• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Sbi-114173
UUCD1 version UUC-SoB-00578
Ensembl Protein ID Sb04g001900.1
UniProt Accession C5XT28; C5XT28_SORBI
Genbank Protein ID EES04402.2
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000763
Gene Name SORBI_004G020600
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g001900 Sb04g001900.1 Sb04g001900.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 5.00e-09 37.0 33 80
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
            C  Cg+g++   +l+ C+ C++ fH  Cl +   + +p  + w+Cp+Crs
   Q: 33   RCEACGSGDAAP-ELMLCDGCDRGFHIFCLRPI-LPRVPAGD-WYCPSCRS 80
           699999998876.6******************9.*******7.******96 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MGAAGQLRRR TRARTPPGPR PEAAAAGDDD DVRCEACGSG DAAPELMLCD GCDRGFHIFC 60
LRPILPRVPA GDWYCPSCRS PASSKSQSAA AAAHTVVAKK PKQFPLVQTK IVDFFKIQRG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114173|E3,PHD|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CACCACCCTC CTCGTTCCCC CCGCCGGCCA TCTCGGATCT CGCGTGGGTA CACAGATGGG 60
CGCCGCGGGG CAGCTCCGTC GCCGGACCCG CGCGCGGACG CCGCCAGGGC CAAGACCGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114173|E3,PHD|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001214--SET_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50280--SET
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF00628--PHD
SMART

SM00249--PHD
Gene Ontology

GO:0008270--F:zinc ion binding
KEGG sbi:SORBI_04g001900
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002978 Amborella trichopoda 64.87 2.00e-97 347.00
IUUC-Acl-008162 Aspergillus clavatus 50.00 2.00e-11 64.70
IUUC-Afl-008625 Aspergillus flavus 41.30 6.00e-10 60.10
IUUC-Afu-008796 Aspergillus fumigatus 45.65 1.00e-10 62.40
IUUC-Ani-009139 Aspergillus nidulans 45.65 9.00e-11 62.80
IUUC-Aor-010155 Aspergillus oryzae 41.30 6.00e-10 60.10
IUUC-Ate-010453 Aspergillus terreus 47.83 2.00e-10 61.20
IUUC-Ame-011323 Astyanax mexicanus 51.67 9.00e-13 69.30
IUUC-Bci-013992 Botrytis cinerea 45.65 9.00e-10 59.70
IUUC-Bdi-014900 Brachypodium distachyon 76.95 2.00e-131 460.00
IUUC-Cja-018988 Callithrix jacchus 57.78 3.00e-12 67.40
IUUC-Cre-022637 Chlamydomonas reinhardtii 48.89 7.00e-06 40.80
IUUC-Csa-023575 Chlorocebus sabaeus 57.78 3.00e-12 67.80
IUUC-Cho-024914 Choloepus hoffmanni 54.35 5.00e-13 69.70
IUUC-Csv-026068 Ciona savignyi 51.06 1.00e-12 64.70
IUUC-Cgl-026613 Colletotrichum gloeosporioides 39.13 2.00e-07 51.20
IUUC-Cne-026851 Cryptococcus neoformans 56.52 7.00e-11 63.20
IUUC-Dno-029473 Dasypus novemcinctus 57.78 3.00e-12 67.80
IUUC-Dor-030281 Dipodomys ordii 57.78 6.00e-12 66.60
IUUC-Dme-032220 Drosophila melanogaster 48.89 3.00e-12 68.60
IUUC-Ete-033052 Echinops telfairi 56.52 3.00e-13 70.90
IUUC-Fso-038127 Fusarium solani 43.48 3.00e-08 54.30
IUUC-Gmo-039218 Gadus morhua 56.25 6.00e-13 69.70
IUUC-Ggr-039929 Gaeumannomyces graminis 39.13 2.00e-06 48.50
IUUC-Gac-041563 Gasterosteus aculeatus 57.45 3.00e-12 67.40
IUUC-Gma-044242 Glycine max 50.94 4.00e-26 109.00
IUUC-Ggo-044524 Gorilla gorilla 57.78 3.00e-12 67.80
IUUC-Hsa-045821 Homo sapiens 57.78 3.00e-12 67.40
IUUC-Lch-050483 Latimeria chalumnae 60.00 6.00e-12 66.60
IUUC-Lpe-051351 Leersia perrieri 79.17 2.00e-141 493.00
IUUC-Laf-053918 Loxodonta africana 57.78 3.00e-12 67.40
IUUC-Mcc-055672 Macaca mulatta 57.78 3.00e-12 67.40
IUUC-Meu-056374 Macropus eugenii 57.78 4.00e-12 67.40
IUUC-Mtr-057790 Medicago truncatula 65.27 2.00e-118 417.00
IUUC-Mla-059136 Melampsora laricipopulina 40.91 4.50e+00 23.90
IUUC-Mmr-060968 Microcebus murinus 57.78 4.00e-12 67.40
IUUC-Mdo-062945 Monodelphis domestica 57.78 3.00e-12 67.80
IUUC-Mmu-063614 Mus musculus 57.78 3.00e-12 67.80
IUUC-Mpu-066349 Mustela putorius furo 57.78 4.00e-12 67.40
IUUC-Nfi-068430 Neosartorya fischeri 45.65 1.00e-10 62.40
IUUC-Nle-070142 Nomascus leucogenys 57.78 3.00e-12 67.40
IUUC-Opr-071002 Ochotona princeps 57.78 3.00e-12 67.80
IUUC-Ont-071701 Oreochromis niloticus 62.22 1.00e-12 68.60
IUUC-Oan-073160 Ornithorhynchus anatinus 57.78 2.00e-04 41.20
IUUC-Ocu-074164 Oryctolagus cuniculus 57.78 4.00e-12 67.40
IUUC-Oba-075648 Oryza barthii 57.77 3.00e-110 390.00
IUUC-Obr-076539 Oryza brachyantha 57.44 3.00e-109 387.00
IUUC-Ogl-076971 Oryza glaberrima 58.06 1.00e-110 392.00
IUUC-Ogu-078790 Oryza glumaepatula 58.06 6.00e-111 393.00
IUUC-Oin-079240 Oryza indica 58.06 1.00e-110 391.00
IUUC-Ome-081195 Oryza meridionalis 57.48 3.00e-110 390.00
IUUC-Oni-082728 Oryza nivara 58.06 1.00e-110 392.00
IUUC-Opu-083473 Oryza punctata 58.06 1.00e-111 395.00
IUUC-Oru-084688 Oryza rufipogon 58.06 1.00e-110 392.00
IUUC-Ola-086542 Oryzias latipes 62.22 5.00e-13 69.70
IUUC-Ptr-091199 Pan troglodytes 57.78 3.00e-12 67.40
IUUC-Pan-092094 Papio anubis 57.78 3.00e-12 67.40
IUUC-Psi-092932 Pelodiscus sinensis 54.35 8.00e-14 72.80
IUUC-Pfo-096777 Poecilia formosa 62.22 2.00e-12 67.80
IUUC-Pab-098576 Pongo abelii 57.78 3.00e-12 67.40
IUUC-Pop-099061 Populus trichocarpa 66.77 1.00e-121 428.00
IUUC-Pca-100123 Procavia capensis 57.78 5.00e-12 67.00
IUUC-Pva-102893 Pteropus vampyrus 54.35 9.00e-13 69.30
IUUC-Pte-104195 Pyrenophora teres 47.83 4.00e-11 63.90
IUUC-Pyt-104566 Pyrenophora triticirepentis 47.83 3.00e-11 64.30
IUUC-Rno-105664 Rattus norvegicus 57.78 3.00e-12 67.80
IUUC-Sha-107506 Sarcophilus harrisii 57.78 3.00e-12 67.40
IUUC-Sja-107970 Schizosaccharomyces japonicus 46.81 9.00e-11 62.40
IUUC-Ssl-108489 Sclerotinia sclerotiorum 45.65 8.00e-10 59.70
IUUC-Sit-109938 Setaria italica 82.93 3.00e-138 483.00
IUUC-Sar-113052 Sorex araneus 57.78 4.00e-12 67.40
IUUC-Sre-115161 Sporisorium reilianum 44.44 3.00e-10 61.60
IUUC-Tru-118604 Takifugu rubripes 50.00 4.00e-12 67.40
IUUC-Tni-120779 Tetraodon nigroviridis 50.00 3.00e-12 67.40
IUUC-Tca-120995 Theobroma cacao 65.97 6.00e-129 452.00
IUUC-Tre-122213 Trichoderma reesei 43.48 3.00e-08 54.70
IUUC-Tvi-122263 Trichoderma virens 43.48 4.00e-08 53.90
IUUC-Tae-124910 Triticum aestivum 77.25 2.00e-129 454.00
IUUC-Tme-127087 Tuber melanosporum 54.35 1.00e-12 69.30
IUUC-Tbe-128040 Tupaia belangeri 58.33 4.00e-04 40.40
IUUC-Ttr-129242 Tursiops truncatus 57.78 4.00e-12 67.40
IUUC-Uma-129590 Ustilago maydis 46.67 2.00e-11 65.50
IUUC-Vpa-130046 Vicugna pacos 54.35 9.00e-13 69.30
IUUC-Vvi-131714 Vitis vinifera 66.27 2.00e-119 421.00
IUUC-Xtr-132132 Xenopus tropicalis 54.35 8.00e-13 69.30
IUUC-Xma-133598 Xiphophorus maculatus 62.22 2.00e-12 68.20
IUUC-Zma-135829 Zea mays 53.33 3.00e-11 64.30
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved