iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087449

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04054829

Gene Name

syvn1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000009383.1	ENSORLT00000011765.1	ENSORLP00000011764.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-09	37.8	291	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +g + lpC+H+fh +Cl  w       +++++CP+Cr
   Q: 291  CIICREEMVTGAKKLPCNHIFHSSCLRSW------FQRQQTCPTCR 330
           ********9*9******************......**********8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MVRAALVTAT SLALTGAVVA HAYLLKHQFY PTVVYLTKSS PSMAVLYIQA FVLVFLLGKF 60
MRKVFFGQLR AAEMEHLIER SWYAVTETCL AFTVFRDDFS PRFVALFTLL LFLKCFHWLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTACGAG CCGCCTTAGT AACTGCCACC AGTCTGGCGT TGACTGGAGC TGTAGTGGCT 60
CACGCTTATT TACTCAAACA CCAGTTTTAC CCAACTGTGG TCTACCTCAC GAAGAGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	37.04	3.00e-52	199.00
IUUC-Aml-001539	Ailuropoda melanoleuca	91.10	0.00e+00	655.00
IUUC-Atr-002892	Amborella trichopoda	42.57	6.00e-78	285.00
IUUC-Apl-004003	Anas platyrhynchos	90.68	3.00e-63	232.00
IUUC-Aca-004799	Anolis carolinensis	91.88	0.00e+00	634.00
IUUC-Aly-006352	Arabidopsis lyrata	42.77	3.00e-76	278.00
IUUC-Ath-006773	Arabidopsis thaliana	42.77	5.00e-76	278.00
IUUC-Ago-007894	Ashbya gossypii	25.94	1.00e-18	87.80
IUUC-Acl-008041	Aspergillus clavatus	31.47	1.00e-56	214.00
IUUC-Afl-008427	Aspergillus flavus	32.03	2.00e-50	194.00
IUUC-Afu-009023	Aspergillus fumigatus	31.97	2.00e-56	213.00
IUUC-Ani-009133	Aspergillus nidulans	32.52	2.00e-57	217.00
IUUC-Ang-009612	Aspergillus niger	34.03	2.00e-56	214.00
IUUC-Aor-010045	Aspergillus oryzae	31.77	2.00e-56	213.00
IUUC-Ate-010533	Aspergillus terreus	33.42	5.00e-56	212.00
IUUC-Ame-011083	Astyanax mexicanus	95.86	0.00e+00	653.00
IUUC-Bgr-012122	Blumeria graminis	34.25	6.00e-26	112.00
IUUC-Bta-013375	Bos taurus	91.34	0.00e+00	652.00
IUUC-Bci-013675	Botrytis cinerea	27.95	1.00e-43	171.00
IUUC-Bdi-015070	Brachypodium distachyon	42.06	1.00e-70	260.00
IUUC-Bol-015674	Brassica oleracea	42.27	4.00e-76	278.00
IUUC-Bra-017516	Brassica rapa	41.40	2.00e-73	269.00
IUUC-Cel-018422	Caenorhabditis elegans	58.08	1.00e-117	417.00
IUUC-Cja-019779	Callithrix jacchus	88.46	7.00e-179	620.00
IUUC-Cfa-020189	Canis familiaris	91.34	0.00e+00	654.00
IUUC-Cpo-022209	Cavia porcellus	90.80	0.00e+00	652.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	38.29	3.00e-64	238.00
IUUC-Csa-023571	Chlorocebus sabaeus	91.34	0.00e+00	652.00
IUUC-Cho-024889	Choloepus hoffmanni	82.20	7.00e-167	580.00
IUUC-Csv-026160	Ciona savignyi	61.78	3.00e-125	442.00
IUUC-Cne-027002	Cryptococcus neoformans	39.83	2.00e-75	276.00
IUUC-Cme-027285	Cyanidioschyzon merolae	36.68	2.00e-50	193.00
IUUC-Dre-027999	Danio rerio	96.74	0.00e+00	658.00
IUUC-Dno-029250	Dasypus novemcinctus	90.80	0.00e+00	653.00
IUUC-Dor-030718	Dipodomys ordii	86.65	2.00e-178	618.00
IUUC-Dse-031498	Dothistroma septosporum	34.76	2.00e-27	117.00
IUUC-Dme-031969	Drosophila melanogaster	64.09	2.00e-142	498.00
IUUC-Ete-032592	Echinops telfairi	83.08	6.00e-27	114.00
IUUC-Eca-033258	Equus caballus	91.10	0.00e+00	655.00
IUUC-Fca-035980	Felis catus	91.37	0.00e+00	657.00
IUUC-Fal-037554	Ficedula albicollis	66.09	6.00e-97	347.00
IUUC-Fox-037902	Fusarium oxysporum	30.67	3.00e-52	199.00
IUUC-Fso-038418	Fusarium solani	31.17	2.00e-49	190.00
IUUC-Gmo-039288	Gadus morhua	96.34	0.00e+00	668.00
IUUC-Ggr-040076	Gaeumannomyces graminis	39.44	8.00e-27	115.00
IUUC-Gga-040347	Gallus gallus	88.81	1.00e-72	264.00
IUUC-Gac-042347	Gasterosteus aculeatus	97.79	0.00e+00	663.00
IUUC-Gma-044123	Glycine max	43.94	1.00e-73	270.00
IUUC-Ggo-044858	Gorilla gorilla	91.10	0.00e+00	655.00
IUUC-Hsa-046412	Homo sapiens	91.10	0.00e+00	654.00
IUUC-Hvu-047279	Hordeum vulgare	42.06	3.00e-70	258.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	91.34	0.00e+00	651.00
IUUC-Kpa-049117	Komagataella pastoris	29.06	9.00e-31	127.00
IUUC-Lch-049533	Latimeria chalumnae	48.70	4.00e-72	265.00
IUUC-Lpe-051229	Leersia perrieri	33.33	1.00e-34	140.00
IUUC-Loc-052843	Lepisosteus oculatus	93.06	9.00e-123	432.00
IUUC-Lma-052997	Leptosphaeria maculans	32.81	2.00e-59	223.00
IUUC-Laf-053482	Loxodonta africana	91.34	0.00e+00	651.00
IUUC-Mcc-055075	Macaca mulatta	91.10	0.00e+00	655.00
IUUC-Meu-056683	Macropus eugenii	91.22	1.00e-143	502.00
IUUC-Mor-057082	Magnaporthe oryzae	32.09	1.00e-55	211.00
IUUC-Mpo-057573	Magnaporthe poae	31.51	3.00e-51	196.00
IUUC-Mtr-058601	Medicago truncatula	42.65	1.00e-79	290.00
IUUC-Mla-059168	Melampsora laricipopulina	38.61	1.00e-74	274.00
IUUC-Mga-059510	Meleagris gallopavo	93.98	2.00e-45	174.00
IUUC-Mvi-060515	Microbotryum violaceum	41.33	1.00e-65	244.00
IUUC-Mmr-060922	Microcebus murinus	91.10	0.00e+00	653.00
IUUC-Mdo-062491	Monodelphis domestica	90.80	0.00e+00	635.00
IUUC-Mmu-063770	Mus musculus	91.37	0.00e+00	654.00
IUUC-Mac-064789	Musa acuminata	42.23	1.00e-79	290.00
IUUC-Mpu-066107	Mustela putorius furo	90.32	0.00e+00	652.00
IUUC-Mlu-067918	Myotis lucifugus	91.64	2.00e-175	608.00
IUUC-Nfi-068389	Neosartorya fischeri	30.75	1.00e-55	211.00
IUUC-Ncr-068742	Neurospora crassa	34.08	2.00e-50	194.00
IUUC-Nle-069139	Nomascus leucogenys	91.10	0.00e+00	654.00
IUUC-Opr-070898	Ochotona princeps	87.98	3.00e-113	402.00
IUUC-Ont-071991	Oreochromis niloticus	96.96	0.00e+00	686.00
IUUC-Ocu-074065	Oryctolagus cuniculus	90.80	0.00e+00	652.00
IUUC-Oba-075221	Oryza barthii	41.18	9.00e-68	250.00
IUUC-Obr-076914	Oryza brachyantha	42.53	4.00e-64	238.00
IUUC-Ogu-078124	Oryza glumaepatula	41.18	8.00e-68	250.00
IUUC-Oin-080013	Oryza indica	39.23	7.00e-64	237.00
IUUC-Olo-080247	Oryza longistaminata	38.96	2.00e-59	222.00
IUUC-Ome-081769	Oryza meridionalis	41.89	1.00e-70	260.00
IUUC-Oni-082946	Oryza nivara	41.18	8.00e-68	250.00
IUUC-Opu-083268	Oryza punctata	36.28	1.00e-49	191.00
IUUC-Oru-085114	Oryza rufipogon	41.18	8.00e-68	250.00
IUUC-Osa-085829	Oryza sativa	41.76	1.00e-70	259.00
IUUC-Olu-087894	Ostreococcus lucimarinus	42.47	9.00e-75	273.00
IUUC-Oga-089036	Otolemur garnettii	91.34	0.00e+00	652.00
IUUC-Oar-089715	Ovis aries	91.10	0.00e+00	654.00
IUUC-Ptr-091000	Pan troglodytes	91.34	0.00e+00	652.00
IUUC-Pan-092187	Papio anubis	91.10	0.00e+00	655.00
IUUC-Psi-093377	Pelodiscus sinensis	93.02	1.00e-173	602.00
IUUC-Pma-094759	Petromyzon marinus	91.49	1.00e-79	290.00
IUUC-Pno-094883	Phaeosphaeria nodorum	32.09	2.00e-56	214.00
IUUC-Ppa-095684	Physcomitrella patens	43.89	2.00e-71	263.00
IUUC-Pfo-096861	Poecilia formosa	97.33	0.00e+00	676.00
IUUC-Pab-098030	Pongo abelii	91.10	0.00e+00	654.00
IUUC-Pop-099245	Populus trichocarpa	42.73	5.00e-82	298.00
IUUC-Pca-100191	Procavia capensis	86.84	3.00e-180	624.00
IUUC-Ppe-101829	Prunus persica	43.15	9.00e-82	297.00
IUUC-Pva-102689	Pteropus vampyrus	91.10	0.00e+00	656.00
IUUC-Pgr-103286	Puccinia graminis	37.02	5.00e-71	262.00
IUUC-Ptt-103919	Puccinia triticina	37.15	1.00e-69	257.00
IUUC-Pte-104372	Pyrenophora teres	32.75	1.00e-62	234.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	32.75	1.00e-60	228.00
IUUC-Rno-105723	Rattus norvegicus	91.34	0.00e+00	651.00
IUUC-Sce-106348	Saccharomyces cerevisiae	26.09	2.00e-24	107.00
IUUC-Sha-107300	Sarcophilus harrisii	90.87	1.00e-144	506.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	27.63	5.00e-37	148.00
IUUC-Spo-108308	Schizosaccharomyces pombe	29.51	8.00e-37	148.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	28.57	1.00e-41	165.00
IUUC-Smo-109123	Selaginella moellendorffii	45.74	1.00e-75	276.00
IUUC-Sit-110276	Setaria italica	41.89	1.00e-71	263.00
IUUC-Sly-111819	Solanum lycopersicum	44.16	2.00e-74	273.00
IUUC-Stu-112048	Solanum tuberosum	42.90	3.00e-76	279.00
IUUC-Sbi-114192	Sorghum bicolor	43.17	3.00e-68	252.00
IUUC-Sre-115212	Sporisorium reilianum	37.65	3.00e-64	239.00
IUUC-Ssc-116323	Sus scrofa	91.04	0.00e+00	649.00
IUUC-Tgu-117156	Taeniopygia guttata	88.31	8.00e-38	147.00
IUUC-Tru-118045	Takifugu rubripes	95.82	0.00e+00	680.00
IUUC-Tsy-118823	Tarsius syrichta	79.31	4.00e-148	516.00
IUUC-Tni-120106	Tetraodon nigroviridis	94.86	5.00e-136	477.00
IUUC-Tca-121462	Theobroma cacao	44.31	2.00e-80	293.00
IUUC-Tre-122204	Trichoderma reesei	40.40	5.00e-28	119.00
IUUC-Tvi-122550	Trichoderma virens	31.51	1.00e-52	201.00
IUUC-Tae-125239	Triticum aestivum	42.35	5.00e-72	265.00
IUUC-Tur-126538	Triticum urartu	37.42	1.00e-49	191.00
IUUC-Tme-127197	Tuber melanosporum	39.33	2.00e-66	247.00
IUUC-Tbe-127385	Tupaia belangeri	82.49	8.00e-167	580.00
IUUC-Ttr-128795	Tursiops truncatus	91.10	0.00e+00	654.00
IUUC-Uma-129401	Ustilago maydis	36.72	7.00e-54	205.00
IUUC-Vda-129968	Verticillium dahliae	29.21	1.00e-46	181.00
IUUC-Vvi-130944	Vitis vinifera	44.31	6.00e-82	297.00
IUUC-Xtr-131884	Xenopus tropicalis	88.99	0.00e+00	627.00
IUUC-Xma-133488	Xiphophorus maculatus	97.33	0.00e+00	677.00
IUUC-Yli-134552	Yarrowia lipolytica	26.84	1.00e-37	150.00
IUUC-Zma-135530	Zea mays	43.49	9.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence