iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058458

Ensembl Protein ID

KEH36015

UniProt Accession

G7ZWL4; G7ZWL4_MEDTR

Genbank Protein ID

KEH36015.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g110048

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g110048	KEH36015	KEH36015

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	7.80e-31	107.5	109	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltc+tVadm+kgktpeeiR+tFnienDftp Ee++vR+EnqWA
   Q: 109  KSLLDLTCQTVADMMKGKTPEEIRNTFNIENDFTPQEEEEVRRENQWA 156
           89*********************************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSYTKKITL NSSDGETFKV SKMVARESQV IKHMIEEDCA NEAIPLQDVT ANILAMVIEY 60
CKKHVDAAAA SSDGKPSEDD LEDWDAEFVK VDKGTLFNLI DAANYLEIKS LLDLTCQTVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGTCTTCA TACACCAAGA AGATCACTCT CAACAGTTCC GACGGCGAAA CCTTCAAAGT 60
TTCCAAGATG GTGGCACGTG AATCGCAGGT GATCAAGCAT ATGATCGAGG AAGATTGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_3g110048

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008178	Aspergillus clavatus	49.68	2.00e-39	153.00
IUUC-Afl-008452	Aspergillus flavus	48.72	3.00e-39	153.00
IUUC-Afu-008785	Aspergillus fumigatus	49.68	3.00e-39	153.00
IUUC-Ani-009312	Aspergillus nidulans	47.74	3.00e-38	150.00
IUUC-Aor-010012	Aspergillus oryzae	48.72	3.00e-39	153.00
IUUC-Ate-010375	Aspergillus terreus	47.50	2.00e-38	150.00
IUUC-Cel-018653	Caenorhabditis elegans	50.62	4.00e-40	156.00
IUUC-Cne-027058	Cryptococcus neoformans	46.34	3.00e-40	157.00
IUUC-Dse-031209	Dothistroma septosporum	47.47	9.00e-37	145.00
IUUC-Dme-032028	Drosophila melanogaster	51.90	5.00e-39	152.00
IUUC-Nfi-068309	Neosartorya fischeri	49.68	3.00e-39	153.00
IUUC-Sja-107902	Schizosaccharomyces japonicus	45.51	2.00e-37	147.00
IUUC-Spo-108033	Schizosaccharomyces pombe	45.51	4.00e-37	146.00
IUUC-Sar-112973	Sorex araneus	48.43	8.00e-33	132.00
IUUC-Tme-127078	Tuber melanosporum	51.95	2.00e-36	144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence