iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114646

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G182300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g024030	Sb03g024030.1	Sb03g024030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.7	233	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+ +w       + + +CP Cr
   Q: 233  CPICLEEFhvGNEVRGLPCAHNFHVECIDQW------LRLNVKCPRCR 274
           ********99666******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPMRGVDFKW YDGFFLSMLA TSVIIVSINW KRYRLCAHPL HIWIVVDYTT VFIFRLLMFL 60
DNGLAAGMGL DLGWQQRYAR FCGRIVVLSV LVLLLYPFLW VWTVIGTLWF STARGCLPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGATGC GTGGCGTCGA TTTCAAGTGG TACGTCTGCC GACTCTAGTC TCGCCGCTTC 60
TTCCCTAATT TGTTCCCTCT TTGATTTGAA GAAAGAAGAT CCCTTTTTCT ATAATGAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010182--P:sugar mediated signaling pathway

KEGG

sbi:SORBI_03g024030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	90.73	6.00e-167	580.00
IUUC-Atr-002648	Amborella trichopoda	72.34	1.00e-150	524.00
IUUC-Aly-006490	Arabidopsis lyrata	72.96	1.00e-146	511.00
IUUC-Ath-007655	Arabidopsis thaliana	72.96	2.00e-147	514.00
IUUC-Acl-008363	Aspergillus clavatus	42.86	7.00e-13	67.80
IUUC-Bdi-014759	Brachypodium distachyon	87.50	7.00e-159	552.00
IUUC-Bol-015136	Brassica oleracea	71.94	2.00e-145	507.00
IUUC-Bra-018024	Brassica rapa	70.36	5.00e-136	476.00
IUUC-Gma-042879	Glycine max	82.11	1.00e-158	551.00
IUUC-Hvu-047589	Hordeum vulgare	93.88	2.00e-75	273.00
IUUC-Lpe-051403	Leersia perrieri	73.48	7.00e-128	448.00
IUUC-Mtr-058746	Medicago truncatula	81.52	1.00e-160	558.00
IUUC-Mac-064833	Musa acuminata	83.62	1.00e-164	572.00
IUUC-Oba-075099	Oryza barthii	86.12	0.00e+00	626.00
IUUC-Obr-076541	Oryza brachyantha	87.40	0.00e+00	637.00
IUUC-Ogl-077544	Oryza glaberrima	86.89	0.00e+00	627.00
IUUC-Ogu-078123	Oryza glumaepatula	81.75	2.00e-164	570.00
IUUC-Oin-079313	Oryza indica	86.47	5.00e-174	602.00
IUUC-Olo-080383	Oryza longistaminata	63.20	6.00e-117	413.00
IUUC-Ome-081106	Oryza meridionalis	74.86	8.00e-141	492.00
IUUC-Oni-082730	Oryza nivara	86.30	0.00e+00	639.00
IUUC-Opu-083224	Oryza punctata	84.36	5.00e-180	622.00
IUUC-Oru-085150	Oryza rufipogon	85.13	5.00e-150	523.00
IUUC-Osa-086306	Oryza sativa	86.56	8.00e-180	622.00
IUUC-Ppa-095217	Physcomitrella patens	49.83	9.00e-77	279.00
IUUC-Pop-099421	Populus trichocarpa	75.75	4.00e-146	509.00
IUUC-Ppe-101399	Prunus persica	78.79	2.00e-130	457.00
IUUC-Smo-109501	Selaginella moellendorffii	66.90	1.00e-112	398.00
IUUC-Sit-109685	Setaria italica	97.33	0.00e+00	706.00
IUUC-Sly-111730	Solanum lycopersicum	78.15	9.00e-159	551.00
IUUC-Stu-112358	Solanum tuberosum	76.02	8.00e-156	542.00
IUUC-Tca-121643	Theobroma cacao	76.17	2.00e-162	563.00
IUUC-Tae-124899	Triticum aestivum	89.71	2.00e-172	597.00
IUUC-Tur-126639	Triticum urartu	93.90	5.00e-135	473.00
IUUC-Vvi-131627	Vitis vinifera	71.61	1.00e-150	525.00
IUUC-Zma-135793	Zea mays	97.59	0.00e+00	679.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence