iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114136

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G232800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g027200	Sb02g027200.1	Sb02g027200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-08	35.0	134	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++ +++lp C Hvfh dC+  w         + +CP+Cr
   Q: 134  CAVCLSEFddDETLRLLPkCSHVFHPDCIDTW------LASHVTCPVCR 176
           ********6533499999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDTTLLRSNG RRRLLPFFLL LLAAADLTAV QGQQGQQQQQ GGYYQQQSFS PSMAIVIVVL 60
IAAFFFLGFF SIYVRHCYAG GDSSNSTDPA GPNGAAARSR RQQRGLDAAV LESFPTMAYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCCAATGG ACACGACACT CCTGCGGAGC AATGGCCGCC GCCGCCTCCT GCCCTTCTTC 60
CTTCTCTTGC TCGCTGCCGC CGATCTCACG GCGGTGCAGG GCCAGCAGGG GCAGCAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g027200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000107	Aegilops tauschii	59.73	1.00e-63	235.00
IUUC-Atr-002716	Amborella trichopoda	59.72	2.00e-47	182.00
IUUC-Aly-005713	Arabidopsis lyrata	44.27	4.00e-53	201.00
IUUC-Ath-006746	Arabidopsis thaliana	43.95	1.00e-52	199.00
IUUC-Afu-009087	Aspergillus fumigatus	37.65	1.00e-12	65.50
IUUC-Bdi-014474	Brachypodium distachyon	85.94	6.00e-62	230.00
IUUC-Bol-016322	Brassica oleracea	41.08	4.00e-46	178.00
IUUC-Bra-017552	Brassica rapa	43.25	3.00e-46	178.00
IUUC-Gma-043623	Glycine max	50.00	5.00e-51	193.00
IUUC-Hvu-047493	Hordeum vulgare	72.99	9.00e-74	269.00
IUUC-Lpe-051270	Leersia perrieri	63.49	4.00e-89	320.00
IUUC-Mtr-058791	Medicago truncatula	47.39	6.00e-46	177.00
IUUC-Oba-075528	Oryza barthii	65.87	1.00e-81	295.00
IUUC-Obr-076839	Oryza brachyantha	69.27	5.00e-112	396.00
IUUC-Ogl-076953	Oryza glaberrima	69.58	4.00e-81	293.00
IUUC-Ogu-078122	Oryza glumaepatula	64.81	8.00e-83	300.00
IUUC-Oin-079189	Oryza indica	65.86	1.00e-85	309.00
IUUC-Oni-082648	Oryza nivara	66.13	4.00e-81	294.00
IUUC-Opu-083745	Oryza punctata	71.58	2.00e-90	324.00
IUUC-Oru-084417	Oryza rufipogon	65.87	1.00e-81	295.00
IUUC-Osa-085388	Oryza sativa	70.12	2.00e-83	301.00
IUUC-Ppa-095506	Physcomitrella patens	51.85	2.00e-29	122.00
IUUC-Pop-098838	Populus trichocarpa	45.20	4.00e-47	181.00
IUUC-Ppe-101166	Prunus persica	41.46	3.00e-50	191.00
IUUC-Sha-106505	Sarcophilus harrisii	28.00	1.00e-14	72.80
IUUC-Smo-108906	Selaginella moellendorffii	54.55	8.00e-25	103.00
IUUC-Sit-109787	Setaria italica	72.78	1.00e-103	369.00
IUUC-Sly-111277	Solanum lycopersicum	40.51	1.00e-46	179.00
IUUC-Stu-112280	Solanum tuberosum	39.20	2.00e-47	181.00
IUUC-Tca-120966	Theobroma cacao	41.84	6.00e-55	207.00
IUUC-Tae-123008	Triticum aestivum	79.10	5.00e-55	207.00
IUUC-Vvi-131515	Vitis vinifera	64.39	8.00e-38	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence