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Tag Content
iUUCD ID IUUC-Ont-072484
Ensembl Protein ID ENSONIP00000018833.1
UniProt Accession I3KCI8; I3KCI8_ORENI
Genbank Protein ID ENSONIP00000018833
Protein Name Uncharacterized protein
Genbank Nucleotide ID AERX01035728
Gene Name rad23b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSONIG00000014959.1 ENSONIT00000018849.1 ENSONIP00000018832.1
ENSONIG00000014959.1 ENSONIT00000018850.1 ENSONIP00000018833.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/UBA 1.40e-18 66.8 193 230
ULD/UDP/UBQ/UBQ_PIM 1.70e-24 86.0 1 76
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA
   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLldg 41
             ++++++ MG++re+++ aLra++nn+++A+eyLl+g
   Q: 193  DAMVNEMMLMGYEREQVVAALRASFNNPDRAMEYLLTG 230
           569*********************************97 PP
   

   ULD/UDP/UBQ/UBQ_PIM
   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m +t+ktl++++f+++++e++tv  lKe+i++e+g   + ++ qkLIyaGkiL+Dd++L+e++i+++++v+++v+k
   Q: 1    MLITLKTLQQQTFKIDIDEEETVRTLKERIEQEKGkeiFSVAGQKLIYAGKILSDDSPLKEYKIDEKNFVVVMVTK 76
           789********************************99999*********************************987 PP
   
Organism Oreochromis niloticus
Protein Sequence
(Fasta)
MLITLKTLQQ QTFKIDIDEE ETVRTLKERI EQEKGKEIFS VAGQKLIYAG KILSDDSPLK 60
EYKIDEKNFV VVMVTKLTLS DSSKPTELPK ESAAIPCDAT ADPAESSLKP KKAPTASQPS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ont-072484|UBD,UBA;ULD,UBQ_PIM|Oreochromis niloticus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAAAACTCA CCAACGAGCA CACCTGAGCA TTGTGGCCAA TGCTCAGTTT ACTGCAGTAC 60
CGAAGCAATC CACTAGGAGC GCTGTGCGTC AAGTATTTAA CATAGAAGAA GAAAAGCGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ont-072484|UBD,UBA;ULD,UBQ_PIM|Oreochromis niloticus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd
PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2
Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding
PRINTS

PR01839--RAD23PROTEIN
SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ
Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000770 Aegilops tauschii 36.98 4.00e-33 135.00
IUUC-Aml-001195 Ailuropoda melanoleuca 64.03 4.00e-67 248.00
IUUC-Atr-003116 Amborella trichopoda 38.89 3.00e-32 132.00
IUUC-Apl-003371 Anas platyrhynchos 51.67 6.00e-85 307.00
IUUC-Ath-006676 Arabidopsis thaliana 39.54 2.00e-41 163.00
IUUC-Ago-007830 Ashbya gossypii 31.75 2.00e-15 77.40
IUUC-Acl-008212 Aspergillus clavatus 34.80 2.00e-24 107.00
IUUC-Afl-008605 Aspergillus flavus 36.65 4.00e-30 125.00
IUUC-Ani-009460 Aspergillus nidulans 39.27 2.00e-32 133.00
IUUC-Aor-010032 Aspergillus oryzae 36.65 3.00e-30 125.00
IUUC-Bgr-012056 Blumeria graminis 32.27 5.00e-36 145.00
IUUC-Bta-012922 Bos taurus 67.23 4.00e-70 258.00
IUUC-Bci-013933 Botrytis cinerea 37.94 6.00e-29 121.00
IUUC-Bdi-014355 Brachypodium distachyon 33.02 1.00e-45 177.00
IUUC-Bra-016970 Brassica rapa 32.85 3.00e-50 192.00
IUUC-Cel-018364 Caenorhabditis elegans 34.15 1.00e-16 80.50
IUUC-Cja-018772 Callithrix jacchus 61.31 7.00e-69 254.00
IUUC-Cfa-020683 Canis familiaris 62.22 2.00e-68 253.00
IUUC-Cpo-021850 Cavia porcellus 54.05 6.00e-94 337.00
IUUC-Cre-022810 Chlamydomonas reinhardtii 39.81 3.00e-27 116.00
IUUC-Csa-023714 Chlorocebus sabaeus 60.14 5.00e-72 265.00
IUUC-Cho-024814 Choloepus hoffmanni 63.84 1.00e-60 227.00
IUUC-Cin-025741 Ciona intestinalis 40.45 5.00e-35 141.00
IUUC-Csv-025823 Ciona savignyi 35.13 8.00e-38 150.00
IUUC-Cgl-026495 Colletotrichum gloeosporioides 46.00 9.00e-16 77.80
IUUC-Cme-027260 Cyanidioschyzon merolae 28.45 2.00e-23 103.00
IUUC-Dno-029543 Dasypus novemcinctus 61.68 6.00e-70 258.00
IUUC-Ete-032583 Echinops telfairi 63.86 3.00e-48 186.00
IUUC-Eca-033599 Equus caballus 50.26 1.00e-75 276.00
IUUC-Eeu-034721 Erinaceus europaeus 63.13 4.00e-49 188.00
IUUC-Fca-035679 Felis catus 62.50 7.00e-69 254.00
IUUC-Fal-037148 Ficedula albicollis 65.98 1.00e-68 253.00
IUUC-Fox-037960 Fusarium oxysporum 44.88 8.00e-17 81.60
IUUC-Fso-038107 Fusarium solani 44.88 2.00e-17 83.20
IUUC-Gmo-038751 Gadus morhua 63.60 1.00e-70 259.00
IUUC-Ggr-040116 Gaeumannomyces graminis 46.21 1.00e-17 84.00
IUUC-Gga-040544 Gallus gallus 56.35 2.00e-89 322.00
IUUC-Gac-042239 Gasterosteus aculeatus 75.09 5.00e-92 331.00
IUUC-Gma-044245 Glycine max 35.27 1.00e-54 207.00
IUUC-Ggo-045125 Gorilla gorilla 63.81 5.00e-70 258.00
IUUC-Hsa-046519 Homo sapiens 63.81 5.00e-70 258.00
IUUC-Hvu-047832 Hordeum vulgare 37.11 1.00e-33 137.00
IUUC-Itr-048295 Ictidomys tridecemlineatus 62.03 1.00e-65 243.00
IUUC-Kpa-049314 Komagataella pastoris 34.65 5.00e-28 118.00
IUUC-Lpe-051087 Leersia perrieri 37.11 3.00e-35 142.00
IUUC-Loc-051748 Lepisosteus oculatus 54.79 1.00e-90 326.00
IUUC-Laf-054293 Loxodonta africana 53.94 3.00e-84 305.00
IUUC-Mpo-057609 Magnaporthe poae 46.46 5.00e-17 81.60
IUUC-Mtr-058239 Medicago truncatula 32.52 2.00e-46 179.00
IUUC-Mvi-060220 Microbotryum violaceum 41.91 7.00e-20 92.00
IUUC-Mmr-061159 Microcebus murinus 65.85 7.00e-69 254.00
IUUC-Mmu-063258 Mus musculus 61.21 4.00e-72 265.00
IUUC-Mac-064468 Musa acuminata 32.16 7.00e-51 194.00
IUUC-Mlu-067787 Myotis lucifugus 52.94 2.00e-91 329.00
IUUC-Ncr-068685 Neurospora crassa 37.20 8.00e-29 121.00
IUUC-Nle-069655 Nomascus leucogenys 61.68 3.00e-71 262.00
IUUC-Oan-073572 Ornithorhynchus anatinus 53.16 6.00e-90 324.00
IUUC-Ocu-074831 Oryctolagus cuniculus 61.82 3.00e-67 249.00
IUUC-Oba-075392 Oryza barthii 35.21 1.00e-34 141.00
IUUC-Obr-076909 Oryza brachyantha 37.45 2.00e-40 160.00
IUUC-Ogl-077067 Oryza glaberrima 31.12 5.00e-50 191.00
IUUC-Ogu-078883 Oryza glumaepatula 35.21 8.00e-35 141.00
IUUC-Oin-079817 Oryza indica 35.21 1.00e-34 140.00
IUUC-Olo-080929 Oryza longistaminata 35.21 5.00e-35 142.00
IUUC-Ome-081866 Oryza meridionalis 35.21 6.00e-35 141.00
IUUC-Oni-083092 Oryza nivara 35.21 1.00e-34 140.00
IUUC-Opu-083963 Oryza punctata 38.75 3.00e-41 162.00
IUUC-Oru-084816 Oryza rufipogon 35.21 1.00e-34 140.00
IUUC-Osa-086112 Oryza sativa 35.21 1.00e-34 140.00
IUUC-Ola-086540 Oryzias latipes 66.43 9.00e-117 413.00
IUUC-Olu-087843 Ostreococcus lucimarinus 40.44 5.00e-40 158.00
IUUC-Oga-089075 Otolemur garnettii 53.53 7.00e-90 323.00
IUUC-Ptr-091165 Pan troglodytes 63.81 9.00e-70 257.00
IUUC-Pan-092009 Papio anubis 60.43 3.00e-69 255.00
IUUC-Psi-093477 Pelodiscus sinensis 62.79 6.00e-60 224.00
IUUC-Ppa-095654 Physcomitrella patens 38.17 1.00e-36 147.00
IUUC-Pfo-097385 Poecilia formosa 64.69 3.00e-124 438.00
IUUC-Pop-099642 Populus trichocarpa 33.78 1.00e-54 207.00
IUUC-Ppe-101830 Prunus persica 31.76 5.00e-44 171.00
IUUC-Pgr-103641 Puccinia graminis 36.36 3.00e-26 112.00
IUUC-Pte-104303 Pyrenophora teres 50.38 2.00e-20 93.60
IUUC-Pyt-104580 Pyrenophora triticirepentis 50.00 3.00e-20 92.80
IUUC-Rno-104844 Rattus norvegicus 61.07 3.00e-72 265.00
IUUC-Sja-107851 Schizosaccharomyces japonicus 40.65 2.00e-38 153.00
IUUC-Spo-108298 Schizosaccharomyces pombe 40.85 9.00e-38 150.00
IUUC-Smo-109129 Selaginella moellendorffii 33.02 5.00e-38 152.00
IUUC-Sit-109813 Setaria italica 39.43 6.00e-40 158.00
IUUC-Sly-111899 Solanum lycopersicum 32.10 3.00e-53 202.00
IUUC-Stu-112027 Solanum tuberosum 34.41 5.00e-56 211.00
IUUC-Sar-112925 Sorex araneus 68.28 1.00e-63 236.00
IUUC-Sbi-114459 Sorghum bicolor 31.15 6.00e-46 177.00
IUUC-Tgu-116918 Taeniopygia guttata 56.90 1.00e-100 359.00
IUUC-Tru-118651 Takifugu rubripes 73.64 4.00e-85 308.00
IUUC-Tsy-118836 Tarsius syrichta 78.68 2.00e-42 166.00
IUUC-Tca-121594 Theobroma cacao 32.14 6.00e-42 164.00
IUUC-Tre-121911 Trichoderma reesei 40.17 1.00e-29 124.00
IUUC-Tvi-122617 Trichoderma virens 47.24 3.00e-18 86.30
IUUC-Tae-125230 Triticum aestivum 35.93 9.00e-34 137.00
IUUC-Tur-126610 Triticum urartu 36.98 8.00e-34 138.00
IUUC-Tme-127092 Tuber melanosporum 38.46 9.00e-25 107.00
IUUC-Tbe-127493 Tupaia belangeri 49.46 1.00e-44 174.00
IUUC-Ttr-128464 Tursiops truncatus 56.12 1.00e-87 317.00
IUUC-Uma-129484 Ustilago maydis 50.98 1.00e-11 64.70
IUUC-Vda-129946 Verticillium dahliae 46.97 7.00e-19 88.20
IUUC-Vpa-130357 Vicugna pacos 55.79 3.00e-41 162.00
IUUC-Vvi-131039 Vitis vinifera 38.00 6.00e-42 164.00
IUUC-Xtr-132679 Xenopus tropicalis 63.22 2.00e-56 213.00
IUUC-Xma-133503 Xiphophorus maculatus 61.94 2.00e-121 429.00
IUUC-Yli-134615 Yarrowia lipolytica 42.18 9.00e-37 147.00
Created Date 25-Jun-2017

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