iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044360

UUCD1 version

UUC-GlM-01324

Ensembl Protein ID

GLYMA02G08880.2

UniProt Accession

K7K719; K7K719_SOYBN

Genbank Protein ID

KRH70275.1; KRH70276.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000835; CM000835

Gene Name

LOC100796328; GLYMA_02G080600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G08880	GLYMA02G08880.2	GLYMA02G08880.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-62	205.3	407	444
UBD/Beta-Prp	4.30e-75	254.3	107	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH ++v+ +++  d +ll+sGs D t+kvWD+rt +l 
   Q: 407  GHVGPVYQISWsADsRLLLSGSKDSTLKVWDIRTRKLK 444
           8***********555*****************998776 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghd 137
           + +++sgh ++v +v fspdg  l++gs D +++ wdl t ++++t +gh++ vls+++sp+g++lvsGs+   + +wd +tg+ l ++l gh+
   Q: 107  CTATISGHAEAVLSVAFSPDGRQLASGSGDTAVRFWDLTTQTPLYTCTGHKNWVLSIAWSPDGKYLVSGSKTGELICWDPQTGKSLGNPLIGHK 200
           57899***************************************************************************************** PP
   S: 138  gvvncvvvhpdg.n....llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk 226
           ++++++++ p   n     +vs+s+D+  r+Wd++ +k++  l+g ht +++++++  +g  + +gs+d t+k+w+  +g+ +r+l+gh  +v+
   Q: 201  KWITGISWEPVHlNapcrRFVSASKDGDARIWDVSLKKCVMCLSG-HTLAITCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELRGHGHWVN 292
           ******9988644422228*************************9.************98.99******************************* PP
   S: 227  svrfspnderlvs 239
           s+++s  +e+++ 
   Q: 293  SLALS--TEYVLR 303
           ****9..555544 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEDETETMVE KREIINNVMC LLTDPDGTPL GAPMYLPQNA GPQHLIQIVN KLLNNEEKLP 60
YSFYISDEEL LVPLETYLLK NKASVEKALP IVCQPQAIFR IRPVNRCTAT ISGHAEAVLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTGATCGA AGCAACAGAC CCTCCTACCT CACTCCACAT CACTTCTTTC TTAACGGGAC 60
GGATGTTATC GAATCAAAGC CATCGAATTT TTAATAATTA TATCTGACGG CTTAAATTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005840--C:ribosome
GO:0000027--P:ribosomal large subunit assembly

KEGG

gmx:100796328

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003964	Anas platyrhynchos	58.85	3.00e-163	568.00
IUUC-Aly-006396	Arabidopsis lyrata	78.49	0.00e+00	795.00
IUUC-Ath-007278	Arabidopsis thaliana	78.71	0.00e+00	795.00
IUUC-Acl-008298	Aspergillus clavatus	48.40	8.00e-122	430.00
IUUC-Afl-008581	Aspergillus flavus	55.52	5.00e-114	404.00
IUUC-Afu-008906	Aspergillus fumigatus	48.08	1.00e-119	422.00
IUUC-Ani-009189	Aspergillus nidulans	47.77	3.00e-120	425.00
IUUC-Ang-009630	Aspergillus niger	50.33	2.00e-128	452.00
IUUC-Ate-010278	Aspergillus terreus	51.03	1.00e-122	433.00
IUUC-Ame-011890	Astyanax mexicanus	57.23	3.00e-163	568.00
IUUC-Bol-015501	Brassica oleracea	80.22	0.00e+00	804.00
IUUC-Bra-017642	Brassica rapa	80.00	0.00e+00	801.00
IUUC-Dre-028515	Danio rerio	58.30	4.00e-164	570.00
IUUC-Eeu-035013	Erinaceus europaeus	64.25	1.00e-77	283.00
IUUC-Fal-037069	Ficedula albicollis	62.25	2.00e-92	331.00
IUUC-Fox-038059	Fusarium oxysporum	48.85	5.00e-122	431.00
IUUC-Fso-038445	Fusarium solani	48.85	3.00e-121	428.00
IUUC-Gga-040303	Gallus gallus	62.65	3.00e-92	331.00
IUUC-Mga-059252	Meleagris gallopavo	61.98	4.00e-136	477.00
IUUC-Nfi-068484	Neosartorya fischeri	47.65	2.00e-120	426.00
IUUC-Opr-070220	Ochotona princeps	52.95	1.00e-144	506.00
IUUC-Smo-108855	Selaginella moellendorffii	68.88	0.00e+00	713.00
IUUC-Tgu-116798	Taeniopygia guttata	56.81	1.00e-164	572.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence