iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107075

Ensembl Protein ID

ENSSHAP00000012009.1

UniProt Accession

G3W9A4; G3W9A4_SARHA

Genbank Protein ID

ENSSHAP00000012009

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01103739

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000010299.1	ENSSHAT00000012107.1	ENSSHAP00000012009.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	96.73	4.00e-173	604.00	IUUC-Hsa-046680
UBD/Other/Other	96.73	4.00e-173	604.00	IUUC-Hsa-046680
UBD/Other/Other	37.65	6.00e-52	199.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

QFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTTCTCTT TCAATATGTT TGATCATCCT ATTCCCCGCG TGTTCCAGAA CCGCTTCTCC 60
ACCCAGTACC GGTGTTTCTC TGTGTCCATG CTTGCAGGAC CTAATGACAG GTCAGATGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	51.80	1.00e-65	243.00
IUUC-Aml-001398	Ailuropoda melanoleuca	96.73	2.00e-174	603.00
IUUC-Atr-002449	Amborella trichopoda	49.76	3.00e-55	207.00
IUUC-Apl-004065	Anas platyrhynchos	94.66	2.00e-145	508.00
IUUC-Aca-004973	Anolis carolinensis	92.16	2.00e-170	591.00
IUUC-Aly-005501	Arabidopsis lyrata	51.52	4.00e-66	244.00
IUUC-Ath-007324	Arabidopsis thaliana	53.04	5.00e-68	250.00
IUUC-Ago-007918	Ashbya gossypii	38.20	1.00e-54	206.00
IUUC-Acl-008362	Aspergillus clavatus	41.74	1.00e-66	246.00
IUUC-Afl-008690	Aspergillus flavus	53.95	7.00e-64	237.00
IUUC-Afu-008787	Aspergillus fumigatus	42.34	8.00e-65	240.00
IUUC-Ani-009385	Aspergillus nidulans	56.57	4.00e-57	214.00
IUUC-Ang-009709	Aspergillus niger	56.22	5.00e-64	238.00
IUUC-Aor-010240	Aspergillus oryzae	53.95	7.00e-64	237.00
IUUC-Ate-010551	Aspergillus terreus	56.31	9.00e-65	240.00
IUUC-Ame-011417	Astyanax mexicanus	89.58	5.00e-159	553.00
IUUC-Bgr-011986	Blumeria graminis	56.25	7.00e-62	230.00
IUUC-Bta-012559	Bos taurus	96.46	2.00e-126	444.00
IUUC-Bci-013767	Botrytis cinerea	56.08	4.00e-58	218.00
IUUC-Bdi-014336	Brachypodium distachyon	52.44	8.00e-66	243.00
IUUC-Bol-015824	Brassica oleracea	44.92	2.00e-66	245.00
IUUC-Bra-016732	Brassica rapa	44.59	3.00e-66	244.00
IUUC-Cel-018590	Caenorhabditis elegans	41.14	2.00e-50	192.00
IUUC-Cja-019487	Callithrix jacchus	97.06	1.00e-174	604.00
IUUC-Cfa-020497	Canis familiaris	97.06	7.00e-175	605.00
IUUC-Cpo-022150	Cavia porcellus	96.73	2.00e-174	604.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	50.22	3.00e-58	218.00
IUUC-Csa-023602	Chlorocebus sabaeus	96.73	2.00e-174	604.00
IUUC-Cin-025594	Ciona intestinalis	57.72	8.00e-94	336.00
IUUC-Csv-026040	Ciona savignyi	55.59	1.00e-95	342.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	44.24	2.00e-52	199.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	2.00e-39	156.00
IUUC-Cme-027323	Cyanidioschyzon merolae	47.47	6.00e-42	164.00
IUUC-Dre-027987	Danio rerio	86.97	1.00e-152	531.00
IUUC-Dor-030294	Dipodomys ordii	95.75	6.00e-172	595.00
IUUC-Dse-031411	Dothistroma septosporum	37.35	9.00e-57	213.00
IUUC-Dme-031798	Drosophila melanogaster	55.87	2.00e-93	335.00
IUUC-Ete-032432	Echinops telfairi	96.08	8.00e-173	598.00
IUUC-Eca-034427	Equus caballus	96.73	2.00e-174	604.00
IUUC-Eeu-034917	Erinaceus europaeus	69.93	2.00e-110	392.00
IUUC-Fca-035380	Felis catus	97.06	7.00e-175	605.00
IUUC-Fal-037659	Ficedula albicollis	94.70	1.00e-169	588.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	3.00e-21	94.00
IUUC-Fso-038111	Fusarium solani	45.81	2.00e-52	199.00
IUUC-Gmo-039298	Gadus morhua	86.41	3.00e-146	510.00
IUUC-Ggr-039771	Gaeumannomyces graminis	51.03	3.00e-56	212.00
IUUC-Gga-040313	Gallus gallus	95.75	2.00e-173	600.00
IUUC-Gac-042009	Gasterosteus aculeatus	85.11	4.00e-146	510.00
IUUC-Gma-043844	Glycine max	52.28	3.00e-68	251.00
IUUC-Ggo-044639	Gorilla gorilla	86.55	3.00e-169	587.00
IUUC-Hsa-046680	Homo sapiens	96.73	2.00e-174	604.00
IUUC-Hvu-047860	Hordeum vulgare	52.89	2.00e-65	242.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	96.73	2.00e-174	603.00
IUUC-Kpa-049136	Komagataella pastoris	36.57	1.00e-55	210.00
IUUC-Lch-050607	Latimeria chalumnae	89.40	3.00e-157	547.00
IUUC-Lpe-050726	Leersia perrieri	50.23	1.00e-61	229.00
IUUC-Loc-051848	Lepisosteus oculatus	89.29	3.00e-160	556.00
IUUC-Lma-053187	Leptosphaeria maculans	41.95	4.00e-64	238.00
IUUC-Laf-053569	Loxodonta africana	95.81	1.00e-172	598.00
IUUC-Mcc-055275	Macaca mulatta	96.41	1.00e-173	601.00
IUUC-Mor-056967	Magnaporthe oryzae	50.00	8.00e-57	214.00
IUUC-Mpo-057399	Magnaporthe poae	51.55	1.00e-56	213.00
IUUC-Mtr-058353	Medicago truncatula	50.87	1.00e-64	239.00
IUUC-Mla-058830	Melampsora laricipopulina	44.56	1.00e-42	167.00
IUUC-Mga-059803	Meleagris gallopavo	95.04	8.00e-146	508.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	3.00e-45	176.00
IUUC-Mmr-060573	Microcebus murinus	96.41	7.00e-174	602.00
IUUC-Mdo-062831	Monodelphis domestica	99.35	3.00e-177	613.00
IUUC-Mmu-064302	Mus musculus	96.41	5.00e-173	599.00
IUUC-Mac-064745	Musa acuminata	53.33	2.00e-65	242.00
IUUC-Mpu-065922	Mustela putorius furo	96.41	3.00e-174	603.00
IUUC-Mlu-068236	Myotis lucifugus	95.47	2.00e-172	597.00
IUUC-Nfi-068417	Neosartorya fischeri	42.34	7.00e-65	240.00
IUUC-Ncr-068747	Neurospora crassa	48.73	9.00e-55	207.00
IUUC-Nle-069948	Nomascus leucogenys	86.30	1.00e-169	588.00
IUUC-Opr-070919	Ochotona princeps	81.67	4.00e-137	480.00
IUUC-Ont-071467	Oreochromis niloticus	86.45	1.00e-152	531.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.51	6.00e-70	255.00
IUUC-Ocu-074427	Oryctolagus cuniculus	96.73	7.00e-167	579.00
IUUC-Oba-075440	Oryza barthii	51.06	1.00e-66	246.00
IUUC-Obr-076275	Oryza brachyantha	51.15	7.00e-60	223.00
IUUC-Ogl-077237	Oryza glaberrima	51.06	1.00e-66	246.00
IUUC-Ogu-078934	Oryza glumaepatula	51.06	1.00e-66	246.00
IUUC-Oin-079475	Oryza indica	52.52	3.00e-67	248.00
IUUC-Olo-080285	Oryza longistaminata	59.64	5.00e-57	213.00
IUUC-Ome-081887	Oryza meridionalis	51.06	2.00e-66	245.00
IUUC-Oni-082064	Oryza nivara	51.49	6.00e-67	247.00
IUUC-Opu-083610	Oryza punctata	50.64	3.00e-66	244.00
IUUC-Oru-084911	Oryza rufipogon	44.09	2.00e-67	248.00
IUUC-Osa-085366	Oryza sativa	51.06	1.00e-66	246.00
IUUC-Ola-086846	Oryzias latipes	76.08	5.00e-139	486.00
IUUC-Olu-087879	Ostreococcus lucimarinus	45.49	3.00e-57	214.00
IUUC-Oga-089017	Otolemur garnettii	95.47	6.00e-172	595.00
IUUC-Oar-089970	Ovis aries	92.83	2.00e-166	577.00
IUUC-Ptr-091147	Pan troglodytes	87.99	3.00e-159	553.00
IUUC-Pan-091757	Papio anubis	89.29	6.00e-156	543.00
IUUC-Psi-093931	Pelodiscus sinensis	96.08	9.00e-174	602.00
IUUC-Pno-094775	Phaeosphaeria nodorum	51.26	2.00e-58	219.00
IUUC-Ppa-095156	Physcomitrella patens	51.79	6.00e-64	237.00
IUUC-Pfo-097295	Poecilia formosa	85.81	5.00e-151	526.00
IUUC-Pab-098537	Pongo abelii	96.73	2.00e-174	604.00
IUUC-Pop-099436	Populus trichocarpa	50.00	2.00e-66	245.00
IUUC-Pca-100631	Procavia capensis	84.30	2.00e-162	564.00
IUUC-Ppe-101259	Prunus persica	51.29	6.00e-67	247.00
IUUC-Pva-102679	Pteropus vampyrus	88.03	3.00e-155	540.00
IUUC-Pgr-103475	Puccinia graminis	45.59	7.00e-45	174.00
IUUC-Ptt-104012	Puccinia triticina	38.73	2.00e-32	132.00
IUUC-Pte-104071	Pyrenophora teres	50.23	3.00e-61	228.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	50.23	3.00e-61	228.00
IUUC-Rno-104858	Rattus norvegicus	96.41	4.00e-173	600.00
IUUC-Sce-106174	Saccharomyces cerevisiae	38.11	2.00e-54	206.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	44.33	1.00e-60	226.00
IUUC-Spo-108259	Schizosaccharomyces pombe	46.75	3.00e-54	205.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	39.55	2.00e-50	192.00
IUUC-Smo-109290	Selaginella moellendorffii	53.71	1.00e-65	243.00
IUUC-Sit-109992	Setaria italica	50.64	3.00e-65	241.00
IUUC-Sly-110858	Solanum lycopersicum	52.02	3.00e-64	238.00
IUUC-Stu-112129	Solanum tuberosum	51.12	2.00e-63	235.00
IUUC-Sar-113061	Sorex araneus	96.41	2.00e-173	601.00
IUUC-Sbi-114882	Sorghum bicolor	44.27	2.00e-66	245.00
IUUC-Sre-115104	Sporisorium reilianum	47.12	2.00e-44	173.00
IUUC-Ssc-115403	Sus scrofa	96.73	4.00e-174	603.00
IUUC-Tgu-117013	Taeniopygia guttata	96.08	6.00e-174	602.00
IUUC-Tru-118307	Takifugu rubripes	87.38	2.00e-149	521.00
IUUC-Tsy-119309	Tarsius syrichta	83.80	1.00e-65	242.00
IUUC-Tni-120209	Tetraodon nigroviridis	86.69	2.00e-146	511.00
IUUC-Tca-121421	Theobroma cacao	51.30	1.00e-66	246.00
IUUC-Tre-122235	Trichoderma reesei	45.64	7.00e-52	197.00
IUUC-Tvi-122421	Trichoderma virens	45.59	2.00e-52	199.00
IUUC-Tae-124587	Triticum aestivum	51.80	4.00e-66	244.00
IUUC-Tur-126353	Triticum urartu	36.89	5.00e-26	112.00
IUUC-Tme-126918	Tuber melanosporum	52.26	3.00e-59	222.00
IUUC-Ttr-129286	Tursiops truncatus	87.50	4.00e-159	553.00
IUUC-Uma-129404	Ustilago maydis	48.17	9.00e-46	177.00
IUUC-Vda-129746	Verticillium dahliae	47.29	2.00e-53	202.00
IUUC-Vpa-130648	Vicugna pacos	94.12	1.00e-23	103.00
IUUC-Vvi-131301	Vitis vinifera	51.74	7.00e-66	243.00
IUUC-Xtr-132583	Xenopus tropicalis	91.18	8.00e-164	568.00
IUUC-Xma-133129	Xiphophorus maculatus	86.13	3.00e-151	527.00
IUUC-Yli-134515	Yarrowia lipolytica	46.19	3.00e-51	195.00
IUUC-Zma-135266	Zea mays	43.85	2.00e-66	245.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence