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Tag Content
UUCD2 ID IUUC-Pop-099320
UUCD1 version UUC-PoT-00339
Ensembl Protein ID POPTR_0004s20080.1
UniProt Accession U5GJT4; U5GJT4_POPTR
Genbank Protein ID ERP62474.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000340
Gene Name RAD5; POPTR_0004s20080g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0004s20080 POPTR_0004s20080.1 POPTR_0004s20080.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 73.01 0.00e+00 1505.00 IUUC-Ath-007517
E3 activity/RING/RING 32.27 5.00e-129 456.00 IUUC-Spo-108026
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MGTKVTEELV STVRSIVGCD FSDMDIIRAL HLAKNDPTAA INIILDTPNF ISKQKNLTPK 60
TPNPKSKTVP YKPPNFVVKD NGNRNSSQNL EVNCVENDAS DSTVGDNGSV SGLVGSEWWF 120
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Protein Fasta Sequence


>IUUC-Pop-099320|E3,RING|Populus trichocarpa
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Nucleotide Sequence
(Fasta)
ATGGGAACCA AGGTAACCGA AGAGCTAGTC TCCACCGTCC GATCAATCGT TGGCTGTGAT 60
TTCTCCGATA TGGACATAAT CAGAGCTCTC CACTTGGCAA AAAACGACCC CACCGCTGCA 120
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Nucleotide Fasta Sequence


>IUUC-Pop-099320|E3,RING|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N
SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING
Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
KEGG pop:POPTR_0004s20080g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001237 Ailuropoda melanoleuca 36.53 8.00e-98 351.00
IUUC-Atr-003139 Amborella trichopoda 68.82 0.00e+00 1459.00
IUUC-Apl-003679 Anas platyrhynchos 31.18 8.00e-42 165.00
IUUC-Aca-004994 Anolis carolinensis 39.55 7.00e-107 381.00
IUUC-Aly-006331 Arabidopsis lyrata 71.07 0.00e+00 1485.00
IUUC-Ath-007517 Arabidopsis thaliana 71.54 0.00e+00 1495.00
IUUC-Acl-008022 Aspergillus clavatus 30.92 3.00e-124 439.00
IUUC-Afl-008514 Aspergillus flavus 29.14 7.00e-126 444.00
IUUC-Afu-009055 Aspergillus fumigatus 29.63 1.00e-125 444.00
IUUC-Ani-009340 Aspergillus nidulans 31.35 3.00e-120 426.00
IUUC-Ang-009785 Aspergillus niger 30.51 3.00e-127 449.00
IUUC-Aor-010158 Aspergillus oryzae 30.54 1.00e-125 444.00
IUUC-Ate-010536 Aspergillus terreus 30.32 1.00e-109 390.00
IUUC-Bgr-012147 Blumeria graminis 31.94 2.00e-130 460.00
IUUC-Bta-013391 Bos taurus 36.55 2.00e-106 379.00
IUUC-Bdi-014646 Brachypodium distachyon 65.04 0.00e+00 1324.00
IUUC-Bol-015484 Brassica oleracea 71.13 0.00e+00 1439.00
IUUC-Bra-016925 Brassica rapa 71.48 0.00e+00 1448.00
IUUC-Cja-019685 Callithrix jacchus 37.93 2.00e-105 377.00
IUUC-Cfa-020485 Canis familiaris 36.69 5.00e-98 352.00
IUUC-Cpo-021361 Cavia porcellus 37.34 2.00e-99 355.00
IUUC-Cre-022824 Chlamydomonas reinhardtii 27.83 4.00e-59 223.00
IUUC-Csa-023894 Chlorocebus sabaeus 36.01 5.00e-106 378.00
IUUC-Csv-026168 Ciona savignyi 28.29 2.00e-40 160.00
IUUC-Cgl-026606 Colletotrichum gloeosporioides 36.13 1.00e-131 464.00
IUUC-Cme-027110 Cyanidioschyzon merolae 37.55 5.00e-127 448.00
IUUC-Dre-027867 Danio rerio 38.48 3.00e-108 385.00
IUUC-Dno-029517 Dasypus novemcinctus 37.81 1.00e-98 353.00
IUUC-Dor-030651 Dipodomys ordii 33.97 7.00e-47 182.00
IUUC-Dse-031471 Dothistroma septosporum 34.40 5.00e-128 451.00
IUUC-Dme-031815 Drosophila melanogaster 30.99 2.00e-64 240.00
IUUC-Ete-032421 Echinops telfairi 32.84 9.00e-78 284.00
IUUC-Eca-034058 Equus caballus 35.71 8.00e-93 334.00
IUUC-Eeu-034597 Erinaceus europaeus 31.64 2.00e-60 227.00
IUUC-Fca-035390 Felis catus 36.53 4.00e-97 348.00
IUUC-Fal-037486 Ficedula albicollis 30.69 5.00e-72 265.00
IUUC-Fox-038039 Fusarium oxysporum 35.61 3.00e-132 465.00
IUUC-Fso-038179 Fusarium solani 33.76 1.00e-141 496.00
IUUC-Gmo-038544 Gadus morhua 39.86 2.00e-110 392.00
IUUC-Ggr-039735 Gaeumannomyces graminis 32.41 4.00e-128 452.00
IUUC-Gac-042401 Gasterosteus aculeatus 40.54 2.00e-112 399.00
IUUC-Gma-042995 Glycine max 72.38 0.00e+00 1493.00
IUUC-Ggo-045628 Gorilla gorilla 38.04 1.00e-106 380.00
IUUC-Hsa-045930 Homo sapiens 38.04 2.00e-106 380.00
IUUC-Hvu-047495 Hordeum vulgare 65.79 0.00e+00 1100.00
IUUC-Itr-048493 Ictidomys tridecemlineatus 38.41 2.00e-104 373.00
IUUC-Kpa-049087 Komagataella pastoris 30.96 6.00e-104 372.00
IUUC-Lch-050617 Latimeria chalumnae 39.32 2.00e-110 393.00
IUUC-Lpe-051584 Leersia perrieri 63.65 0.00e+00 1233.00
IUUC-Loc-052785 Lepisosteus oculatus 39.60 2.00e-112 399.00
IUUC-Lma-052956 Leptosphaeria maculans 35.83 5.00e-131 461.00
IUUC-Laf-054309 Loxodonta africana 35.70 3.00e-98 352.00
IUUC-Mcc-055493 Macaca mulatta 37.86 2.00e-106 379.00
IUUC-Mor-057210 Magnaporthe oryzae 32.12 4.00e-133 469.00
IUUC-Mpo-057407 Magnaporthe poae 32.52 4.00e-134 472.00
IUUC-Mtr-058565 Medicago truncatula 69.52 0.00e+00 1429.00
IUUC-Mga-059553 Meleagris gallopavo 32.26 5.00e-42 166.00
IUUC-Mvi-060322 Microbotryum violaceum 31.50 3.00e-90 326.00
IUUC-Mmr-061043 Microcebus murinus 38.29 4.00e-97 348.00
IUUC-Mmu-064338 Mus musculus 36.19 2.00e-103 370.00
IUUC-Mpu-066781 Mustela putorius furo 36.53 9.00e-98 351.00
IUUC-Mlu-068076 Myotis lucifugus 38.46 9.00e-100 357.00
IUUC-Nfi-068354 Neosartorya fischeri 31.48 3.00e-126 446.00
IUUC-Ncr-068844 Neurospora crassa 34.43 8.00e-127 447.00
IUUC-Nle-069947 Nomascus leucogenys 38.04 1.00e-106 380.00
IUUC-Ont-071782 Oreochromis niloticus 40.33 2.00e-109 390.00
IUUC-Oan-073331 Ornithorhynchus anatinus 37.12 3.00e-99 356.00
IUUC-Ocu-074705 Oryctolagus cuniculus 38.55 7.00e-105 374.00
IUUC-Oba-075937 Oryza barthii 66.78 0.00e+00 1204.00
IUUC-Obr-076403 Oryza brachyantha 70.05 0.00e+00 1261.00
IUUC-Ogl-077573 Oryza glaberrima 65.90 0.00e+00 1349.00
IUUC-Ogu-077957 Oryza glumaepatula 63.00 0.00e+00 1240.00
IUUC-Oin-079146 Oryza indica 66.25 0.00e+00 1334.00
IUUC-Olo-080437 Oryza longistaminata 59.40 0.00e+00 1040.00
IUUC-Ome-081448 Oryza meridionalis 64.60 0.00e+00 1286.00
IUUC-Oni-082389 Oryza nivara 62.59 0.00e+00 1220.00
IUUC-Opu-083322 Oryza punctata 63.90 0.00e+00 1249.00
IUUC-Oru-085066 Oryza rufipogon 62.86 0.00e+00 1243.00
IUUC-Osa-085686 Oryza sativa 72.27 0.00e+00 1192.00
IUUC-Ola-086830 Oryzias latipes 36.41 1.00e-97 350.00
IUUC-Oga-088120 Otolemur garnettii 38.00 6.00e-90 325.00
IUUC-Oar-089293 Ovis aries 38.66 1.00e-105 377.00
IUUC-Ptr-091418 Pan troglodytes 38.04 3.00e-106 379.00
IUUC-Psi-093626 Pelodiscus sinensis 39.82 3.00e-110 392.00
IUUC-Pno-094916 Phaeosphaeria nodorum 32.42 9.00e-130 457.00
IUUC-Ppa-095877 Physcomitrella patens 56.88 0.00e+00 1068.00
IUUC-Pfo-096540 Poecilia formosa 39.14 8.00e-108 384.00
IUUC-Pab-098010 Pongo abelii 38.04 4.00e-106 379.00
IUUC-Pca-100648 Procavia capensis 37.68 1.00e-102 367.00
IUUC-Ppe-101820 Prunus persica 76.63 0.00e+00 1560.00
IUUC-Pva-102896 Pteropus vampyrus 39.19 4.00e-89 322.00
IUUC-Pgr-103454 Puccinia graminis 27.62 6.00e-78 285.00
IUUC-Ptt-103829 Puccinia triticina 30.71 1.00e-90 327.00
IUUC-Pte-104242 Pyrenophora teres 34.42 2.00e-124 439.00
IUUC-Pyt-104728 Pyrenophora triticirepentis 34.07 4.00e-124 439.00
IUUC-Rno-106130 Rattus norvegicus 36.68 5.00e-107 382.00
IUUC-Sja-107985 Schizosaccharomyces japonicus 32.42 9.00e-128 451.00
IUUC-Spo-108026 Schizosaccharomyces pombe 32.65 7.00e-131 461.00
IUUC-Ssl-108388 Sclerotinia sclerotiorum 33.33 1.00e-133 470.00
IUUC-Smo-108977 Selaginella moellendorffii 68.55 1.00e-156 545.00
IUUC-Sit-110076 Setaria italica 64.49 0.00e+00 1295.00
IUUC-Sly-111908 Solanum lycopersicum 71.85 0.00e+00 1504.00
IUUC-Sar-113719 Sorex araneus 38.10 5.00e-108 385.00
IUUC-Sbi-113927 Sorghum bicolor 64.90 0.00e+00 1303.00
IUUC-Ssc-116186 Sus scrofa 36.55 5.00e-106 378.00
IUUC-Tru-117768 Takifugu rubripes 40.29 8.00e-103 367.00
IUUC-Tsy-118957 Tarsius syrichta 38.39 4.00e-101 362.00
IUUC-Tni-120618 Tetraodon nigroviridis 39.13 3.00e-109 389.00
IUUC-Tca-121137 Theobroma cacao 76.93 0.00e+00 1591.00
IUUC-Tre-121896 Trichoderma reesei 33.40 3.00e-137 482.00
IUUC-Tvi-122597 Trichoderma virens 33.83 5.00e-143 501.00
IUUC-Tae-125934 Triticum aestivum 69.26 0.00e+00 1298.00
IUUC-Tur-126433 Triticum urartu 68.46 0.00e+00 1010.00
IUUC-Tme-126953 Tuber melanosporum 32.91 5.00e-132 464.00
IUUC-Tbe-127642 Tupaia belangeri 36.55 9.00e-42 165.00
IUUC-Ttr-128243 Tursiops truncatus 34.10 2.00e-53 204.00
IUUC-Uma-129629 Ustilago maydis 32.09 4.00e-117 416.00
IUUC-Vda-129849 Verticillium dahliae 34.48 6.00e-118 418.00
IUUC-Vpa-130672 Vicugna pacos 36.55 1.00e-99 357.00
IUUC-Vvi-130943 Vitis vinifera 75.31 0.00e+00 1584.00
IUUC-Xtr-132730 Xenopus tropicalis 39.13 7.00e-114 404.00
IUUC-Xma-133384 Xiphophorus maculatus 38.91 5.00e-110 392.00
Created Date 25-Jun-2017

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