iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014197

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000880

Gene Name

LOC100824267; BRADI_1g20170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G20170	BRADI1G20170.1	BRADI1G20170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.90e-29	101.5	228	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp +f+Cp+slelM+dPv+++sG+ty+r +I+ wl++g + cP+trq+l++++l+Pn+t+++li +wce n++
   Q: 228  VPGDFCCPLSLELMSDPVIVASGQTYERVYIKLWLDEGFTICPKTRQRLSHSNLIPNYTVKALIANWCELNDI 300
           899******************************************************************9986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MENFSPSTLL NSISHLSVLT SDGSTARPKP IQKYCQNVCD ISSIVSPLIE EICKSPDEQL 60
NEVLRDLDTA INEASGLIGN WQQTTSKIYF VWQIESVISD IQGCSLQLCQ LANSLLPSLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAATT TCTCCCCGAG TACTTTGCTC AACAGTATCT CACATCTTAG CGTCTTAACT 60
TCTGATGGCT CTACCGCAAG ACCCAAACCT ATTCAGAAGT ACTGCCAAAA TGTATGTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	85.10	0.00e+00	1332.00
IUUC-Atr-002793	Amborella trichopoda	51.10	0.00e+00	735.00
IUUC-Aly-006261	Arabidopsis lyrata	73.67	4.00e-141	494.00
IUUC-Ago-007854	Ashbya gossypii	33.65	4.00e-17	82.00
IUUC-Ang-009574	Aspergillus niger	28.11	9.00e-19	87.80
IUUC-Bol-015762	Brassica oleracea	71.87	7.00e-137	480.00
IUUC-Bra-018049	Brassica rapa	48.41	0.00e+00	661.00
IUUC-Cgl-026537	Colletotrichum gloeosporioides	29.58	9.00e-19	87.40
IUUC-Fox-037811	Fusarium oxysporum	31.37	7.00e-19	87.80
IUUC-Gma-043920	Glycine max	52.45	0.00e+00	708.00
IUUC-Hvu-047089	Hordeum vulgare	86.30	0.00e+00	1406.00
IUUC-Kpa-049403	Komagataella pastoris	33.95	2.00e-20	93.60
IUUC-Lpe-051326	Leersia perrieri	82.73	0.00e+00	1290.00
IUUC-Mor-056956	Magnaporthe oryzae	29.32	5.00e-18	85.10
IUUC-Mtr-057910	Medicago truncatula	54.01	0.00e+00	715.00
IUUC-Mla-058925	Melampsora laricipopulina	31.21	4.00e-14	72.00
IUUC-Mac-064791	Musa acuminata	84.78	5.00e-142	497.00
IUUC-Ncr-068835	Neurospora crassa	29.39	4.00e-17	82.40
IUUC-Oba-075484	Oryza barthii	82.45	0.00e+00	1253.00
IUUC-Obr-076317	Oryza brachyantha	82.93	0.00e+00	1272.00
IUUC-Ogl-077857	Oryza glaberrima	82.45	0.00e+00	1256.00
IUUC-Ogu-078826	Oryza glumaepatula	82.45	0.00e+00	1257.00
IUUC-Oin-079538	Oryza indica	82.45	0.00e+00	1257.00
IUUC-Olo-080425	Oryza longistaminata	81.02	0.00e+00	1224.00
IUUC-Ome-081524	Oryza meridionalis	82.45	0.00e+00	1259.00
IUUC-Oni-082077	Oryza nivara	82.45	0.00e+00	1254.00
IUUC-Opu-083165	Oryza punctata	83.87	0.00e+00	1283.00
IUUC-Oru-085180	Oryza rufipogon	82.33	0.00e+00	1273.00
IUUC-Osa-085315	Oryza sativa	82.45	0.00e+00	1275.00
IUUC-Pno-095110	Phaeosphaeria nodorum	29.72	2.00e-20	93.20
IUUC-Ppa-095522	Physcomitrella patens	65.94	3.00e-112	398.00
IUUC-Ppe-101535	Prunus persica	70.71	5.00e-110	391.00
IUUC-Pte-104314	Pyrenophora teres	29.72	2.00e-20	93.20
IUUC-Sja-107762	Schizosaccharomyces japonicus	28.33	2.00e-17	83.20
IUUC-Spo-108349	Schizosaccharomyces pombe	28.39	9.00e-17	80.90
IUUC-Ssl-108596	Sclerotinia sclerotiorum	30.42	2.00e-19	89.70
IUUC-Smo-108857	Selaginella moellendorffii	60.63	1.00e-87	317.00
IUUC-Sit-110349	Setaria italica	81.77	0.00e+00	1289.00
IUUC-Stu-112751	Solanum tuberosum	51.53	0.00e+00	739.00
IUUC-Sbi-114085	Sorghum bicolor	80.34	0.00e+00	1190.00
IUUC-Tca-121129	Theobroma cacao	56.20	0.00e+00	802.00
IUUC-Tre-122117	Trichoderma reesei	29.58	6.00e-19	88.20
IUUC-Tvi-122426	Trichoderma virens	31.37	2.00e-18	86.70
IUUC-Tae-125641	Triticum aestivum	87.62	0.00e+00	1391.00
IUUC-Tur-126525	Triticum urartu	79.89	0.00e+00	1309.00
IUUC-Vvi-131364	Vitis vinifera	52.33	0.00e+00	722.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence