iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007344

UUCD1 version

UUC-ArT-01477

Ensembl Protein ID

AT1G71980.1

UniProt Accession

Q8VZ14; Q9C8W4; Q9M621; RMR2_ARATH

Genbank Protein ID

AAG52220.1; AEE35260.1; AAL38826.1; AAM91777.1; AAF32326.1

Protein Name

Receptor homology region, transmembrane domain- and RING domain-containing protein 2; ReMembR-H2 protein JR702

Genbank Nucleotide ID

AC021665; CP002684; AY065385; AY133843; AF218808

Gene Name

RMR2; JR702; At1g71980; F17M19.13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G71980	AT1G71980.1	AT1G71980.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.00e-06	30.0	232	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCled+   ++ +++lpC H fha C+  w     ++s +  CP+C+
   Q: 232  CAICLEDYtvgDK-LRLLPCCHKFHAACVDSW-----LTSWRTFCPVCK 274
           ********99555.******************.....5555666****6 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) (By similarity).

Protein Sequence
(Fasta)

MNRALVLLLY VCTVSCLASS KVILMRNNIT LSFDDIEANF APSVKGTGEI GVVYVAEPLD 60
ACQNLMNKPE QSSNETSPFV LIVRGGCSFE EKVRKAQRAG FKAAIIYDNE DRGTLIAMAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGGCAGAT TTATCTTTAG AATTTAGAGA TAAAACAAAA ATTGTTAAAC CAACAAATGG 60
ATCCACAAAA CAAAACCATG AGCTCTGAAG TCAATCTCAC CAGTCACCAT GACTCACTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1015--Disulfide bond
KW-0325--Glycoprotein
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0479--Metal-binding
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0813--Transport
KW-0926--Vacuole
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0000139--C:Golgi membrane
GO:0016021--C:integral component of membrane
GO:0000326--C:protein storage vacuole
GO:0032586--C:protein storage vacuole membrane
GO:0008270--F:zinc ion binding
GO:0015031--P:protein transport

KEGG

ath:AT1G71980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	60.56	3.00e-78	285.00
IUUC-Atr-003055	Amborella trichopoda	69.44	1.00e-114	405.00
IUUC-Aly-006479	Arabidopsis lyrata	96.88	0.00e+00	672.00
IUUC-Afu-008977	Aspergillus fumigatus	56.00	1.00e-11	63.90
IUUC-Bdi-014560	Brachypodium distachyon	64.83	3.00e-104	371.00
IUUC-Bol-015569	Brassica oleracea	85.35	2.00e-174	604.00
IUUC-Bra-017689	Brassica rapa	84.38	5.00e-162	563.00
IUUC-Cin-025554	Ciona intestinalis	35.69	5.00e-33	134.00
IUUC-Cne-027033	Cryptococcus neoformans	40.32	1.00e-11	64.30
IUUC-Dme-031765	Drosophila melanogaster	34.14	1.00e-36	146.00
IUUC-Gma-043776	Glycine max	77.19	5.00e-119	420.00
IUUC-Hvu-047205	Hordeum vulgare	65.05	1.00e-107	382.00
IUUC-Lpe-051192	Leersia perrieri	56.80	4.00e-115	407.00
IUUC-Lma-053199	Leptosphaeria maculans	56.52	9.00e-12	63.90
IUUC-Mtr-058129	Medicago truncatula	64.80	2.00e-126	444.00
IUUC-Mac-065216	Musa acuminata	57.51	3.00e-104	371.00
IUUC-Opr-070934	Ochotona princeps	48.65	1.00e-15	77.00
IUUC-Oba-075841	Oryza barthii	54.83	3.00e-107	381.00
IUUC-Obr-076703	Oryza brachyantha	55.71	7.00e-114	403.00
IUUC-Ogl-077861	Oryza glaberrima	57.11	1.00e-113	402.00
IUUC-Ogu-078205	Oryza glumaepatula	57.14	4.00e-108	384.00
IUUC-Oin-080138	Oryza indica	55.81	3.00e-106	377.00
IUUC-Olo-081024	Oryza longistaminata	67.62	2.00e-107	383.00
IUUC-Ome-081844	Oryza meridionalis	69.31	7.00e-111	393.00
IUUC-Oni-082382	Oryza nivara	57.14	8.00e-109	386.00
IUUC-Opu-083162	Oryza punctata	58.46	6.00e-112	397.00
IUUC-Oru-085099	Oryza rufipogon	54.83	6.00e-107	380.00
IUUC-Osa-086175	Oryza sativa	66.44	2.00e-112	399.00
IUUC-Ppa-095421	Physcomitrella patens	49.82	2.00e-71	262.00
IUUC-Pop-098937	Populus trichocarpa	64.38	8.00e-118	416.00
IUUC-Ppe-101970	Prunus persica	74.90	2.00e-105	375.00
IUUC-Sja-107935	Schizosaccharomyces japonicus	30.09	7.00e-16	77.40
IUUC-Smo-109274	Selaginella moellendorffii	52.35	2.00e-64	238.00
IUUC-Sit-110628	Setaria italica	54.20	1.00e-111	395.00
IUUC-Sly-110842	Solanum lycopersicum	62.53	2.00e-126	445.00
IUUC-Stu-112408	Solanum tuberosum	62.11	1.00e-122	432.00
IUUC-Sbi-114409	Sorghum bicolor	65.75	3.00e-109	388.00
IUUC-Tca-121472	Theobroma cacao	65.38	2.00e-127	448.00
IUUC-Tre-121885	Trichoderma reesei	54.90	2.00e-12	66.60
IUUC-Tvi-122633	Trichoderma virens	54.90	2.00e-12	66.20
IUUC-Tae-124150	Triticum aestivum	65.05	1.00e-108	385.00
IUUC-Tur-126455	Triticum urartu	63.76	6.00e-104	370.00
IUUC-Vvi-131355	Vitis vinifera	74.91	4.00e-113	400.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence