iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090827

UUCD1 version

UUC-PaT-00761

Ensembl Protein ID

ENSPTRP00000038271.1

UniProt Accession

H2QZ23; H2QZ23_PANTR

Genbank Protein ID

JAA09546.1; JAA16552.1; JAA22894.1; JAA42991.1

Protein Name

Ring finger protein 113A

Genbank Nucleotide ID

AACZ03145853; GABF01005593; GABD01010206; GABE01001748

Gene Name

RNF113A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000022231.1	ENSPTRT00000041434.1	ENSPTRP00000038271.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	99.71	5.00e-176	614.00	IUUC-Hsa-047000
E3 activity/RING/RING	43.44	3.00e-48	189.00	IUUC-Osa-086166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAEQLSPGKA VDQVCTFLFK KPGRKGAAGR RKRPACDPEP GESGSSSDEG CTVVRPEKKR 60
VTHNPMIQKT RDSGKQKAAY GDLSSEEEEE NEPESLGVVY KSTRSAKPVG PEDMGATAVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAGC AGCTTTCTCC AGGAAAGGCG GTGGATCAGG TGTGCACCTT CCTTTTCAAA 60
AAGCCTGGGC GGAAAGGGGC TGCTGGACGC AGAAAGCGCC CGGCCTGCGA CCCAGAGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing

KEGG

ptr:473762

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000118	Aegilops tauschii	43.51	3.00e-50	192.00
IUUC-Aml-002002	Ailuropoda melanoleuca	88.25	6.00e-168	583.00
IUUC-Apl-003440	Anas platyrhynchos	83.27	3.00e-120	424.00
IUUC-Aca-004421	Anolis carolinensis	80.33	3.00e-132	464.00
IUUC-Aly-006121	Arabidopsis lyrata	44.64	2.00e-53	202.00
IUUC-Ath-007493	Arabidopsis thaliana	45.06	7.00e-54	204.00
IUUC-Ago-007731	Ashbya gossypii	45.38	2.00e-29	122.00
IUUC-Acl-008186	Aspergillus clavatus	43.92	3.00e-43	168.00
IUUC-Afl-008484	Aspergillus flavus	39.30	7.00e-40	157.00
IUUC-Afu-008971	Aspergillus fumigatus	43.92	3.00e-43	168.00
IUUC-Ani-009499	Aspergillus nidulans	45.51	1.00e-41	163.00
IUUC-Ang-009717	Aspergillus niger	39.00	2.00e-42	166.00
IUUC-Aor-009898	Aspergillus oryzae	39.30	7.00e-40	157.00
IUUC-Ame-011925	Astyanax mexicanus	75.54	2.00e-123	435.00
IUUC-Bgr-012259	Blumeria graminis	41.50	1.00e-42	166.00
IUUC-Bta-012490	Bos taurus	92.13	4.00e-177	613.00
IUUC-Bci-013882	Botrytis cinerea	41.53	3.00e-40	159.00
IUUC-Bdi-014084	Brachypodium distachyon	44.05	5.00e-50	191.00
IUUC-Cel-018698	Caenorhabditis elegans	47.55	4.00e-68	251.00
IUUC-Cja-019434	Callithrix jacchus	96.07	1.00e-161	561.00
IUUC-Cfa-020902	Canis familiaris	90.52	2.00e-169	588.00
IUUC-Cre-022885	Chlamydomonas reinhardtii	38.08	2.00e-41	162.00
IUUC-Cho-024587	Choloepus hoffmanni	89.55	5.00e-131	459.00
IUUC-Cin-025328	Ciona intestinalis	69.83	4.00e-105	374.00
IUUC-Csv-026148	Ciona savignyi	70.83	2.00e-104	372.00
IUUC-Cgl-026700	Colletotrichum gloeosporioides	41.51	4.00e-34	138.00
IUUC-Cne-026816	Cryptococcus neoformans	37.45	4.00e-43	168.00
IUUC-Dre-027744	Danio rerio	69.23	2.00e-124	437.00
IUUC-Dse-031155	Dothistroma septosporum	48.25	4.00e-37	148.00
IUUC-Dme-031788	Drosophila melanogaster	58.20	6.00e-98	350.00
IUUC-Ete-033013	Echinops telfairi	88.34	1.00e-146	512.00
IUUC-Eca-033460	Equus caballus	92.73	1.00e-169	588.00
IUUC-Fca-035525	Felis catus	88.95	2.00e-167	581.00
IUUC-Fal-037206	Ficedula albicollis	82.33	1.00e-128	452.00
IUUC-Fox-037959	Fusarium oxysporum	31.31	7.00e-37	147.00
IUUC-Fso-038348	Fusarium solani	32.05	8.00e-41	160.00
IUUC-Gmo-038718	Gadus morhua	67.40	2.00e-120	425.00
IUUC-Ggr-040114	Gaeumannomyces graminis	43.46	3.00e-42	165.00
IUUC-Gga-041037	Gallus gallus	79.51	1.00e-133	468.00
IUUC-Gac-042103	Gasterosteus aculeatus	67.83	1.00e-124	439.00
IUUC-Gma-043581	Glycine max	45.61	2.00e-56	212.00
IUUC-Ggo-044906	Gorilla gorilla	99.71	2.00e-177	614.00
IUUC-Hsa-047000	Homo sapiens	99.71	2.00e-177	614.00
IUUC-Hvu-047578	Hordeum vulgare	45.45	3.00e-23	99.80
IUUC-Itr-048102	Ictidomys tridecemlineatus	93.02	3.00e-176	610.00
IUUC-Kpa-049320	Komagataella pastoris	40.80	5.00e-35	140.00
IUUC-Lch-050488	Latimeria chalumnae	72.50	4.00e-134	470.00
IUUC-Lpe-051156	Leersia perrieri	42.45	9.00e-47	180.00
IUUC-Loc-052670	Lepisosteus oculatus	77.49	1.00e-128	452.00
IUUC-Lma-053326	Leptosphaeria maculans	42.77	2.00e-38	154.00
IUUC-Laf-053570	Loxodonta africana	91.27	7.00e-172	596.00
IUUC-Mcc-055375	Macaca mulatta	97.87	7.00e-167	579.00
IUUC-Meu-056191	Macropus eugenii	76.95	8.00e-141	493.00
IUUC-Mor-057193	Magnaporthe oryzae	39.30	5.00e-38	151.00
IUUC-Mpo-057603	Magnaporthe poae	42.25	5.00e-40	157.00
IUUC-Mtr-058182	Medicago truncatula	48.89	6.00e-56	211.00
IUUC-Mga-059281	Meleagris gallopavo	82.05	5.00e-133	466.00
IUUC-Mvi-060317	Microbotryum violaceum	42.39	1.00e-37	150.00
IUUC-Mmr-061744	Microcebus murinus	94.78	2.00e-169	587.00
IUUC-Mmu-063426	Mus musculus	91.07	5.00e-170	590.00
IUUC-Mac-065265	Musa acuminata	43.62	2.00e-47	182.00
IUUC-Mpu-066867	Mustela putorius furo	89.05	6.00e-165	573.00
IUUC-Mlu-067828	Myotis lucifugus	87.36	5.00e-160	556.00
IUUC-Nfi-068575	Neosartorya fischeri	41.80	2.00e-39	155.00
IUUC-Ncr-068828	Neurospora crassa	41.94	3.00e-39	155.00
IUUC-Nle-069137	Nomascus leucogenys	98.83	7.00e-176	609.00
IUUC-Ont-071497	Oreochromis niloticus	71.21	4.00e-130	457.00
IUUC-Oan-073182	Ornithorhynchus anatinus	75.62	4.00e-127	447.00
IUUC-Ocu-073949	Oryctolagus cuniculus	90.41	7.00e-166	576.00
IUUC-Oba-075693	Oryza barthii	42.62	2.00e-46	179.00
IUUC-Obr-076128	Oryza brachyantha	42.00	5.00e-46	177.00
IUUC-Ogl-077323	Oryza glaberrima	42.62	2.00e-46	179.00
IUUC-Ogu-078766	Oryza glumaepatula	42.62	2.00e-46	179.00
IUUC-Oin-080054	Oryza indica	42.62	2.00e-46	179.00
IUUC-Olo-080325	Oryza longistaminata	42.66	1.00e-38	154.00
IUUC-Ome-081331	Oryza meridionalis	42.45	8.00e-47	180.00
IUUC-Oni-082786	Oryza nivara	42.62	2.00e-46	179.00
IUUC-Opu-083855	Oryza punctata	42.62	8.00e-47	180.00
IUUC-Oru-084304	Oryza rufipogon	42.62	2.00e-46	179.00
IUUC-Osa-086166	Oryza sativa	42.62	2.00e-46	179.00
IUUC-Ola-086368	Oryzias latipes	65.55	1.00e-120	426.00
IUUC-Olu-087624	Ostreococcus lucimarinus	40.98	2.00e-46	178.00
IUUC-Oga-088080	Otolemur garnettii	91.57	7.00e-169	586.00
IUUC-Oar-089934	Ovis aries	93.62	6.00e-172	596.00
IUUC-Pan-092245	Papio anubis	97.87	7.00e-167	579.00
IUUC-Psi-093790	Pelodiscus sinensis	84.29	9.00e-141	492.00
IUUC-Pma-094326	Petromyzon marinus	68.33	7.00e-122	429.00
IUUC-Pno-095057	Phaeosphaeria nodorum	43.31	1.00e-37	149.00
IUUC-Ppa-095690	Physcomitrella patens	45.53	1.00e-55	209.00
IUUC-Pfo-097026	Poecilia formosa	71.80	4.00e-127	447.00
IUUC-Pab-098689	Pongo abelii	98.83	6.00e-176	609.00
IUUC-Pca-100687	Procavia capensis	89.80	2.00e-152	531.00
IUUC-Ppe-101155	Prunus persica	46.06	2.00e-55	209.00
IUUC-Pgr-103440	Puccinia graminis	41.26	7.00e-43	167.00
IUUC-Pte-104377	Pyrenophora teres	45.95	5.00e-39	154.00
IUUC-Pyt-104731	Pyrenophora triticirepentis	45.95	9.00e-39	153.00
IUUC-Rno-105967	Rattus norvegicus	87.72	1.00e-168	585.00
IUUC-Sce-106215	Saccharomyces cerevisiae	42.86	5.00e-36	144.00
IUUC-Sha-107587	Sarcophilus harrisii	74.07	1.00e-140	492.00
IUUC-Sja-107955	Schizosaccharomyces japonicus	43.75	2.00e-39	157.00
IUUC-Spo-108336	Schizosaccharomyces pombe	39.33	4.00e-34	139.00
IUUC-Smo-108930	Selaginella moellendorffii	42.28	1.00e-51	196.00
IUUC-Sit-110234	Setaria italica	42.68	2.00e-48	186.00
IUUC-Stu-111994	Solanum tuberosum	40.00	4.00e-57	214.00
IUUC-Sar-113374	Sorex araneus	90.38	4.00e-163	566.00
IUUC-Sbi-114766	Sorghum bicolor	43.46	1.00e-50	193.00
IUUC-Sre-115021	Sporisorium reilianum	40.09	3.00e-47	182.00
IUUC-Ssc-115474	Sus scrofa	92.73	1.00e-168	585.00
IUUC-Tgu-116649	Taeniopygia guttata	79.29	2.00e-142	498.00
IUUC-Tru-117701	Takifugu rubripes	68.32	1.00e-121	429.00
IUUC-Tni-120607	Tetraodon nigroviridis	68.40	5.00e-121	426.00
IUUC-Tca-121278	Theobroma cacao	45.93	2.00e-44	172.00
IUUC-Tre-122006	Trichoderma reesei	33.81	7.00e-33	134.00
IUUC-Tvi-122670	Trichoderma virens	39.34	1.00e-37	149.00
IUUC-Tae-122716	Triticum aestivum	45.13	3.00e-50	191.00
IUUC-Tur-126208	Triticum urartu	44.35	4.00e-50	191.00
IUUC-Tme-126908	Tuber melanosporum	42.68	6.00e-38	150.00
IUUC-Tbe-127394	Tupaia belangeri	93.60	2.00e-168	585.00
IUUC-Vpa-130519	Vicugna pacos	89.01	4.00e-144	503.00
IUUC-Vvi-131382	Vitis vinifera	46.46	1.00e-50	193.00
IUUC-Xtr-131923	Xenopus tropicalis	70.43	5.00e-132	463.00
IUUC-Xma-133705	Xiphophorus maculatus	69.44	2.00e-129	454.00
IUUC-Yli-134518	Yarrowia lipolytica	49.29	7.00e-35	140.00
IUUC-Zma-135029	Zea mays	45.07	5.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence