iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129910

Ensembl Protein ID

EGY17693

UniProt Accession

G2WUA2; G2WUA2_VERDV

Genbank Protein ID

EGY17693.1

Protein Name

Ribosomal RNA-processing protein

Genbank Nucleotide ID

DS572696

Gene Name

VDAG_01375

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01375	EGY17693	EGY17693

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-27	92.9	293	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H d vt+laf  + + l s+s+D t+kvW+l
   Q: 293  HRDAVTGLAFrRGtNQLYSCSRDRTVKVWSL 323
           99*********5559**************98 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSSFFTIPGA NKKRKRPEAS DAPKKRIAAS KGPGRAAPRG GAKGAASRSK AAAPAGKKAA 60
AADDDDESIS GSDDESIVSV SDKEEEGSGS EGEGETAAER RLRLAERYLD NVRQEVDEVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCTCGT TCTTCACCAT CCCCGGGGCG AACAAAAAGC GGAAGAGGCC CGAAGCTTCA 60
GATGCACCCA AAAAACGAAT CGCAGCATCC AAGGGCCCAG GTCGGGCCGC CCCGCGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding

KEGG

vda:VDAG_01375

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	30.29	2.00e-39	154.00
IUUC-Aml-002072	Ailuropoda melanoleuca	32.13	1.00e-61	228.00
IUUC-Atr-002824	Amborella trichopoda	28.20	6.00e-43	166.00
IUUC-Apl-003264	Anas platyrhynchos	37.87	6.00e-63	232.00
IUUC-Aca-004898	Anolis carolinensis	33.33	3.00e-65	240.00
IUUC-Aly-005535	Arabidopsis lyrata	32.29	8.00e-44	169.00
IUUC-Ath-007119	Arabidopsis thaliana	26.72	6.00e-44	170.00
IUUC-Ago-007710	Ashbya gossypii	33.27	1.00e-85	308.00
IUUC-Acl-008345	Aspergillus clavatus	42.81	1.00e-113	402.00
IUUC-Afl-008718	Aspergillus flavus	42.27	3.00e-116	410.00
IUUC-Afu-008966	Aspergillus fumigatus	42.27	3.00e-111	393.00
IUUC-Ani-009214	Aspergillus nidulans	42.94	1.00e-124	438.00
IUUC-Ang-009774	Aspergillus niger	41.40	2.00e-120	424.00
IUUC-Aor-009956	Aspergillus oryzae	42.27	3.00e-116	410.00
IUUC-Ate-010449	Aspergillus terreus	41.89	2.00e-120	424.00
IUUC-Ame-011860	Astyanax mexicanus	34.48	1.00e-73	268.00
IUUC-Bgr-012213	Blumeria graminis	53.50	2.00e-166	577.00
IUUC-Bta-012698	Bos taurus	33.06	6.00e-62	229.00
IUUC-Bci-013973	Botrytis cinerea	56.18	2.00e-150	523.00
IUUC-Bdi-014790	Brachypodium distachyon	33.92	1.00e-45	176.00
IUUC-Bol-016068	Brassica oleracea	31.23	2.00e-40	157.00
IUUC-Bra-016953	Brassica rapa	31.62	8.00e-43	166.00
IUUC-Cel-018616	Caenorhabditis elegans	36.25	5.00e-53	200.00
IUUC-Cja-019532	Callithrix jacchus	33.40	9.00e-65	239.00
IUUC-Cfa-020961	Canis familiaris	31.56	1.00e-59	222.00
IUUC-Cpo-021527	Cavia porcellus	32.80	6.00e-62	229.00
IUUC-Csa-023106	Chlorocebus sabaeus	32.60	1.00e-62	232.00
IUUC-Cin-025670	Ciona intestinalis	32.19	4.00e-67	246.00
IUUC-Csv-026172	Ciona savignyi	31.89	2.00e-65	241.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	63.92	7.00e-180	621.00
IUUC-Cne-027070	Cryptococcus neoformans	33.24	1.00e-42	165.00
IUUC-Cme-027125	Cyanidioschyzon merolae	27.09	2.00e-28	118.00
IUUC-Dre-027919	Danio rerio	35.71	7.00e-71	259.00
IUUC-Dno-029684	Dasypus novemcinctus	35.73	2.00e-56	211.00
IUUC-Dor-030363	Dipodomys ordii	29.28	2.00e-27	115.00
IUUC-Dse-031503	Dothistroma septosporum	44.96	2.00e-123	434.00
IUUC-Dme-031979	Drosophila melanogaster	32.12	1.00e-58	218.00
IUUC-Eca-033735	Equus caballus	32.44	2.00e-61	228.00
IUUC-Fca-036193	Felis catus	32.87	3.00e-63	234.00
IUUC-Fal-037058	Ficedula albicollis	32.30	6.00e-66	243.00
IUUC-Fox-038036	Fusarium oxysporum	61.75	2.00e-179	620.00
IUUC-Fso-038298	Fusarium solani	63.12	8.00e-170	588.00
IUUC-Gmo-038796	Gadus morhua	32.61	8.00e-53	199.00
IUUC-Ggr-040074	Gaeumannomyces graminis	53.75	8.00e-169	585.00
IUUC-Gga-040743	Gallus gallus	37.99	2.00e-62	230.00
IUUC-Gac-042583	Gasterosteus aculeatus	33.14	1.00e-68	251.00
IUUC-Gma-042659	Glycine max	29.35	3.00e-48	184.00
IUUC-Ggo-045543	Gorilla gorilla	33.00	9.00e-63	232.00
IUUC-Hsa-047017	Homo sapiens	33.00	1.00e-62	232.00
IUUC-Hvu-047173	Hordeum vulgare	34.12	2.00e-49	187.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	31.69	2.00e-61	228.00
IUUC-Kpa-049262	Komagataella pastoris	37.53	2.00e-86	311.00
IUUC-Lch-050566	Latimeria chalumnae	34.93	2.00e-61	228.00
IUUC-Lpe-051651	Leersia perrieri	31.67	4.00e-43	167.00
IUUC-Loc-051997	Lepisosteus oculatus	32.57	2.00e-64	238.00
IUUC-Lma-053182	Leptosphaeria maculans	46.50	3.00e-117	414.00
IUUC-Laf-054105	Loxodonta africana	32.33	6.00e-61	226.00
IUUC-Mcc-055215	Macaca mulatta	32.60	1.00e-62	231.00
IUUC-Meu-055943	Macropus eugenii	32.80	1.00e-62	231.00
IUUC-Mor-057069	Magnaporthe oryzae	53.64	2.00e-159	554.00
IUUC-Mpo-057358	Magnaporthe poae	55.58	2.00e-153	534.00
IUUC-Mtr-058209	Medicago truncatula	27.59	5.00e-50	190.00
IUUC-Mla-059043	Melampsora laricipopulina	34.77	5.00e-51	193.00
IUUC-Mga-060024	Meleagris gallopavo	36.95	6.00e-62	229.00
IUUC-Mvi-060371	Microbotryum violaceum	38.27	3.00e-59	221.00
IUUC-Mmr-061403	Microcebus murinus	32.60	1.00e-63	235.00
IUUC-Mdo-063026	Monodelphis domestica	33.19	3.00e-65	240.00
IUUC-Mmu-063646	Mus musculus	32.21	7.00e-63	233.00
IUUC-Mac-064801	Musa acuminata	27.49	9.00e-48	182.00
IUUC-Mpu-065760	Mustela putorius furo	32.73	1.00e-62	232.00
IUUC-Mlu-067963	Myotis lucifugus	31.63	7.00e-63	232.00
IUUC-Nfi-068288	Neosartorya fischeri	44.39	2.00e-114	404.00
IUUC-Ncr-068679	Neurospora crassa	52.78	1.00e-168	584.00
IUUC-Nle-069766	Nomascus leucogenys	37.75	4.00e-62	230.00
IUUC-Opr-070906	Ochotona princeps	31.20	1.00e-59	222.00
IUUC-Ont-071661	Oreochromis niloticus	33.05	7.00e-67	246.00
IUUC-Oan-073465	Ornithorhynchus anatinus	26.98	2.00e-33	135.00
IUUC-Ocu-074263	Oryctolagus cuniculus	32.28	9.00e-61	225.00
IUUC-Oba-075607	Oryza barthii	30.52	6.00e-43	166.00
IUUC-Ogl-077387	Oryza glaberrima	30.52	1.00e-44	172.00
IUUC-Ogu-078323	Oryza glumaepatula	31.10	1.00e-43	169.00
IUUC-Oin-079977	Oryza indica	29.06	7.00e-32	129.00
IUUC-Olo-080857	Oryza longistaminata	31.10	2.00e-43	167.00
IUUC-Ome-081568	Oryza meridionalis	30.81	2.00e-43	168.00
IUUC-Oni-082685	Oryza nivara	31.58	2.00e-45	175.00
IUUC-Opu-084049	Oryza punctata	30.81	5.00e-43	166.00
IUUC-Oru-084348	Oryza rufipogon	31.58	2.00e-45	175.00
IUUC-Osa-086076	Oryza sativa	31.58	2.00e-45	175.00
IUUC-Ola-086991	Oryzias latipes	33.69	2.00e-66	244.00
IUUC-Olu-087891	Ostreococcus lucimarinus	30.10	1.00e-53	202.00
IUUC-Oga-088991	Otolemur garnettii	32.34	3.00e-62	230.00
IUUC-Oar-090430	Ovis aries	33.54	2.00e-62	231.00
IUUC-Ptr-091359	Pan troglodytes	32.60	2.00e-62	231.00
IUUC-Pan-092499	Papio anubis	32.60	4.00e-62	230.00
IUUC-Pma-094447	Petromyzon marinus	29.83	6.00e-50	189.00
IUUC-Pno-095008	Phaeosphaeria nodorum	47.41	2.00e-122	430.00
IUUC-Ppa-095680	Physcomitrella patens	30.23	2.00e-54	205.00
IUUC-Pfo-096430	Poecilia formosa	33.62	7.00e-67	246.00
IUUC-Pab-097649	Pongo abelii	32.60	3.00e-62	230.00
IUUC-Pop-100037	Populus trichocarpa	28.07	9.00e-47	179.00
IUUC-Pca-100317	Procavia capensis	50.62	9.00e-44	169.00
IUUC-Ppe-101999	Prunus persica	28.02	1.00e-47	182.00
IUUC-Pva-103046	Pteropus vampyrus	32.50	2.00e-63	234.00
IUUC-Pgr-103655	Puccinia graminis	37.91	7.00e-55	206.00
IUUC-Ptt-103812	Puccinia triticina	34.73	4.00e-44	171.00
IUUC-Pte-104243	Pyrenophora teres	46.23	6.00e-119	419.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	46.62	7.00e-119	419.00
IUUC-Rno-104973	Rattus norvegicus	33.33	1.00e-63	235.00
IUUC-Sce-106329	Saccharomyces cerevisiae	33.04	6.00e-80	289.00
IUUC-Sha-106941	Sarcophilus harrisii	33.62	7.00e-66	242.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	38.41	6.00e-96	342.00
IUUC-Spo-108329	Schizosaccharomyces pombe	40.28	4.00e-104	370.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	50.91	1.00e-158	551.00
IUUC-Smo-109198	Selaginella moellendorffii	38.40	8.00e-47	179.00
IUUC-Sit-109694	Setaria italica	31.55	3.00e-46	177.00
IUUC-Sly-111294	Solanum lycopersicum	31.96	5.00e-51	193.00
IUUC-Stu-112747	Solanum tuberosum	31.68	7.00e-51	192.00
IUUC-Sbi-114694	Sorghum bicolor	31.27	4.00e-47	180.00
IUUC-Sre-114937	Sporisorium reilianum	31.09	7.00e-64	236.00
IUUC-Ssc-116127	Sus scrofa	31.40	1.00e-60	225.00
IUUC-Tgu-117242	Taeniopygia guttata	34.04	8.00e-46	174.00
IUUC-Tru-118285	Takifugu rubripes	33.00	4.00e-72	263.00
IUUC-Tni-120368	Tetraodon nigroviridis	32.26	2.00e-68	251.00
IUUC-Tca-121724	Theobroma cacao	26.83	4.00e-42	164.00
IUUC-Tre-122106	Trichoderma reesei	63.18	1.00e-176	610.00
IUUC-Tvi-122526	Trichoderma virens	63.09	0.00e+00	652.00
IUUC-Tae-125579	Triticum aestivum	34.41	2.00e-49	187.00
IUUC-Tur-126548	Triticum urartu	34.12	4.00e-49	187.00
IUUC-Tme-126985	Tuber melanosporum	47.08	3.00e-132	463.00
IUUC-Tbe-127923	Tupaia belangeri	32.62	7.00e-63	233.00
IUUC-Ttr-129308	Tursiops truncatus	29.46	1.00e-53	201.00
IUUC-Uma-129472	Ustilago maydis	29.73	1.00e-60	225.00
IUUC-Vvi-131683	Vitis vinifera	28.21	4.00e-51	193.00
IUUC-Xtr-132118	Xenopus tropicalis	33.73	1.00e-67	248.00
IUUC-Xma-133804	Xiphophorus maculatus	34.04	2.00e-67	248.00
IUUC-Yli-134639	Yarrowia lipolytica	39.52	1.00e-89	322.00
IUUC-Zma-135884	Zea mays	31.86	7.00e-47	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence