iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043061

Ensembl Protein ID

GLYMA18G03340.1

UniProt Accession

C6TC72; I1MZ45; C6TC72_SOYBN

Genbank Protein ID

ACU19424.1; KRG97767.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Genbank Nucleotide ID

BT095151; CM000851

Gene Name

LOC100811797; GLYMA_18G029500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G03340	GLYMA18G03340.1	GLYMA18G03340.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	41.06	4.00e-48	189.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Glycine max

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAASDRTVLQ FSSSSSSSSQ ILSAKVHPLV IFNICDCYVR RPDQADRVIG TLLGSVLPDG 60
TVDIRNSYAV PHNESIEQVA LDIEYHHNML ISHQKVNPKE IIVGWYSTGL GVTGGSALIH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAATATT GATAAGCCCA TGTGTAAAAC CCTAGTATCA GATTAGGGTG CTTGTGTTGT 60
GTTGTTCGCA CGCCTTGTTC GGTGAAGTGA GTAGTGAGTG CTGAATCGAA TCGAATCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0006413--P:translational initiation

KEGG

gmx:100811797

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	66.78	4.00e-104	371.00
IUUC-Aml-001527	Ailuropoda melanoleuca	41.06	2.00e-56	212.00
IUUC-Atr-002686	Amborella trichopoda	72.47	1.00e-108	385.00
IUUC-Apl-003977	Anas platyrhynchos	39.55	8.00e-44	169.00
IUUC-Aca-004335	Anolis carolinensis	40.38	1.00e-56	213.00
IUUC-Aly-005945	Arabidopsis lyrata	77.32	1.00e-121	428.00
IUUC-Ath-007045	Arabidopsis thaliana	75.95	6.00e-119	419.00
IUUC-Acl-008365	Aspergillus clavatus	35.74	2.00e-41	162.00
IUUC-Afl-008742	Aspergillus flavus	36.10	3.00e-41	162.00
IUUC-Afu-009030	Aspergillus fumigatus	37.05	4.00e-42	165.00
IUUC-Ani-009212	Aspergillus nidulans	35.38	1.00e-40	160.00
IUUC-Ang-009712	Aspergillus niger	35.74	2.00e-40	159.00
IUUC-Aor-009885	Aspergillus oryzae	36.46	1.00e-42	166.00
IUUC-Ate-010315	Aspergillus terreus	35.02	1.00e-39	156.00
IUUC-Ame-010801	Astyanax mexicanus	30.68	4.00e-23	101.00
IUUC-Bgr-011982	Blumeria graminis	35.59	9.00e-40	157.00
IUUC-Bta-012804	Bos taurus	41.06	4.00e-56	211.00
IUUC-Bci-013891	Botrytis cinerea	33.22	2.00e-33	136.00
IUUC-Bdi-014328	Brachypodium distachyon	72.93	7.00e-107	380.00
IUUC-Bol-015446	Brassica oleracea	78.01	1.00e-125	442.00
IUUC-Bra-016862	Brassica rapa	77.32	1.00e-124	439.00
IUUC-Cel-018171	Caenorhabditis elegans	27.05	1.00e-25	109.00
IUUC-Cja-019335	Callithrix jacchus	41.06	3.00e-56	212.00
IUUC-Cfa-020138	Canis familiaris	40.68	6.00e-56	211.00
IUUC-Cpo-022109	Cavia porcellus	37.78	1.00e-45	176.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	41.45	1.00e-58	219.00
IUUC-Csa-023994	Chlorocebus sabaeus	41.06	3.00e-56	212.00
IUUC-Cho-024351	Choloepus hoffmanni	36.95	6.00e-33	134.00
IUUC-Cin-025801	Ciona intestinalis	39.02	3.00e-51	195.00
IUUC-Csv-025805	Ciona savignyi	39.77	4.00e-51	194.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	31.43	2.00e-32	132.00
IUUC-Cne-026868	Cryptococcus neoformans	34.69	4.00e-28	118.00
IUUC-Cme-027328	Cyanidioschyzon merolae	27.39	4.00e-19	88.60
IUUC-Dre-028085	Danio rerio	39.92	7.00e-56	210.00
IUUC-Dno-030099	Dasypus novemcinctus	41.06	4.00e-56	211.00
IUUC-Dor-030324	Dipodomys ordii	37.26	1.00e-46	179.00
IUUC-Dse-031314	Dothistroma septosporum	36.30	4.00e-41	161.00
IUUC-Dme-031926	Drosophila melanogaster	38.52	4.00e-48	184.00
IUUC-Ete-032569	Echinops telfairi	40.23	4.00e-52	197.00
IUUC-Eca-033502	Equus caballus	38.78	7.00e-50	191.00
IUUC-Eeu-034883	Erinaceus europaeus	33.52	5.00e-25	107.00
IUUC-Fca-035873	Felis catus	41.06	2.00e-56	212.00
IUUC-Fal-036921	Ficedula albicollis	40.68	8.00e-55	206.00
IUUC-Fox-037765	Fusarium oxysporum	30.96	7.00e-27	114.00
IUUC-Fso-038240	Fusarium solani	31.32	8.00e-28	117.00
IUUC-Gmo-038864	Gadus morhua	39.25	2.00e-55	209.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.89	3.00e-26	112.00
IUUC-Gga-040952	Gallus gallus	40.68	1.00e-54	206.00
IUUC-Gac-041677	Gasterosteus aculeatus	41.44	1.00e-58	219.00
IUUC-Ggo-045591	Gorilla gorilla	41.06	3.00e-56	212.00
IUUC-Hsa-046860	Homo sapiens	41.06	3.00e-56	212.00
IUUC-Hvu-047410	Hordeum vulgare	71.62	6.00e-60	222.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	41.44	7.00e-57	214.00
IUUC-Lch-049410	Latimeria chalumnae	39.41	6.00e-36	143.00
IUUC-Lpe-051102	Leersia perrieri	76.74	3.00e-110	390.00
IUUC-Loc-052016	Lepisosteus oculatus	37.45	1.00e-44	172.00
IUUC-Lma-053157	Leptosphaeria maculans	34.89	3.00e-42	165.00
IUUC-Laf-054568	Loxodonta africana	41.06	5.00e-56	211.00
IUUC-Mcc-054613	Macaca mulatta	41.06	2.00e-56	212.00
IUUC-Mor-057104	Magnaporthe oryzae	30.85	6.00e-28	118.00
IUUC-Mtr-058445	Medicago truncatula	90.66	7.00e-147	512.00
IUUC-Mla-059038	Melampsora laricipopulina	30.00	2.00e-30	126.00
IUUC-Mga-059548	Meleagris gallopavo	39.65	3.00e-46	177.00
IUUC-Mvi-060520	Microbotryum violaceum	28.94	5.00e-19	88.60
IUUC-Mdo-062376	Monodelphis domestica	39.54	2.00e-54	206.00
IUUC-Mmu-063254	Mus musculus	41.06	2.00e-56	212.00
IUUC-Mac-065635	Musa acuminata	68.09	2.00e-106	378.00
IUUC-Mpu-066314	Mustela putorius furo	41.06	2.00e-56	212.00
IUUC-Mlu-067512	Myotis lucifugus	41.06	1.00e-56	213.00
IUUC-Nfi-068262	Neosartorya fischeri	37.05	4.00e-42	165.00
IUUC-Ncr-068872	Neurospora crassa	30.14	1.00e-29	123.00
IUUC-Nle-070118	Nomascus leucogenys	41.06	2.00e-56	212.00
IUUC-Opr-071228	Ochotona princeps	40.09	4.00e-48	184.00
IUUC-Ont-072600	Oreochromis niloticus	39.92	2.00e-57	215.00
IUUC-Oan-073584	Ornithorhynchus anatinus	38.77	4.00e-47	181.00
IUUC-Ocu-074542	Oryctolagus cuniculus	41.06	7.00e-57	214.00
IUUC-Oba-075923	Oryza barthii	74.74	2.00e-114	405.00
IUUC-Obr-076313	Oryza brachyantha	77.13	3.00e-109	387.00
IUUC-Ogl-076932	Oryza glaberrima	74.74	2.00e-114	405.00
IUUC-Ogu-078152	Oryza glumaepatula	74.74	2.00e-114	405.00
IUUC-Oin-079528	Oryza indica	74.74	2.00e-114	405.00
IUUC-Olo-080401	Oryza longistaminata	74.74	2.00e-114	405.00
IUUC-Ome-081553	Oryza meridionalis	74.39	3.00e-114	404.00
IUUC-Oni-082090	Oryza nivara	74.74	9.00e-115	405.00
IUUC-Opu-083583	Oryza punctata	79.07	9.00e-112	395.00
IUUC-Oru-084492	Oryza rufipogon	74.74	2.00e-114	405.00
IUUC-Osa-085383	Oryza sativa	74.74	2.00e-114	405.00
IUUC-Ola-086835	Oryzias latipes	40.30	1.00e-57	216.00
IUUC-Olu-087716	Ostreococcus lucimarinus	37.08	2.00e-41	162.00
IUUC-Oga-088886	Otolemur garnettii	41.44	5.00e-57	214.00
IUUC-Oar-090079	Ovis aries	41.06	3.00e-56	212.00
IUUC-Ptr-091457	Pan troglodytes	41.06	3.00e-56	212.00
IUUC-Pan-092317	Papio anubis	37.91	7.00e-32	130.00
IUUC-Psi-093129	Pelodiscus sinensis	38.04	1.00e-47	183.00
IUUC-Pma-094488	Petromyzon marinus	41.44	9.00e-58	216.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.84	4.00e-44	171.00
IUUC-Ppa-095341	Physcomitrella patens	60.90	1.00e-96	346.00
IUUC-Pfo-096286	Poecilia formosa	39.16	2.00e-56	212.00
IUUC-Pab-097765	Pongo abelii	41.06	3.00e-56	212.00
IUUC-Pop-099131	Populus trichocarpa	86.11	7.00e-132	462.00
IUUC-Pca-100524	Procavia capensis	32.74	2.00e-31	129.00
IUUC-Ppe-101934	Prunus persica	83.04	1.00e-135	475.00
IUUC-Pva-102577	Pteropus vampyrus	41.44	5.00e-57	214.00
IUUC-Pgr-103521	Puccinia graminis	33.73	7.00e-33	134.00
IUUC-Pte-104304	Pyrenophora teres	36.20	1.00e-44	173.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	36.20	2.00e-44	172.00
IUUC-Rno-105717	Rattus norvegicus	41.44	5.00e-57	214.00
IUUC-Sha-107190	Sarcophilus harrisii	39.38	4.00e-52	198.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	32.97	1.00e-36	147.00
IUUC-Spo-108355	Schizosaccharomyces pombe	34.64	3.00e-38	152.00
IUUC-Smo-109374	Selaginella moellendorffii	65.41	1.00e-105	375.00
IUUC-Sit-110119	Setaria italica	76.23	2.00e-113	401.00
IUUC-Sly-111570	Solanum lycopersicum	79.93	5.00e-114	403.00
IUUC-Stu-112308	Solanum tuberosum	78.20	1.00e-122	432.00
IUUC-Sar-113515	Sorex araneus	46.43	2.00e-17	82.00
IUUC-Sbi-114605	Sorghum bicolor	75.09	2.00e-111	395.00
IUUC-Sre-114906	Sporisorium reilianum	34.96	6.00e-39	154.00
IUUC-Tgu-117087	Taeniopygia guttata	40.09	4.00e-46	177.00
IUUC-Tru-117700	Takifugu rubripes	41.83	7.00e-60	223.00
IUUC-Tni-120470	Tetraodon nigroviridis	40.30	1.00e-57	216.00
IUUC-Tca-121109	Theobroma cacao	84.08	8.00e-124	436.00
IUUC-Tre-122095	Trichoderma reesei	31.56	4.00e-28	118.00
IUUC-Tvi-122580	Trichoderma virens	31.21	2.00e-27	116.00
IUUC-Tae-125129	Triticum aestivum	73.68	5.00e-110	390.00
IUUC-Tur-126658	Triticum urartu	65.44	2.00e-99	355.00
IUUC-Tme-127043	Tuber melanosporum	34.66	5.00e-40	158.00
IUUC-Tbe-127927	Tupaia belangeri	41.06	2.00e-56	212.00
IUUC-Ttr-129231	Tursiops truncatus	41.06	2.00e-56	212.00
IUUC-Uma-129578	Ustilago maydis	35.58	5.00e-38	151.00
IUUC-Vda-129730	Verticillium dahliae	31.79	3.00e-31	129.00
IUUC-Vvi-130968	Vitis vinifera	82.29	1.00e-127	449.00
IUUC-Xtr-132203	Xenopus tropicalis	39.16	2.00e-52	199.00
IUUC-Xma-133972	Xiphophorus maculatus	39.16	1.00e-56	212.00
IUUC-Yli-134553	Yarrowia lipolytica	32.09	8.00e-30	124.00
IUUC-Zma-134941	Zea mays	73.96	3.00e-102	364.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence