iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017932

Ensembl Protein ID

Bra030602.1-P

UniProt Accession

M4EP82; M4EP82_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra030602	Bra030602.1	Bra030602.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	41.41	6.00e-82	299.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSNQRKRPNG EREEDDEEDD AEGIGQWERA YVDDRSWEAL QEDESGLLRP IDTSAIYHAQ 60
YRRRLRMLSA AAAGTRIQKG LIRYLYIVID FSRAAAETDF RPSRMAIMAK HVEAFIREFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTAATC AGAGAAAGAG ACCCAACGGA GAAAGAGAAG AAGACGACGA GGAGGACGAT 60
GCGGAAGGTA TCGGCCAGTG GGAGAGAGCT TACGTTGACG ACAGATCCTG GGAGGCCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR001841--Znf_RING

PROSITE

PS50234--VWFA
PS50089--ZF_RING_2

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	73.51	2.00e-112	399.00
IUUC-Aml-002041	Ailuropoda melanoleuca	41.91	2.00e-77	282.00
IUUC-Atr-003056	Amborella trichopoda	71.88	3.00e-136	477.00
IUUC-Apl-003464	Anas platyrhynchos	41.83	7.00e-71	260.00
IUUC-Aca-004745	Anolis carolinensis	42.69	4.00e-76	278.00
IUUC-Aly-005559	Arabidopsis lyrata	93.13	0.00e+00	731.00
IUUC-Ath-007556	Arabidopsis thaliana	92.65	0.00e+00	728.00
IUUC-Ago-007851	Ashbya gossypii	41.41	3.00e-82	298.00
IUUC-Acl-008100	Aspergillus clavatus	37.16	4.00e-77	281.00
IUUC-Afl-008649	Aspergillus flavus	39.68	3.00e-11	59.30
IUUC-Afu-009066	Aspergillus fumigatus	37.16	2.00e-79	289.00
IUUC-Ani-009372	Aspergillus nidulans	37.03	5.00e-75	274.00
IUUC-Ang-009726	Aspergillus niger	36.67	3.00e-80	291.00
IUUC-Aor-010135	Aspergillus oryzae	37.65	5.00e-77	281.00
IUUC-Ate-010399	Aspergillus terreus	33.33	1.00e-20	92.80
IUUC-Ame-011618	Astyanax mexicanus	41.71	6.00e-86	310.00
IUUC-Bgr-012154	Blumeria graminis	37.35	5.00e-75	274.00
IUUC-Bta-012353	Bos taurus	41.65	1.00e-80	293.00
IUUC-Bci-013932	Botrytis cinerea	38.65	3.00e-80	291.00
IUUC-Bdi-014391	Brachypodium distachyon	74.29	7.00e-155	540.00
IUUC-Bol-015128	Brassica oleracea	99.05	0.00e+00	784.00
IUUC-Cel-018649	Caenorhabditis elegans	38.92	2.00e-67	249.00
IUUC-Cja-018776	Callithrix jacchus	41.90	1.00e-77	283.00
IUUC-Cfa-020584	Canis familiaris	42.39	1.00e-78	286.00
IUUC-Cpo-021300	Cavia porcellus	41.90	1.00e-77	282.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	47.95	6.00e-92	330.00
IUUC-Csa-024092	Chlorocebus sabaeus	42.14	9.00e-78	283.00
IUUC-Cho-024919	Choloepus hoffmanni	41.23	4.00e-36	144.00
IUUC-Cin-025386	Ciona intestinalis	40.55	7.00e-81	293.00
IUUC-Csv-026295	Ciona savignyi	39.45	4.00e-77	281.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	37.12	9.00e-72	263.00
IUUC-Cne-026956	Cryptococcus neoformans	36.73	3.00e-76	278.00
IUUC-Cme-027150	Cyanidioschyzon merolae	33.06	3.00e-50	192.00
IUUC-Dre-027962	Danio rerio	42.00	6.00e-89	320.00
IUUC-Dno-029979	Dasypus novemcinctus	43.87	6.00e-68	250.00
IUUC-Dse-031405	Dothistroma septosporum	41.76	2.00e-79	289.00
IUUC-Dme-031710	Drosophila melanogaster	38.21	7.00e-82	297.00
IUUC-Ete-032631	Echinops telfairi	38.42	2.00e-70	259.00
IUUC-Eca-034054	Equus caballus	42.93	3.00e-78	285.00
IUUC-Fca-035724	Felis catus	39.90	3.00e-73	268.00
IUUC-Fal-036987	Ficedula albicollis	41.63	2.00e-85	309.00
IUUC-Fox-037692	Fusarium oxysporum	39.23	1.00e-82	299.00
IUUC-Fso-038442	Fusarium solani	41.69	1.00e-84	306.00
IUUC-Gmo-039273	Gadus morhua	42.42	2.00e-86	311.00
IUUC-Ggr-040009	Gaeumannomyces graminis	40.77	7.00e-65	241.00
IUUC-Gga-041089	Gallus gallus	41.41	2.00e-85	308.00
IUUC-Gac-041978	Gasterosteus aculeatus	40.84	8.00e-81	293.00
IUUC-Gma-043371	Glycine max	75.12	0.00e+00	626.00
IUUC-Hsa-046001	Homo sapiens	42.14	3.00e-77	281.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	42.14	7.00e-85	306.00
IUUC-Kpa-049235	Komagataella pastoris	40.79	3.00e-79	288.00
IUUC-Lch-049926	Latimeria chalumnae	42.17	2.00e-81	295.00
IUUC-Lpe-051352	Leersia perrieri	74.55	3.00e-149	521.00
IUUC-Loc-051987	Lepisosteus oculatus	39.80	1.00e-83	303.00
IUUC-Lma-053171	Leptosphaeria maculans	34.60	3.00e-65	243.00
IUUC-Laf-054372	Loxodonta africana	41.63	3.00e-81	295.00
IUUC-Mcc-055108	Macaca mulatta	42.14	1.00e-77	283.00
IUUC-Mor-056990	Magnaporthe oryzae	37.89	5.00e-78	284.00
IUUC-Mtr-058401	Medicago truncatula	76.19	0.00e+00	627.00
IUUC-Mla-059186	Melampsora laricipopulina	39.71	5.00e-85	307.00
IUUC-Mvi-060262	Microbotryum violaceum	39.56	2.00e-85	309.00
IUUC-Mmr-061688	Microcebus murinus	38.68	1.00e-67	249.00
IUUC-Mdo-062154	Monodelphis domestica	42.14	3.00e-82	298.00
IUUC-Mmu-064232	Mus musculus	41.19	1.00e-75	276.00
IUUC-Mac-065091	Musa acuminata	73.07	8.00e-164	569.00
IUUC-Mpu-066747	Mustela putorius furo	38.48	2.00e-63	236.00
IUUC-Mlu-067799	Myotis lucifugus	39.34	8.00e-66	243.00
IUUC-Nfi-068371	Neosartorya fischeri	37.50	2.00e-13	68.20
IUUC-Ncr-068704	Neurospora crassa	39.00	1.00e-79	290.00
IUUC-Nle-069054	Nomascus leucogenys	41.90	1.00e-76	280.00
IUUC-Ont-071624	Oreochromis niloticus	42.17	1.00e-84	306.00
IUUC-Oan-072898	Ornithorhynchus anatinus	40.93	1.00e-80	293.00
IUUC-Ocu-074289	Oryctolagus cuniculus	39.68	7.00e-60	223.00
IUUC-Oba-075985	Oryza barthii	72.73	9.00e-146	509.00
IUUC-Obr-076887	Oryza brachyantha	72.73	1.00e-152	532.00
IUUC-Ogl-077823	Oryza glaberrima	72.73	9.00e-146	509.00
IUUC-Ogu-078412	Oryza glumaepatula	75.93	5.00e-134	471.00
IUUC-Oin-079569	Oryza indica	71.19	3.00e-111	395.00
IUUC-Olo-080249	Oryza longistaminata	75.09	4.00e-111	394.00
IUUC-Ome-081240	Oryza meridionalis	75.62	6.00e-133	467.00
IUUC-Oni-082152	Oryza nivara	75.93	3.00e-133	468.00
IUUC-Opu-084011	Oryza punctata	73.25	1.00e-146	512.00
IUUC-Oru-084719	Oryza rufipogon	73.14	3.00e-137	481.00
IUUC-Osa-085286	Oryza sativa	72.47	1.00e-145	509.00
IUUC-Ola-086525	Oryzias latipes	38.40	1.00e-69	256.00
IUUC-Olu-087876	Ostreococcus lucimarinus	45.69	1.00e-86	313.00
IUUC-Oga-088125	Otolemur garnettii	40.65	7.00e-79	287.00
IUUC-Oar-089701	Ovis aries	41.65	1.00e-80	292.00
IUUC-Ptr-091218	Pan troglodytes	41.90	2.00e-77	282.00
IUUC-Pan-091755	Papio anubis	42.14	1.00e-77	283.00
IUUC-Psi-094061	Pelodiscus sinensis	41.90	3.00e-83	301.00
IUUC-Pma-094430	Petromyzon marinus	41.90	3.00e-56	211.00
IUUC-Pno-094900	Phaeosphaeria nodorum	30.48	3.00e-40	159.00
IUUC-Ppa-095895	Physcomitrella patens	64.34	1.00e-153	535.00
IUUC-Pfo-096297	Poecilia formosa	41.90	8.00e-56	209.00
IUUC-Pab-097717	Pongo abelii	42.14	1.00e-77	283.00
IUUC-Pop-098938	Populus trichocarpa	79.90	7.00e-176	609.00
IUUC-Pca-100389	Procavia capensis	38.75	7.00e-63	233.00
IUUC-Ppe-102045	Prunus persica	77.61	2.00e-171	594.00
IUUC-Pva-102357	Pteropus vampyrus	45.67	4.00e-35	140.00
IUUC-Pgr-103399	Puccinia graminis	40.10	3.00e-82	298.00
IUUC-Ptt-103872	Puccinia triticina	40.43	2.00e-83	302.00
IUUC-Pte-104092	Pyrenophora teres	39.10	1.00e-63	236.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	39.56	3.00e-64	239.00
IUUC-Rno-105515	Rattus norvegicus	41.71	3.00e-80	291.00
IUUC-Sce-106434	Saccharomyces cerevisiae	41.67	3.00e-85	308.00
IUUC-Sha-106808	Sarcophilus harrisii	41.65	3.00e-80	291.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	40.25	1.00e-76	280.00
IUUC-Spo-108044	Schizosaccharomyces pombe	40.75	2.00e-84	305.00
IUUC-Smo-109581	Selaginella moellendorffii	59.84	9.00e-138	482.00
IUUC-Sit-110704	Setaria italica	74.03	3.00e-153	534.00
IUUC-Sly-110990	Solanum lycopersicum	75.79	3.00e-139	487.00
IUUC-Stu-112542	Solanum tuberosum	73.87	3.00e-92	330.00
IUUC-Sar-113766	Sorex araneus	41.49	8.00e-66	243.00
IUUC-Sbi-114016	Sorghum bicolor	74.55	1.00e-153	536.00
IUUC-Sre-115099	Sporisorium reilianum	37.20	1.00e-77	283.00
IUUC-Ssc-115277	Sus scrofa	42.39	3.00e-75	275.00
IUUC-Tgu-117343	Taeniopygia guttata	41.77	1.00e-85	309.00
IUUC-Tru-118397	Takifugu rubripes	41.90	2.00e-81	295.00
IUUC-Tni-120272	Tetraodon nigroviridis	41.94	1.00e-83	303.00
IUUC-Tca-121514	Theobroma cacao	79.90	0.00e+00	645.00
IUUC-Tre-121990	Trichoderma reesei	38.36	2.00e-78	286.00
IUUC-Tvi-122504	Trichoderma virens	41.76	2.00e-77	282.00
IUUC-Tae-123153	Triticum aestivum	74.81	6.00e-154	536.00
IUUC-Tur-126693	Triticum urartu	77.17	2.00e-118	418.00
IUUC-Tme-127011	Tuber melanosporum	40.44	6.00e-81	294.00
IUUC-Tbe-127939	Tupaia belangeri	41.90	1.00e-76	280.00
IUUC-Ttr-128889	Tursiops truncatus	35.91	5.00e-65	241.00
IUUC-Uma-129450	Ustilago maydis	36.28	4.00e-78	285.00
IUUC-Vda-129919	Verticillium dahliae	37.98	1.00e-70	259.00
IUUC-Vvi-130928	Vitis vinifera	78.54	3.00e-179	620.00
IUUC-Xtr-131891	Xenopus tropicalis	37.31	2.00e-70	258.00
IUUC-Xma-133260	Xiphophorus maculatus	41.11	6.00e-55	206.00
IUUC-Yli-134578	Yarrowia lipolytica	38.64	5.00e-78	284.00
IUUC-Zma-135427	Zea mays	73.77	3.00e-152	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence