iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131270

UUCD1 version

UUC-ViV-00152

Ensembl Protein ID

VIT_05s0020g02860.t01

UniProt Accession

D7T6T1; D7T6T1_VITVI

Genbank Protein ID

CBI26202.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595749

Gene Name

RHF1A; VIT_05s0020g02860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_05s0020g02860	VIT_05s0020g02860.t01	VIT_05s0020g02860.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	31.7	29	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle+f  +d+  +++C H +h++C+  w      s+++  CP+C
   Q: 29   CSICLEPFstDDPATITNCRHEYHLQCILEW------SQRSKECPIC 69
           ********99888889***************......********** PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MADLTSSENP IFLSEFSAGA ADDASEDSCS ICLEPFSTDD PATITNCRHE YHLQCILEWS 60
QRSKECPICW QFLVLQDPTS QELLAAVEGE RSPRSRNSSP TESTFLHHFQ GDFGYDHDAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTCCGT GCGTTCTCTC TTTTCCTCTT CTTCCCATAA TTCCTTACTT TGACCCATTA 60
CTCTCTCCCC CCTCTCTCTT TGTGCCTTTC CTCTTTCATC TTCTTATTCT CTCCCCAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016020--C:membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0009561--P:megagametogenesis
GO:0055046--P:microgametogenesis
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0051726--P:regulation of cell cycle

KEGG

vvi:100240814

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002655	Amborella trichopoda	43.58	2.00e-54	205.00
IUUC-Aly-005899	Arabidopsis lyrata	45.45	3.00e-29	121.00
IUUC-Ath-007279	Arabidopsis thaliana	71.05	6.00e-33	134.00
IUUC-Afu-008835	Aspergillus fumigatus	31.88	2.00e-08	53.10
IUUC-Bol-015999	Brassica oleracea	73.85	5.00e-29	120.00
IUUC-Bra-017518	Brassica rapa	77.97	3.00e-27	114.00
IUUC-Gmo-039560	Gadus morhua	45.45	2.00e-09	54.70
IUUC-Gma-042977	Glycine max	47.83	2.00e-74	271.00
IUUC-Mtr-058591	Medicago truncatula	49.02	2.00e-35	142.00
IUUC-Ppa-095857	Physcomitrella patens	36.25	6.00e-40	157.00
IUUC-Pop-099767	Populus trichocarpa	59.15	3.00e-105	374.00
IUUC-Ppe-101316	Prunus persica	58.12	1.00e-91	328.00
IUUC-Smo-109592	Selaginella moellendorffii	63.83	2.00e-31	126.00
IUUC-Sit-110350	Setaria italica	50.88	5.00e-31	127.00
IUUC-Stu-112642	Solanum tuberosum	50.65	2.00e-35	141.00
IUUC-Sbi-113905	Sorghum bicolor	38.91	2.00e-50	191.00
IUUC-Tca-121560	Theobroma cacao	64.50	2.00e-43	169.00
IUUC-Tur-126169	Triticum urartu	34.51	3.00e-44	171.00
IUUC-Yli-134652	Yarrowia lipolytica	46.51	6.00e-08	51.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence