iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d029782	Zm00001d029782_T012	Zm00001d029782_T012
Zm00001d029782	Zm00001d029782_T002	Zm00001d029782_T002
Zm00001d029782	Zm00001d029782_T001	Zm00001d029782_T001
Zm00001d029782	Zm00001d029782_T003	Zm00001d029782_T003
Zm00001d029782	Zm00001d029782_T004	Zm00001d029782_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.00e-07	32.9	554	588
ULD/UDP/UBQ/UBQ_PIM	2.80e-21	77.2	27	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMGF.dreealqaLraannnleaAveyLl 39
           +l ql+eMGF d+ e++qaL+a+ +n+ aAve+Ll
   Q: 554  QLTQLQEMGFiDTAENIQALLATAGNVHAAVERLL 588
           789*******************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvv 71
           +l++++ +g++f+++ +   tv  +Ke +a +++vp+ qq+LIy+G+iLkD++tL+++g+++++++hlv 
   Q: 27   TLHIRCANGSKFTVQTDLGATVGGFKEVVAGSCDVPAPQQRLIYKGRILKDEQTLESYGVETDHTIHLVR 96
           699*****************************************************************96 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MASGGEGAGS GESPPAASVE AAAGEATLHI RCANGSKFTV QTDLGATVGG FKEVVAGSCD 60
VPAPQQRLIY KGRILKDEQT LESYGVETDH TIHLVRGVAP PAASSAPAAA SSLASSTLSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCCAAAGA TTCTTGTCTG AGCCTATTTA GACTGGAACA TGTAGTTCTT GTGGCCTGCC 60
CAATTCCCAG TGCTATTCGC GCCTAGAACC TTCTTCACAT GGCCATCACG CGTCCAATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007963	Ashbya gossypii	30.22	2.00e-14	72.40
IUUC-Afl-008403	Aspergillus flavus	31.51	1.00e-16	80.90
IUUC-Ani-009418	Aspergillus nidulans	44.44	2.00e-13	70.10
IUUC-Ang-009826	Aspergillus niger	29.74	6.00e-16	77.80
IUUC-Aor-010091	Aspergillus oryzae	31.51	1.00e-16	80.90
IUUC-Ate-010419	Aspergillus terreus	29.60	9.00e-16	77.80
IUUC-Bgr-012188	Blumeria graminis	25.76	2.00e-12	66.60
IUUC-Dno-029892	Dasypus novemcinctus	52.94	3.00e-34	139.00
IUUC-Eeu-034727	Erinaceus europaeus	52.50	5.00e-34	138.00
IUUC-Nfi-068487	Neosartorya fischeri	26.48	9.00e-15	74.30
IUUC-Oba-075114	Oryza barthii	83.71	1.00e-117	416.00
IUUC-Ogl-077147	Oryza glaberrima	83.71	1.00e-117	416.00
IUUC-Ogu-078322	Oryza glumaepatula	83.71	5.00e-118	417.00
IUUC-Oin-080117	Oryza indica	83.71	1.00e-117	416.00
IUUC-Olo-080375	Oryza longistaminata	79.54	2.00e-75	276.00
IUUC-Ome-081155	Oryza meridionalis	82.87	3.00e-113	401.00
IUUC-Oni-082060	Oryza nivara	83.71	1.00e-117	416.00
IUUC-Opu-083339	Oryza punctata	83.50	2.00e-102	365.00
IUUC-Oru-084808	Oryza rufipogon	83.71	1.00e-117	416.00
IUUC-Osa-085932	Oryza sativa	83.71	1.00e-117	416.00
IUUC-Pno-094908	Phaeosphaeria nodorum	31.19	1.00e-13	69.70
IUUC-Ppa-095193	Physcomitrella patens	80.77	6.00e-58	218.00
IUUC-Pfo-096638	Poecilia formosa	41.00	4.00e-43	168.00
IUUC-Spo-108223	Schizosaccharomyces pombe	28.29	1.00e-16	79.70
IUUC-Sly-111240	Solanum lycopersicum	50.25	7.00e-117	413.00
IUUC-Tae-125598	Triticum aestivum	85.17	2.00e-108	385.00
IUUC-Vpa-130546	Vicugna pacos	54.72	3.00e-31	129.00
IUUC-Xma-134155	Xiphophorus maculatus	40.38	3.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence