC-Cho-024307	Choloepus hoffmanni	93.69	0.00e+00	711.00
IUUC-Cin-025619	Ciona intestinalis	44.91	3.00e-99	355.00
IUUC-Csv-026322	Ciona savignyi	46.03	1.00e-94	339.00
IUUC-Cgl-026652	Colletotrichum gloeosporioides	41.18	3.00e-05	43.90
IUUC-Dre-027762	Danio rerio	67.21	3.00e-143	501.00
IUUC-Dno-029666	Dasypus novemcinctus	91.86	0.00e+00	705.00
IUUC-Dor-030133	Dipodomys ordii	94.20	9.00e-101	360.00
IUUC-Dme-031705	Drosophila melanogaster	35.97	4.00e-60	225.00
IUUC-Ete-032356	Echinops telfairi	77.61	8.00e-113	399.00
IUUC-Eca-033340	Equus caballus	94.77	0.00e+00	716.00
IUUC-Eeu-035167	Erinaceus europaeus	89.12	1.00e-164	572.00
IUUC-Fca-035536	Felis catus	92.40	0.00e+00	699.00
IUUC-Fal-036881	Ficedula albicollis	80.15	1.00e-170	592.00
IUUC-Gmo-039495	Gadus morhua	75.43	1.00e-103	369.00
IUUC-Ggr-039835	Gaeumannomyces graminis	42.86	1.00e-08	55.10
IUUC-Gga-041148	Gallus gallus	79.19	2.00e-162	565.00
IUUC-Gac-041790	Gasterosteus aculeatus	66.59	3.00e-146	511.00
IUUC-Ggo-045245	Gorilla gorilla	94.25	0.00e+00	753.00
IUUC-Hsa-046589	Homo sapiens	94.63	0.00e+00	733.00
IUUC-Hvu-047044	Hordeum vulgare	37.00	6.00e-50	191.00
IUUC-Itr-048468	Ictidomys tridecemlineatus	83.63	5.00e-108	384.00
IUUC-Lch-049777	Latimeria chalumnae	71.51	4.00e-143	500.00
IUUC-Loc-052281	Lepisosteus oculatus	70.14	4.00e-166	577.00
IUUC-Laf-054551	Loxodonta africana	90.89	0.00e+00	676.00
IUUC-Mcc-055160	Macaca mulatta	93.46	0.00e+00	696.00
IUUC-Meu-056809	Macropus eugenii	86.60	0.00e+00	644.00
IUUC-Mla-059005	Melampsora laricipopulina	27.05	7.00e-20	92.00
IUUC-Mga-059767	Meleagris gallopavo	80.15	1.00e-162	565.00
IUUC-Mmr-061574	Microcebus murinus	94.07	0.00e+00	700.00
IUUC-Mdo-061974	Monodelphis domestica	86.86	0.00e+00	656.00
IUUC-Mmu-063887	Mus musculus	98.00	0.00e+00	751.00
IUUC-Mac-064993	Musa acuminata	34.08	2.00e-60	226.00
IUUC-Mpu-066756	Mustela putorius furo	91.63	0.00e+00	647.00
IUUC-Mlu-067691	Myotis lucifugus	90.54	0.00e+00	687.00
IUUC-Nle-069845	Nomascus leucogenys	93.93	0.00e+00	728.00
IUUC-Opr-070262	Ochotona princeps	88.63	0.00e+00	678.00
IUUC-Ont-071561	Oreochromis niloticus	66.44	6.00e-162	563.00
IUUC-Oan-073517	Ornithorhynchus anatinus	43.37	7.00e-50	190.00
IUUC-Ocu-074869	Oryctolagus cuniculus	82.86	1.00e-164	572.00
IUUC-Ola-086506	Oryzias latipes	65.13	1.00e-151	529.00
IUUC-Olu-087870	Ostreococcus lucimarinus	43.22	2.00e-27	115.00
IUUC-Oga-088871	Otolemur garnettii	94.16	0.00e+00	744.00
IUUC-Oar-090436	Ovis aries	90.16	0.00e+00	659.00
IUUC-Ptr-091519	Pan troglodytes	94.39	0.00e+00	733.00
IUUC-Pan-092582	Papio anubis	93.29	0.00e+00	724.00
IUUC-Psi-093168	Pelodiscus sinensis	83.54	2.00e-178	618.00
IUUC-Pfo-096075	Poecilia formosa	66.74	4.00e-162	564.00
IUUC-Pab-098764	Pongo abelii	93.78	0.00e+00	722.00
IUUC-Pop-099909	Populus trichocarpa	35.36	4.00e-62	231.00
IUUC-Pca-100903	Procavia capensis	83.57	0.00e+00	674.00
IUUC-Ppe-101248	Prunus persica	42.56	8.00e-44	171.00
IUUC-Pva-103124	Pteropus vampyrus	81.78	2.00e-162	565.00
IUUC-Sha-107572	Sarcophilus harrisii	86.88	7.00e-176	610.00
IUUC-Smo-109483	Selaginella moellendorffii	41.18	1.00e-47	183.00
IUUC-Sit-110077	Setaria italica	33.81	7.00e-57	214.00
IUUC-Sar-113068	Sorex araneus	87.14	0.00e+00	665.00
IUUC-Sbi-114884	Sorghum bicolor	35.33	1.00e-58	220.00
IUUC-Ssc-115272	Sus scrofa	92.99	0.00e+00	699.00
IUUC-Tgu-116537	Taeniopygia guttata	80.24	2.00e-172	598.00
IUUC-Tru-118205	Takifugu rubripes	65.10	1.00e-151	529.00
IUUC-Tsy-118929	Tarsius syrichta	96.00	5.00e-147	513.00
IUUC-Tni-120744	Tetraodon nigroviridis	60.36	8.00e-140	489.00
IUUC-Tca-121675	Theobroma cacao	33.42	6.00e-57	214.00
IUUC-Tur-126806	Triticum urartu	33.93	6.00e-46	178.00
IUUC-Tme-127048	Tuber melanosporum	26.92	5.00e-17	82.00
IUUC-Tbe-128131	Tupaia belangeri	89.16	2.00e-149	521.00
IUUC-Ttr-129099	Tursiops truncatus	94.16	0.00e+00	719.00
IUUC-Vpa-130663	Vicugna pacos	87.27	1.00e-151	529.00
IUUC-Xtr-132036	Xenopus tropicalis	87.39	1.00e-104	373.00
IUUC-Xma-134162	Xiphophorus maculatus	66.51	3.00e-161	561.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence