iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068474

Ensembl Protein ID

CADNFIAP00009323

UniProt Accession

A1CXM1; A1CXM1_NEOFI

Genbank Protein ID

EAW25373.1

Protein Name

Small nucleolar ribonucleoprotein complex subunit, putative

Genbank Nucleotide ID

DS027685

Gene Name

NFIA_108660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00009563	CADNFIAT00009563	CADNFIAP00009323

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-48	157.4	230	264
UBD/Beta-Prp	4.30e-85	284.6	26	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H + v++l++ ++ + l+s+++D+t+ vWD+rt++
   Q: 230  HVSVVRSLSYsPSeNALLSAARDKTVIVWDVRTFK 264
           999********666******************986 PP

UBD/Beta-Prp

   S: 59   kfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee........tlsghdgvvncv 143
            ++ +g +lvt+   +++ v dl+tg+++ +l+g  + ++sl++sps +++++ s+    r++ l    + +         tl++h++ v + 
   Q: 26   ALDASGRLLVTCVGEDALIV-DLETGDQLASLEGDGEIITSLAISPSASHVIVCSRSMSMRIYALTPFDETSRtvetsllrTLKPHTAPVVTS 117
           55667779****99999999.*****************************************9887777766667779*************** PP
   S: 144  vvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls.............fdsng..........................kelvs 197
           +v+p++ ll++G++D+ +++Wd++ g + +t+ g h + +  l                  +                          ++l+s
   Q: 118  TVDPTSTLLATGAADGSIKVWDIRGGYITHTFHG-HGGVISALCffqvpvqdgdtksS---SkkkqskkksvdldgdddmaesdsavgFRLAS 206
           ********************************99.********988887766666551...145566777888888999999999******** PP
   S: 198  gsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           g++ g+v++wdl + + v tl+ h + v+s+  sp ++ l+s++ D+++ +Wd+r+ ++ 
   Q: 207  GDEEGKVRVWDLNKRKSVATLESHVSVVRSLSYSPSENALLSAARDKTVIVWDVRTFKTR 266
           *******************************************************97765 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MSKAVVKTTF EASRTLRPIY TGGSTALDAS GRLLVTCVGE DALIVDLETG DQLASLEGDG 60
EIITSLAISP SASHVIVCSR SMSMRIYALT PFDETSRTVE TSLLRTLKPH TAPVVTSTVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTAAAG CTGTTGTCAA GACGACTTTC GAGGCGTCTC GCACGCTTCG TCCCATATAT 60
ACCGGAGGGA GTACCGCGCT CGATGCCAGT GGTCGGTTAC TGGTGACTTG TGTCGGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0019013--C:viral nucleocapsid
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

nfi:NFIA_108660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	27.83	6.00e-76	277.00
IUUC-Aml-002376	Ailuropoda melanoleuca	28.78	5.00e-100	357.00
IUUC-Atr-002486	Amborella trichopoda	28.06	7.00e-103	367.00
IUUC-Apl-003519	Anas platyrhynchos	27.48	3.00e-89	321.00
IUUC-Aca-004363	Anolis carolinensis	28.34	7.00e-49	186.00
IUUC-Aly-006152	Arabidopsis lyrata	27.29	3.00e-90	324.00
IUUC-Ath-006966	Arabidopsis thaliana	26.97	5.00e-92	330.00
IUUC-Ago-007746	Ashbya gossypii	32.70	1.00e-121	428.00
IUUC-Acl-008009	Aspergillus clavatus	86.62	0.00e+00	1603.00
IUUC-Afl-008681	Aspergillus flavus	80.82	0.00e+00	1412.00
IUUC-Afu-008798	Aspergillus fumigatus	96.21	0.00e+00	1715.00
IUUC-Ani-009278	Aspergillus nidulans	76.20	0.00e+00	1434.00
IUUC-Ang-009640	Aspergillus niger	79.16	0.00e+00	1425.00
IUUC-Aor-010160	Aspergillus oryzae	80.82	0.00e+00	1410.00
IUUC-Ate-010320	Aspergillus terreus	79.75	0.00e+00	1490.00
IUUC-Bgr-012054	Blumeria graminis	47.51	0.00e+00	799.00
IUUC-Bta-012611	Bos taurus	28.72	6.00e-96	343.00
IUUC-Bci-013797	Botrytis cinerea	53.25	0.00e+00	934.00
IUUC-Bdi-014384	Brachypodium distachyon	29.10	1.00e-98	352.00
IUUC-Bol-015097	Brassica oleracea	27.40	1.00e-92	332.00
IUUC-Bra-017798	Brassica rapa	27.40	1.00e-92	332.00
IUUC-Cel-018664	Caenorhabditis elegans	25.23	7.00e-71	260.00
IUUC-Cja-019092	Callithrix jacchus	28.96	6.00e-97	347.00
IUUC-Cfa-021040	Canis familiaris	27.84	8.00e-95	339.00
IUUC-Cpo-022529	Cavia porcellus	28.80	5.00e-96	343.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	42.86	4.00e-33	131.00
IUUC-Csa-024205	Chlorocebus sabaeus	29.17	2.00e-98	351.00
IUUC-Cin-025560	Ciona intestinalis	27.40	4.00e-97	347.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	50.16	0.00e+00	870.00
IUUC-Cne-027082	Cryptococcus neoformans	32.51	9.00e-124	436.00
IUUC-Cme-027159	Cyanidioschyzon merolae	23.20	1.00e-21	97.80
IUUC-Dre-028138	Danio rerio	30.10	1.00e-87	316.00
IUUC-Dno-029914	Dasypus novemcinctus	26.28	4.00e-45	174.00
IUUC-Dor-030685	Dipodomys ordii	32.57	1.00e-65	243.00
IUUC-Dse-031429	Dothistroma septosporum	51.30	0.00e+00	907.00
IUUC-Dme-031995	Drosophila melanogaster	22.79	3.00e-54	205.00
IUUC-Ete-033086	Echinops telfairi	29.27	7.00e-54	204.00
IUUC-Eca-034354	Equus caballus	29.14	1.00e-95	342.00
IUUC-Eeu-034832	Erinaceus europaeus	28.50	3.00e-51	194.00
IUUC-Fca-036136	Felis catus	28.27	1.00e-91	329.00
IUUC-Fal-036859	Ficedula albicollis	28.91	6.00e-104	370.00
IUUC-Fox-037863	Fusarium oxysporum	48.16	0.00e+00	788.00
IUUC-Fso-038389	Fusarium solani	50.47	0.00e+00	875.00
IUUC-Gmo-038711	Gadus morhua	25.59	1.00e-76	279.00
IUUC-Ggr-039820	Gaeumannomyces graminis	50.58	0.00e+00	857.00
IUUC-Gga-040263	Gallus gallus	28.44	6.00e-102	363.00
IUUC-Gac-041291	Gasterosteus aculeatus	27.86	1.00e-96	346.00
IUUC-Gma-044328	Glycine max	29.33	5.00e-108	383.00
IUUC-Ggo-044693	Gorilla gorilla	29.38	8.00e-100	356.00
IUUC-Hsa-046048	Homo sapiens	29.59	1.00e-99	355.00
IUUC-Hvu-047608	Hordeum vulgare	28.51	5.00e-97	347.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	29.49	1.00e-103	369.00
IUUC-Kpa-049209	Komagataella pastoris	31.47	2.00e-129	454.00
IUUC-Lch-050085	Latimeria chalumnae	28.33	4.00e-93	334.00
IUUC-Lpe-050945	Leersia perrieri	28.79	2.00e-98	352.00
IUUC-Loc-052679	Lepisosteus oculatus	30.04	1.00e-111	395.00
IUUC-Laf-053685	Loxodonta africana	28.65	2.00e-87	315.00
IUUC-Mcc-055861	Macaca mulatta	28.86	2.00e-96	345.00
IUUC-Meu-056820	Macropus eugenii	28.77	6.00e-41	160.00
IUUC-Mor-057234	Magnaporthe oryzae	51.63	0.00e+00	850.00
IUUC-Mpo-057456	Magnaporthe poae	50.57	0.00e+00	694.00
IUUC-Mtr-058122	Medicago truncatula	29.42	5.00e-108	384.00
IUUC-Mla-058980	Melampsora laricipopulina	27.89	6.00e-98	350.00
IUUC-Mga-060080	Meleagris gallopavo	28.10	1.00e-101	362.00
IUUC-Mvi-060338	Microbotryum violaceum	33.56	1.00e-139	489.00
IUUC-Mmr-060762	Microcebus murinus	28.92	3.00e-95	341.00
IUUC-Mdo-061975	Monodelphis domestica	27.93	4.00e-95	340.00
IUUC-Mmu-064038	Mus musculus	28.71	8.00e-97	346.00
IUUC-Mac-065189	Musa acuminata	27.93	2.00e-96	345.00
IUUC-Mpu-066526	Mustela putorius furo	28.65	2.00e-95	342.00
IUUC-Mlu-067716	Myotis lucifugus	29.85	3.00e-104	371.00
IUUC-Ncr-068826	Neurospora crassa	48.89	0.00e+00	806.00
IUUC-Nle-069832	Nomascus leucogenys	29.25	1.00e-98	352.00
IUUC-Opr-071183	Ochotona princeps	28.97	1.00e-91	329.00
IUUC-Ont-072371	Oreochromis niloticus	27.97	4.00e-97	347.00
IUUC-Oan-073491	Ornithorhynchus anatinus	28.96	7.00e-81	293.00
IUUC-Oba-075963	Oryza barthii	29.12	2.00e-99	355.00
IUUC-Obr-076173	Oryza brachyantha	29.23	6.00e-99	353.00
IUUC-Ogl-077692	Oryza glaberrima	29.12	2.00e-99	355.00
IUUC-Ogu-078965	Oryza glumaepatula	29.12	2.00e-99	355.00
IUUC-Oin-079708	Oryza indica	29.01	1.00e-98	352.00
IUUC-Olo-080679	Oryza longistaminata	29.01	2.00e-97	348.00
IUUC-Oni-082960	Oryza nivara	28.90	3.00e-98	351.00
IUUC-Opu-083282	Oryza punctata	28.81	3.00e-93	334.00
IUUC-Oru-085224	Oryza rufipogon	29.12	2.00e-99	355.00
IUUC-Osa-085320	Oryza sativa	29.12	2.00e-99	355.00
IUUC-Ola-086370	Oryzias latipes	25.06	1.00e-35	143.00
IUUC-Olu-087814	Ostreococcus lucimarinus	26.75	5.00e-67	247.00
IUUC-Oga-088458	Otolemur garnettii	29.75	5.00e-103	367.00
IUUC-Oar-090032	Ovis aries	26.92	5.00e-65	240.00
IUUC-Ptr-090749	Pan troglodytes	29.28	7.00e-99	353.00
IUUC-Pan-091691	Papio anubis	27.81	1.00e-89	322.00
IUUC-Psi-093200	Pelodiscus sinensis	28.17	2.00e-100	358.00
IUUC-Pma-094165	Petromyzon marinus	25.87	2.00e-59	221.00
IUUC-Pno-095048	Phaeosphaeria nodorum	52.39	0.00e+00	726.00
IUUC-Ppa-095336	Physcomitrella patens	30.30	9.00e-104	370.00
IUUC-Pfo-096132	Poecilia formosa	27.67	5.00e-93	334.00
IUUC-Pab-097855	Pongo abelii	29.38	7.00e-99	353.00
IUUC-Pop-099434	Populus trichocarpa	27.36	3.00e-89	321.00
IUUC-Pca-100232	Procavia capensis	31.77	9.00e-39	153.00
IUUC-Ppe-101665	Prunus persica	28.66	6.00e-101	360.00
IUUC-Pva-102178	Pteropus vampyrus	29.56	2.00e-99	355.00
IUUC-Pgr-103288	Puccinia graminis	28.51	6.00e-99	353.00
IUUC-Ptt-103808	Puccinia triticina	28.40	1.00e-82	299.00
IUUC-Pte-104205	Pyrenophora teres	52.99	0.00e+00	900.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	52.50	0.00e+00	865.00
IUUC-Rno-105617	Rattus norvegicus	29.06	3.00e-98	351.00
IUUC-Sce-106281	Saccharomyces cerevisiae	32.08	6.00e-119	419.00
IUUC-Sha-107378	Sarcophilus harrisii	28.35	1.00e-91	329.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	36.28	3.00e-140	490.00
IUUC-Spo-108361	Schizosaccharomyces pombe	35.04	3.00e-135	473.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	54.53	0.00e+00	973.00
IUUC-Smo-109257	Selaginella moellendorffii	31.37	2.00e-112	398.00
IUUC-Sit-110258	Setaria italica	28.44	9.00e-100	356.00
IUUC-Sly-111521	Solanum lycopersicum	27.62	2.00e-96	345.00
IUUC-Stu-112718	Solanum tuberosum	42.03	3.00e-25	105.00
IUUC-Sbi-114768	Sorghum bicolor	28.69	2.00e-100	358.00
IUUC-Sre-115159	Sporisorium reilianum	29.41	9.00e-99	353.00
IUUC-Ssc-116342	Sus scrofa	24.69	7.00e-42	163.00
IUUC-Tgu-117320	Taeniopygia guttata	28.05	7.00e-95	340.00
IUUC-Tru-118024	Takifugu rubripes	27.76	3.00e-91	328.00
IUUC-Tni-119971	Tetraodon nigroviridis	28.36	1.00e-92	332.00
IUUC-Tca-121248	Theobroma cacao	28.37	3.00e-98	351.00
IUUC-Tre-122079	Trichoderma reesei	50.95	0.00e+00	866.00
IUUC-Tvi-122554	Trichoderma virens	49.89	0.00e+00	851.00
IUUC-Tae-124473	Triticum aestivum	28.79	2.00e-100	358.00
IUUC-Tur-126436	Triticum urartu	30.13	4.00e-70	258.00
IUUC-Tme-126942	Tuber melanosporum	44.99	0.00e+00	674.00
IUUC-Ttr-128964	Tursiops truncatus	28.62	3.00e-95	341.00
IUUC-Uma-129473	Ustilago maydis	29.62	3.00e-111	395.00
IUUC-Vda-129749	Verticillium dahliae	50.17	0.00e+00	757.00
IUUC-Vvi-131511	Vitis vinifera	28.83	2.00e-96	345.00
IUUC-Xtr-132816	Xenopus tropicalis	28.88	3.00e-62	231.00
IUUC-Xma-133672	Xiphophorus maculatus	27.31	1.00e-94	339.00
IUUC-Yli-134602	Yarrowia lipolytica	38.50	8.00e-163	565.00
IUUC-Zma-135976	Zea mays	28.72	1.00e-95	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence