iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049202

Ensembl Protein ID

CAY71430

UniProt Accession

C4R755; C4R755_KOMPG

Genbank Protein ID

CAY71430.1

Protein Name

Subunit of TFIIH and nucleotide excision repair factor 3 complexes

Genbank Nucleotide ID

FN392322

Gene Name

PAS_chr4_0204

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr4_0204	CAY71430	CAY71430

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	31.96	2.00e-26	117.00	IUUC-Hsa-045876
E3 activity/RING/RING	42.63	2.00e-61	230.00	IUUC-Sce-106405

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MDTEEYCPIC KTDKYLSPDM KFLINPECYH KICESCVDRF YSLGPSKCMY PNCNKILRRN 60
KFKTQVFDDL SIEKECDVRS RVMKVFNKNE EDFSDLKDYN QYLEEIEDIV NNLVNNVDIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATACTG AAGAATATTG CCCCATATGC AAGACAGACA AGTATCTGTC TCCGGATATG 60
AAGTTTCTGA TCAATCCAGA GTGCTATCAC AAGATCTGTG AATCATGTGT TGATCGCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015877--Cdk-activating_kinase_MAT1_cen
IPR004575--MAT1/Tfb3
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1

Pfam

PF06391--MAT1
PF17121--zf-C3HC4_5

Gene Ontology

GO:0005829--C:cytosol
GO:0070985--C:TFIIK complex
GO:0061575--F:cyclin-dependent protein serine/threonine kinase activator activity
GO:0008270--F:zinc ion binding
GO:0007049--P:cell cycle
GO:1901409--P:positive regulation of phosphorylation of RNA polymerase II C-terminal domain

KEGG

ppa:PAS_chr4_0204

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002414	Ailuropoda melanoleuca	31.43	7.00e-36	142.00
IUUC-Atr-002627	Amborella trichopoda	44.12	2.00e-14	69.70
IUUC-Apl-003312	Anas platyrhynchos	29.29	6.00e-25	105.00
IUUC-Aca-004731	Anolis carolinensis	29.62	4.00e-34	136.00
IUUC-Aly-006244	Arabidopsis lyrata	40.00	6.00e-15	71.60
IUUC-Ath-007136	Arabidopsis thaliana	40.54	5.00e-14	68.20
IUUC-Ago-007788	Ashbya gossypii	43.41	2.00e-69	253.00
IUUC-Acl-008179	Aspergillus clavatus	33.04	2.00e-55	207.00
IUUC-Afl-008465	Aspergillus flavus	35.78	5.00e-58	216.00
IUUC-Afu-009056	Aspergillus fumigatus	34.02	3.00e-56	209.00
IUUC-Ani-009235	Aspergillus nidulans	26.48	1.00e-18	84.30
IUUC-Ang-009677	Aspergillus niger	33.63	3.00e-55	206.00
IUUC-Aor-010017	Aspergillus oryzae	35.76	2.00e-58	217.00
IUUC-Ate-010259	Aspergillus terreus	48.23	2.00e-43	167.00
IUUC-Ame-010934	Astyanax mexicanus	26.96	2.00e-27	114.00
IUUC-Bgr-012074	Blumeria graminis	30.70	1.00e-45	175.00
IUUC-Bta-013329	Bos taurus	30.57	3.00e-36	143.00
IUUC-Bci-013704	Botrytis cinerea	33.12	2.00e-53	200.00
IUUC-Bdi-014672	Brachypodium distachyon	41.10	1.00e-13	67.00
IUUC-Bol-015807	Brassica oleracea	31.51	4.00e-04	36.20
IUUC-Bra-017894	Brassica rapa	40.00	1.00e-14	70.90
IUUC-Cel-018428	Caenorhabditis elegans	31.33	5.00e-23	99.40
IUUC-Cja-019720	Callithrix jacchus	30.99	7.00e-37	145.00
IUUC-Cfa-020319	Canis familiaris	31.13	5.00e-36	142.00
IUUC-Cpo-021652	Cavia porcellus	32.06	2.00e-36	144.00
IUUC-Cre-022749	Chlamydomonas reinhardtii	40.26	4.00e-14	68.90
IUUC-Csa-023560	Chlorocebus sabaeus	31.43	1.00e-36	144.00
IUUC-Cin-025502	Ciona intestinalis	29.05	1.00e-30	124.00
IUUC-Csv-026302	Ciona savignyi	31.27	2.00e-33	134.00
IUUC-Cgl-026541	Colletotrichum gloeosporioides	27.94	2.00e-11	60.10
IUUC-Cne-027055	Cryptococcus neoformans	41.61	4.00e-35	139.00
IUUC-Dre-027714	Danio rerio	31.45	3.00e-34	136.00
IUUC-Dno-029232	Dasypus novemcinctus	37.84	1.00e-33	133.00
IUUC-Dor-030996	Dipodomys ordii	42.86	1.00e-15	74.30
IUUC-Dse-031359	Dothistroma septosporum	35.11	3.00e-57	213.00
IUUC-Dme-031992	Drosophila melanogaster	47.26	4.00e-36	142.00
IUUC-Eca-034116	Equus caballus	30.50	2.00e-35	140.00
IUUC-Eeu-035143	Erinaceus europaeus	29.35	2.00e-20	90.50
IUUC-Fca-035960	Felis catus	31.13	4.00e-36	142.00
IUUC-Fal-037039	Ficedula albicollis	35.47	1.00e-25	107.00
IUUC-Fox-037882	Fusarium oxysporum	33.33	1.00e-43	167.00
IUUC-Fso-038318	Fusarium solani	33.75	3.00e-48	183.00
IUUC-Gmo-038905	Gadus morhua	29.25	3.00e-32	130.00
IUUC-Ggr-039857	Gaeumannomyces graminis	40.74	8.00e-23	99.00
IUUC-Gga-041216	Gallus gallus	44.29	1.00e-32	130.00
IUUC-Gac-041987	Gasterosteus aculeatus	29.60	2.00e-34	137.00
IUUC-Gma-044312	Glycine max	41.79	8.00e-14	67.80
IUUC-Ggo-044930	Gorilla gorilla	25.79	1.00e-21	94.40
IUUC-Hsa-045876	Homo sapiens	31.43	1.00e-36	144.00
IUUC-Hvu-047088	Hordeum vulgare	39.47	1.00e-13	67.00
IUUC-Itr-048476	Ictidomys tridecemlineatus	38.20	3.00e-29	119.00
IUUC-Lch-049886	Latimeria chalumnae	37.63	2.00e-33	134.00
IUUC-Lpe-051199	Leersia perrieri	38.16	2.00e-13	66.60
IUUC-Loc-052556	Lepisosteus oculatus	40.88	2.00e-30	124.00
IUUC-Lma-053002	Leptosphaeria maculans	30.99	2.00e-49	187.00
IUUC-Laf-054516	Loxodonta africana	31.45	3.00e-36	142.00
IUUC-Mcc-054761	Macaca mulatta	37.37	4.00e-35	139.00
IUUC-Mor-057048	Magnaporthe oryzae	31.60	1.00e-40	158.00
IUUC-Mpo-057598	Magnaporthe poae	44.95	1.00e-19	86.70
IUUC-Mtr-058131	Medicago truncatula	41.79	2.00e-13	66.20
IUUC-Mla-059009	Melampsora laricipopulina	50.68	9.00e-41	157.00
IUUC-Mga-060199	Meleagris gallopavo	44.14	9.00e-24	100.00
IUUC-Mvi-060382	Microbotryum violaceum	41.61	1.00e-34	138.00
IUUC-Mmr-061671	Microcebus murinus	30.23	1.00e-34	137.00
IUUC-Mdo-062228	Monodelphis domestica	31.11	3.00e-35	139.00
IUUC-Mmu-064416	Mus musculus	31.21	2.00e-36	144.00
IUUC-Mac-064807	Musa acuminata	45.59	1.00e-14	70.50
IUUC-Mpu-066455	Mustela putorius furo	31.13	2.00e-36	143.00
IUUC-Mlu-067325	Myotis lucifugus	37.29	1.00e-29	120.00
IUUC-Nfi-068566	Neosartorya fischeri	33.43	1.00e-55	207.00
IUUC-Ncr-068687	Neurospora crassa	31.08	7.00e-43	165.00
IUUC-Nle-069937	Nomascus leucogenys	31.43	1.00e-36	144.00
IUUC-Opr-070321	Ochotona princeps	37.74	2.00e-20	90.50
IUUC-Ont-072636	Oreochromis niloticus	30.43	7.00e-34	135.00
IUUC-Oan-072915	Ornithorhynchus anatinus	35.19	3.00e-24	102.00
IUUC-Ocu-074547	Oryctolagus cuniculus	30.53	4.00e-33	132.00
IUUC-Oba-075269	Oryza barthii	42.47	3.00e-14	69.30
IUUC-Obr-076081	Oryza brachyantha	41.10	2.00e-14	69.70
IUUC-Ogl-077011	Oryza glaberrima	42.47	3.00e-14	69.30
IUUC-Ogu-078667	Oryza glumaepatula	42.47	3.00e-14	69.70
IUUC-Oin-079153	Oryza indica	42.47	3.00e-14	69.30
IUUC-Olo-080344	Oryza longistaminata	38.30	2.00e-11	60.10
IUUC-Ome-081805	Oryza meridionalis	42.47	3.00e-14	70.10
IUUC-Oni-082783	Oryza nivara	42.47	5.00e-14	68.60
IUUC-Opu-083247	Oryza punctata	41.10	5.00e-14	68.60
IUUC-Oru-085262	Oryza rufipogon	42.47	3.00e-14	69.30
IUUC-Osa-086250	Oryza sativa	42.47	2.00e-14	69.70
IUUC-Ola-086780	Oryzias latipes	31.01	7.00e-35	138.00
IUUC-Olu-087653	Ostreococcus lucimarinus	33.33	9.00e-10	54.30
IUUC-Oga-088012	Otolemur garnettii	31.23	4.00e-35	139.00
IUUC-Oar-090274	Ovis aries	28.03	4.00e-27	112.00
IUUC-Ptr-090780	Pan troglodytes	31.43	1.00e-36	144.00
IUUC-Pan-091815	Papio anubis	32.37	3.00e-21	92.80
IUUC-Psi-093883	Pelodiscus sinensis	31.13	4.00e-36	142.00
IUUC-Pma-094717	Petromyzon marinus	45.95	1.00e-15	73.90
IUUC-Pno-094958	Phaeosphaeria nodorum	37.94	1.00e-56	211.00
IUUC-Ppa-095445	Physcomitrella patens	47.46	5.00e-14	68.60
IUUC-Pfo-096051	Poecilia formosa	43.80	8.00e-33	131.00
IUUC-Pab-097609	Pongo abelii	37.37	7.00e-35	138.00
IUUC-Pop-099332	Populus trichocarpa	44.59	7.00e-14	66.60
IUUC-Pca-101094	Procavia capensis	29.18	6.00e-28	115.00
IUUC-Ppe-101481	Prunus persica	46.27	3.00e-14	68.90
IUUC-Pva-103219	Pteropus vampyrus	30.97	7.00e-34	135.00
IUUC-Pgr-103557	Puccinia graminis	48.68	1.00e-42	164.00
IUUC-Ptt-103719	Puccinia triticina	47.95	3.00e-42	163.00
IUUC-Pte-104301	Pyrenophora teres	45.38	2.00e-35	140.00
IUUC-Pyt-104486	Pyrenophora triticirepentis	45.38	1.00e-35	141.00
IUUC-Rno-105846	Rattus norvegicus	31.45	8.00e-37	145.00
IUUC-Sce-106405	Saccharomyces cerevisiae	42.63	3.00e-62	229.00
IUUC-Sha-107594	Sarcophilus harrisii	36.48	3.00e-25	105.00
IUUC-Sja-107951	Schizosaccharomyces japonicus	34.09	6.00e-44	169.00
IUUC-Spo-108137	Schizosaccharomyces pombe	36.27	7.00e-52	195.00
IUUC-Ssl-108503	Sclerotinia sclerotiorum	34.06	6.00e-57	212.00
IUUC-Smo-109621	Selaginella moellendorffii	34.65	2.00e-16	75.90
IUUC-Sit-110672	Setaria italica	39.73	1.00e-13	67.40
IUUC-Sly-111744	Solanum lycopersicum	38.24	2.00e-13	66.20
IUUC-Stu-112343	Solanum tuberosum	38.24	2.00e-13	66.20
IUUC-Sar-113298	Sorex araneus	36.87	6.00e-34	135.00
IUUC-Sbi-113918	Sorghum bicolor	42.47	2.00e-14	70.10
IUUC-Sre-114991	Sporisorium reilianum	45.52	2.00e-34	137.00
IUUC-Ssc-116152	Sus scrofa	36.05	2.00e-27	112.00
IUUC-Tgu-116452	Taeniopygia guttata	31.43	9.00e-33	131.00
IUUC-Tru-118621	Takifugu rubripes	29.32	1.00e-32	130.00
IUUC-Tsy-119500	Tarsius syrichta	37.30	5.00e-34	135.00
IUUC-Tni-120454	Tetraodon nigroviridis	25.93	4.00e-21	92.80
IUUC-Tca-121192	Theobroma cacao	38.36	2.00e-15	73.20
IUUC-Tre-122011	Trichoderma reesei	31.60	2.00e-45	174.00
IUUC-Tvi-122317	Trichoderma virens	32.11	2.00e-46	177.00
IUUC-Tae-123854	Triticum aestivum	39.47	4.00e-14	68.90
IUUC-Tur-126556	Triticum urartu	39.47	7.00e-14	68.20
IUUC-Tme-127135	Tuber melanosporum	37.66	6.00e-48	182.00
IUUC-Tbe-127287	Tupaia belangeri	30.48	2.00e-26	110.00
IUUC-Ttr-128864	Tursiops truncatus	30.00	2.00e-35	140.00
IUUC-Uma-129539	Ustilago maydis	50.39	2.00e-37	147.00
IUUC-Vda-129713	Verticillium dahliae	31.25	4.00e-35	139.00
IUUC-Vpa-130462	Vicugna pacos	29.11	1.00e-27	114.00
IUUC-Vvi-130988	Vitis vinifera	38.67	3.00e-14	68.90
IUUC-Xtr-131830	Xenopus tropicalis	35.18	4.00e-34	135.00
IUUC-Xma-133952	Xiphophorus maculatus	43.70	1.00e-32	131.00
IUUC-Yli-134433	Yarrowia lipolytica	37.58	4.00e-57	213.00
IUUC-Zma-134867	Zea mays	43.84	9.00e-15	71.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence