iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091659

UUCD1 version

UUC-PaT-00968

Ensembl Protein ID

ENSPTRP00000059355.1

UniProt Accession

H2RDU3; H2RDU3_PANTR

Genbank Protein ID

JAA04597.1; JAA04599.1; JAA04601.1; JAA19685.1; JAA19686.1; JAA19687.1; JAA19688.1; JAA29151.1; JAA43535.1; JAA43537.1

Protein Name

TATA element modulatory factor 1

Genbank Nucleotide ID

AACZ03027653; GABC01006739; GABC01006737; GABF01002460; GABF01002459; GABF01002458; GABF01002457; GABD01003949; GABE01001204; GABE01001202

Gene Name

TMF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000015094.5	ENSPTRT00000067767.1	ENSPTRP00000059355.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	99.45	0.00e+00	1862.00	IUUC-Hsa-046889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSIWAE TIPYGEPGIS SPVSGGWDTS 60
TWGLKSNTEP QSPPIASPKA ITKPVRRTVV DESENFFSAF LSPTDVQTIQ KSPVVSKPPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGATTTGG TTGCTGTGTA CGTGGAAGAA GCAAGCGCAT GCGCACATGG GCCCCCTTCG 60
TCTCAGCTGT GCGGGAACGG CCGAGGGTAA CATCCCGGGC TCGCAGGAGG CTGTCGGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022092--TMF_DNA-bd
IPR022091--TMF_TATA-bd

Pfam

PF12329--TMF_DNA_bd
PF12325--TMF_TATA_bd

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0005794--C:Golgi apparatus
GO:0001675--P:acrosome assembly
GO:0071407--P:cellular response to organic cyclic compound
GO:0042742--P:defense response to bacterium
GO:0030317--P:flagellated sperm motility
GO:0033327--P:Leydig cell differentiation
GO:0032275--P:luteinizing hormone secretion
GO:0043066--P:negative regulation of apoptotic process
GO:0010629--P:negative regulation of gene expression
GO:0001819--P:positive regulation of cytokine production
GO:2000845--P:positive regulation of testosterone secretion
GO:0061136--P:regulation of proteasomal protein catabolic process
GO:0007289--P:spermatid nucleus differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000973	Aegilops tauschii	28.90	4.00e-24	107.00
IUUC-Aml-001448	Ailuropoda melanoleuca	92.51	0.00e+00	1732.00
IUUC-Atr-003092	Amborella trichopoda	31.39	6.00e-41	162.00
IUUC-Apl-003546	Anas platyrhynchos	74.59	0.00e+00	1312.00
IUUC-Aca-004234	Anolis carolinensis	71.49	0.00e+00	1306.00
IUUC-Ath-007364	Arabidopsis thaliana	29.76	2.00e-36	147.00
IUUC-Acl-008271	Aspergillus clavatus	28.57	9.00e-12	65.90
IUUC-Afl-008405	Aspergillus flavus	27.06	6.00e-07	49.70
IUUC-Afu-009059	Aspergillus fumigatus	28.57	3.00e-12	67.40
IUUC-Ani-009416	Aspergillus nidulans	28.97	7.00e-11	62.80
IUUC-Ang-009857	Aspergillus niger	28.77	2.00e-11	64.30
IUUC-Aor-009910	Aspergillus oryzae	27.06	6.00e-07	49.70
IUUC-Ate-010427	Aspergillus terreus	32.74	4.00e-09	57.00
IUUC-Ame-011270	Astyanax mexicanus	66.07	0.00e+00	882.00
IUUC-Bgr-012100	Blumeria graminis	29.46	3.00e-08	53.90
IUUC-Bta-012337	Bos taurus	92.24	0.00e+00	1673.00
IUUC-Bci-013775	Botrytis cinerea	30.77	5.00e-06	47.00
IUUC-Bdi-014582	Brachypodium distachyon	33.16	2.00e-23	104.00
IUUC-Cel-018635	Caenorhabditis elegans	34.15	9.90e-02	30.80
IUUC-Cja-019803	Callithrix jacchus	97.07	0.00e+00	1813.00
IUUC-Cfa-020451	Canis familiaris	92.36	0.00e+00	1687.00
IUUC-Cpo-021327	Cavia porcellus	90.38	0.00e+00	1587.00
IUUC-Cre-022628	Chlamydomonas reinhardtii	29.01	6.00e-04	39.70
IUUC-Csa-023803	Chlorocebus sabaeus	98.44	0.00e+00	1837.00
IUUC-Cho-024293	Choloepus hoffmanni	89.09	0.00e+00	757.00
IUUC-Cin-025461	Ciona intestinalis	40.62	2.00e-38	152.00
IUUC-Cgl-026669	Colletotrichum gloeosporioides	27.03	2.00e-09	57.80
IUUC-Cme-027311	Cyanidioschyzon merolae	33.77	6.00e-04	39.30
IUUC-Dre-028098	Danio rerio	59.34	0.00e+00	971.00
IUUC-Dno-029535	Dasypus novemcinctus	91.41	0.00e+00	1647.00
IUUC-Dor-031120	Dipodomys ordii	88.04	0.00e+00	1655.00
IUUC-Dse-031548	Dothistroma septosporum	31.03	2.00e-08	54.30
IUUC-Dme-031658	Drosophila melanogaster	29.97	6.00e-21	96.30
IUUC-Ete-032764	Echinops telfairi	84.66	0.00e+00	1088.00
IUUC-Eca-034312	Equus caballus	93.42	0.00e+00	1688.00
IUUC-Eeu-034967	Erinaceus europaeus	84.23	0.00e+00	974.00
IUUC-Fca-036312	Felis catus	92.87	0.00e+00	1720.00
IUUC-Fal-036979	Ficedula albicollis	74.12	0.00e+00	1226.00
IUUC-Fox-037833	Fusarium oxysporum	43.18	3.00e-06	47.40
IUUC-Gmo-039175	Gadus morhua	65.73	0.00e+00	689.00
IUUC-Ggr-039752	Gaeumannomyces graminis	32.74	9.00e-11	62.40
IUUC-Gga-041252	Gallus gallus	74.51	0.00e+00	1321.00
IUUC-Gac-042186	Gasterosteus aculeatus	67.45	0.00e+00	673.00
IUUC-Gma-042878	Glycine max	30.21	1.00e-31	132.00
IUUC-Ggo-045127	Gorilla gorilla	98.99	0.00e+00	1852.00
IUUC-Hsa-046889	Homo sapiens	99.45	0.00e+00	1862.00
IUUC-Hvu-047231	Hordeum vulgare	33.89	2.00e-24	107.00
IUUC-Itr-048895	Ictidomys tridecemlineatus	83.64	0.00e+00	1370.00
IUUC-Kpa-049375	Komagataella pastoris	34.65	2.00e-08	54.70
IUUC-Lch-049701	Latimeria chalumnae	68.97	0.00e+00	1212.00
IUUC-Lpe-051071	Leersia perrieri	30.87	1.00e-15	79.00
IUUC-Loc-052900	Lepisosteus oculatus	61.76	0.00e+00	1072.00
IUUC-Lma-053189	Leptosphaeria maculans	24.80	3.00e-12	67.00
IUUC-Laf-054583	Loxodonta africana	90.76	0.00e+00	1593.00
IUUC-Meu-056215	Macropus eugenii	68.66	3.00e-115	409.00
IUUC-Mor-057227	Magnaporthe oryzae	26.54	2.00e-07	51.20
IUUC-Mpo-057315	Magnaporthe poae	42.31	5.00e-07	50.10
IUUC-Mtr-058276	Medicago truncatula	27.63	2.00e-23	104.00
IUUC-Mga-059916	Meleagris gallopavo	74.67	0.00e+00	1271.00
IUUC-Mmr-061789	Microcebus murinus	81.61	0.00e+00	1177.00
IUUC-Mdo-062174	Monodelphis domestica	80.79	0.00e+00	1484.00
IUUC-Mmu-063422	Mus musculus	86.50	0.00e+00	1501.00
IUUC-Mac-065498	Musa acuminata	28.43	6.00e-30	126.00
IUUC-Mpu-065744	Mustela putorius furo	92.14	0.00e+00	1753.00
IUUC-Mlu-066925	Myotis lucifugus	90.65	0.00e+00	1570.00
IUUC-Nfi-068254	Neosartorya fischeri	28.57	2.00e-12	68.20
IUUC-Ncr-068887	Neurospora crassa	27.81	5.00e-10	60.10
IUUC-Nle-070100	Nomascus leucogenys	98.63	0.00e+00	1844.00
IUUC-Opr-071131	Ochotona princeps	84.14	0.00e+00	1176.00
IUUC-Ont-071378	Oreochromis niloticus	61.45	0.00e+00	968.00
IUUC-Oan-073705	Ornithorhynchus anatinus	80.67	0.00e+00	1526.00
IUUC-Ocu-074158	Oryctolagus cuniculus	91.99	0.00e+00	1738.00
IUUC-Oba-075498	Oryza barthii	30.61	1.00e-16	82.40
IUUC-Obr-076136	Oryza brachyantha	31.60	4.00e-32	133.00
IUUC-Ogl-077020	Oryza glaberrima	33.67	3.00e-25	110.00
IUUC-Ogu-078875	Oryza glumaepatula	30.61	2.00e-19	91.70
IUUC-Oin-079223	Oryza indica	33.67	4.00e-25	110.00
IUUC-Olo-080859	Oryza longistaminata	31.02	2.00e-17	84.70
IUUC-Ome-081621	Oryza meridionalis	30.36	1.00e-16	82.80
IUUC-Oni-082628	Oryza nivara	30.61	2.00e-16	81.30
IUUC-Opu-083825	Oryza punctata	30.61	4.00e-19	90.50
IUUC-Oru-084959	Oryza rufipogon	30.36	3.00e-16	80.90
IUUC-Osa-086104	Oryza sativa	33.67	3.00e-25	110.00
IUUC-Ola-087148	Oryzias latipes	59.16	0.00e+00	998.00
IUUC-Olu-087856	Ostreococcus lucimarinus	31.85	2.00e-14	74.30
IUUC-Oga-088598	Otolemur garnettii	91.50	0.00e+00	1689.00
IUUC-Oar-090450	Ovis aries	91.07	0.00e+00	1654.00
IUUC-Pan-091964	Papio anubis	96.33	0.00e+00	1342.00
IUUC-Psi-093585	Pelodiscus sinensis	80.25	0.00e+00	981.00
IUUC-Pma-094379	Petromyzon marinus	50.40	0.00e+00	743.00
IUUC-Pno-095032	Phaeosphaeria nodorum	25.91	1.00e-09	58.90
IUUC-Ppa-095425	Physcomitrella patens	32.38	3.00e-53	203.00
IUUC-Pfo-096386	Poecilia formosa	65.01	0.00e+00	852.00
IUUC-Pab-098042	Pongo abelii	97.68	0.00e+00	981.00
IUUC-Pop-099005	Populus trichocarpa	37.04	8.00e-14	71.60
IUUC-Pca-100308	Procavia capensis	92.20	0.00e+00	1179.00
IUUC-Ppe-101449	Prunus persica	28.44	1.00e-25	112.00
IUUC-Pva-103119	Pteropus vampyrus	87.16	0.00e+00	1193.00
IUUC-Pte-104335	Pyrenophora teres	25.97	1.00e-08	55.50
IUUC-Pyt-104547	Pyrenophora triticirepentis	26.62	1.00e-09	58.50
IUUC-Rno-105578	Rattus norvegicus	86.04	0.00e+00	1494.00
IUUC-Sha-106612	Sarcophilus harrisii	80.34	0.00e+00	1431.00
IUUC-Sja-107911	Schizosaccharomyces japonicus	25.19	6.00e-04	38.90
IUUC-Spo-108059	Schizosaccharomyces pombe	29.92	4.00e-08	52.80
IUUC-Ssl-108390	Sclerotinia sclerotiorum	25.89	9.00e-14	72.40
IUUC-Smo-108781	Selaginella moellendorffii	29.36	2.00e-17	82.80
IUUC-Sit-109754	Setaria italica	31.42	4.00e-25	110.00
IUUC-Sly-111573	Solanum lycopersicum	30.77	4.00e-34	140.00
IUUC-Sar-113118	Sorex araneus	85.54	0.00e+00	1518.00
IUUC-Sbi-114519	Sorghum bicolor	32.14	5.00e-24	106.00
IUUC-Ssc-115826	Sus scrofa	88.03	0.00e+00	1587.00
IUUC-Tgu-116702	Taeniopygia guttata	74.64	0.00e+00	1235.00
IUUC-Tru-117915	Takifugu rubripes	64.83	0.00e+00	824.00
IUUC-Tsy-119224	Tarsius syrichta	93.96	0.00e+00	1726.00
IUUC-Tni-120157	Tetraodon nigroviridis	59.41	0.00e+00	918.00
IUUC-Tca-121361	Theobroma cacao	28.61	7.00e-18	85.90
IUUC-Tre-122066	Trichoderma reesei	31.43	5.00e-09	56.60
IUUC-Tvi-122562	Trichoderma virens	32.29	6.00e-09	56.20
IUUC-Tae-123602	Triticum aestivum	33.16	3.00e-21	97.40
IUUC-Tme-126895	Tuber melanosporum	30.35	1.00e-06	48.10
IUUC-Tbe-128074	Tupaia belangeri	85.22	0.00e+00	1259.00
IUUC-Ttr-128190	Tursiops truncatus	92.68	0.00e+00	1722.00
IUUC-Vda-129710	Verticillium dahliae	30.97	7.00e-11	62.80
IUUC-Vpa-130072	Vicugna pacos	92.07	0.00e+00	1565.00
IUUC-Vvi-130853	Vitis vinifera	37.69	2.00e-10	61.60
IUUC-Xtr-131969	Xenopus tropicalis	65.22	0.00e+00	1107.00
IUUC-Xma-133623	Xiphophorus maculatus	64.62	0.00e+00	891.00
IUUC-Yli-134550	Yarrowia lipolytica	24.14	2.00e-12	67.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence